| 1 |
Instructions for setting up a cube-sphere integration with sea-ice. |
Instructions for setting up a cube-sphere integration with sea-ice. |
| 2 |
Date last tested: March 28, 2004. |
Date last updated: June 10, 2006 |
| 3 |
Code and input used for integrating cube5. |
216-CPU code and input used for integrating cube37. |
| 4 |
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| 5 |
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| 6 |
########################################################################## |
########################################################################## |
| 11 |
cvs co MITgcm_contrib/high_res_cube/code-mods |
cvs co MITgcm_contrib/high_res_cube/code-mods |
| 12 |
cvs co MITgcm_contrib/high_res_cube/input |
cvs co MITgcm_contrib/high_res_cube/input |
| 13 |
cvs co MITgcm_contrib/high_res_cube/results |
cvs co MITgcm_contrib/high_res_cube/results |
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cvs co MITgcm_contrib/edge_problem |
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| 14 |
cvs co MITgcm_code |
cvs co MITgcm_code |
| 15 |
cvs co MITgcm/verification/global_ocean.cs32x15 |
cvs co MITgcm/verification/global_ocean.cs32x15 |
| 16 |
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| 41 |
to use matlab to look at the output |
to use matlab to look at the output |
| 42 |
matlab |
matlab |
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| 44 |
for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'} |
for fld={'VICEtave','UICEtave','HEFFtave','AREAtave','QSWtave', ... |
| 45 |
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'QNETtave','FVtave','FUtave','EmPmRtave'} |
| 46 |
tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]); |
tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]); |
| 47 |
cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause |
cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause |
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end |
end |
| 49 |
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| 50 |
heff=permute(readbin(['HEFF.0000000020.data'],[32,6,32]),[1 3 2]); |
heff=permute(readbin(['HEFFtave.0000000020.data'],[32,6,32]),[1 3 2]); |
| 51 |
mask=0*heff; mask(find(heff>.001))=1; |
mask=0*heff; mask(find(heff>.001))=1; |
| 52 |
uice=mask.*permute(readbin(['UICE.0000000020.data'],[32,6,32]),[1 3 2]); |
uice=mask.*permute(readbin(['UICEtave.0000000020.data'],[32,6,32]),[1 3 2]); |
| 53 |
vice=mask.*permute(readbin(['VICE.0000000020.data'],[32,6,32]),[1 3 2]); |
vice=mask.*permute(readbin(['VICEtave.0000000020.data'],[32,6,32]),[1 3 2]); |
| 54 |
clf |
clf |
| 55 |
subplot(221), mypcolor(uice(:,:,3)'), colorbar, title('uice, tile 3') |
subplot(221), mypcolor(uice(:,:,3)'); colorbar, title('uice, tile 3') |
| 56 |
subplot(222), mypcolor(uice(:,:,6)'), colorbar, title('uice, tile 6') |
subplot(222), mypcolor(uice(:,:,6)'); colorbar, title('uice, tile 6') |
| 57 |
subplot(223), mypcolor(vice(:,:,3)'), colorbar, title('vice, tile 3') |
subplot(223), mypcolor(vice(:,:,3)'); colorbar, title('vice, tile 3') |
| 58 |
subplot(224), mypcolor(vice(:,:,6)'), colorbar, title('vice, tile 6') |
subplot(224), mypcolor(vice(:,:,6)'); colorbar, title('vice, tile 6') |
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########################################################################## |
########################################################################## |
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\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
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../build/mitgcmuv >& output.txt |
../build/mitgcmuv >& output.txt |
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comparison output is in: |
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../../../../MITgcm_contrib/high_res_cube/results/output.txt |
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to use matlab to look at the output |
########################################################################## |
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matlab |
########################################################################## |
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# 32*32*6*15, 2-cpu cube sphere on the altices with ifort |
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for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'} |
cd MITgcm/verification/global_ocean.cs32x15/code |
| 87 |
tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]); |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
| 88 |
cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause |
\cp ../../../utils/exch2/code-mods/s12t_16x32/* . |
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end |
\cp SIZE.h_mpi SIZE.h |
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heff=permute(readbin(['HEFF.0000000020.data'],[32,6,32]),[1 3 2]); |
cd ../build |
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mask=0*heff; mask(find(heff>.001))=1; |
\rm * |
| 93 |
uice=mask.*permute(readbin(['UICE.0000000020.data'],[32,6,32]),[1 3 2]); |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
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vice=mask.*permute(readbin(['VICE.0000000020.data'],[32,6,32]),[1 3 2]); |
make depend |
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clf |
make -j |
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subplot(221), mypcolor(uice(:,:,3)'), colorbar, title('uice, tile 3') |
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subplot(222), mypcolor(uice(:,:,6)'), colorbar, title('uice, tile 6') |
cd .. |
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subplot(223), mypcolor(vice(:,:,3)'), colorbar, title('vice, tile 3') |
mkdir run |
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subplot(224), mypcolor(vice(:,:,6)'), colorbar, title('vice, tile 6') |
cd run |
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\rm * |
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\cp ../input/* . |
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\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
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mpirun -np 2 ../build/mitgcmuv |
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########################################################################## |
########################################################################## |
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########################################################################## |
########################################################################## |
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# 32*32*6*15, 2-cpu cube sphere on the altices with efc |
# 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc |
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# starting with pickup file from end of 1992 |
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# requires input files in sudirectories run_template and ncep_rgau |
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cd MITgcm/verification/global_ocean.cs32x15/code |
cd MITgcm/verification/global_ocean.cs32x15/code |
| 113 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
| 114 |
\cp ../../../utils/exch2/code-mods/s12t_16x32/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* . |
| 115 |
\cp SIZE.h_mpi SIZE.h |
\cp packages.conf_hr packages.conf |
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cd ../build |
cd ../build |
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\rm * |
\rm * |
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../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
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make depend |
make depend |
| 121 |
make |
make -j |
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cd .. |
cd .. |
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mkdir run |
mkdir run |
| 126 |
\rm * |
\rm * |
| 127 |
\cp ../input/* . |
\cp ../input/* . |
| 128 |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
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mpirun -np 2 ../build/mitgcmuv |
qsub job_altix92_54t |
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########################################################################## |
########################################################################## |
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########################################################################## |
########################################################################## |
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# 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc |
# 510*510*6*50, 216-cpu cube sphere on altix with ifort and pkg/diagnostics |
| 135 |
# requires input files in sudirectories run_template and ncep_rgau |
# requires input files in sudirectories run_template and ncep_rgau |
| 136 |
# presently residing under orion:/tmp1/dmenem/cube |
# these can be obained from lou:/u/menemenl/cube |
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| 138 |
cd MITgcm/verification/global_ocean.cs32x15/code |
cd MITgcm/verification/global_ocean.cs32x15/code |
| 139 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
| 140 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* . |
| 141 |
\cp SIZE.h_54 SIZE.h |
\cp SIZE.h_216 SIZE.h |
| 142 |
\cp packages.conf_hr packages.conf |
\cp packages.conf_hr packages.conf |
| 143 |
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| 144 |
cd ../build |
cd ../build |
| 145 |
\rm * |
\rm * |
| 146 |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
| 147 |
make depend |
make depend |
| 148 |
make |
make -j |
| 149 |
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| 150 |
cd .. |
cd .. |
| 151 |
mkdir run |
mkdir run |
| 153 |
\rm * |
\rm * |
| 154 |
\cp ../input/* . |
\cp ../input/* . |
| 155 |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
| 156 |
qsub job_orion |
ln -sf ../../../../run_template/* . |
| 157 |
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\rm pickup* data.pkg data.seaice data.exf_clim data.exf data |
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\rm *192_94* *cs32* *.m lev* tren* job_c* job_altix150 job_altix92_54t |
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ln -sf ../../../../run_template/pickup.0000000216.cube27 pickup.0000000216 |
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ln -sf ../../../../run_template/pickup_seaice.0000000216.cube27 pickup_seaice.0000000216 |
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\cp ../build/mitgcmuv . |
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qsub job_altix |
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########################################################################## |
########################################################################## |
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########################################################################## |
########################################################################## |
| 167 |
# 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc |
# 510*510*6*50, 1500-tile, 150-cpu, excludes land |
| 168 |
# starting with pickup file from end of 1992 |
# uses s1500t_17x51 configuration |
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# requires input files in sudirectories run_template and ncep_rgau |
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# presently residing under orion:/tmp1/dmenem/cube |
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| 170 |
cd MITgcm/verification/global_ocean.cs32x15/code |
cd MITgcm/verification/global_ocean.cs32x15/code |
| 171 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
| 172 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* . |
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\cp SIZE.h_150 SIZE.h |
| 174 |
\cp packages.conf_hr packages.conf |
\cp packages.conf_hr packages.conf |
| 175 |
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| 176 |
cd ../build |
cd ../build |
| 177 |
\rm * |
\rm * |
| 178 |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
| 179 |
make depend |
make depend |
| 180 |
make |
make -j |
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| 182 |
cd .. |
cd .. |
| 183 |
mkdir run |
mkdir run |
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\rm * |
\rm * |
| 186 |
\cp ../input/* . |
\cp ../input/* . |
| 187 |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
| 188 |
qsub job_altix93_newIO |
ln -sf ../../../../run_template/* . |
| 189 |
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\rm pickup* |
| 190 |
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ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216 |
| 191 |
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ln -sf ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216 |
| 192 |
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\cp ../build/mitgcmuv mitgcmuv150 |
| 193 |
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qsub job_altix150 |
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########################################################################## |
########################################################################## |
| 199 |
########################################################################## |
########################################################################## |
| 200 |
# 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc |
# 510*510*6*50, 1500-tile, 375-cpu, excludes land |
| 201 |
# requires input files in sudirectories run_template and ncep_rgau |
# uses s1500t_17x51 configuration |
| 202 |
# presently residing under orion:/tmp1/dmenem/cube |
# example for running on c17-c20 using arrayd |
| 203 |
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| 204 |
cd MITgcm/verification/global_ocean.cs32x15/code |
cd MITgcm/verification/global_ocean.cs32x15/code |
| 205 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
| 206 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* . |
| 207 |
\cp SIZE.h_41 SIZE.h |
\cp SIZE.h_375 SIZE.h |
| 208 |
\cp packages.conf_hr packages.conf |
\cp packages.conf_hr packages.conf |
| 209 |
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| 210 |
cd ../build |
cd ../build |
| 211 |
\rm * |
\rm * |
| 212 |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
| 213 |
make depend |
make depend |
| 214 |
make |
make -j |
| 215 |
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| 216 |
cd .. |
cd .. |
| 217 |
mkdir run |
mkdir run |
| 219 |
\rm * |
\rm * |
| 220 |
\cp ../input/* . |
\cp ../input/* . |
| 221 |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
| 222 |
qsub job_orion41 |
ln -sf ../../../../run_template/* . |
| 223 |
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\rm pickup* |
| 224 |
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ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216 |
| 225 |
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ln -sf ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216 |
| 226 |
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\cp ../build/mitgcmuv . |
| 227 |
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job_c20_375cpu < /dev/null >&! output.run & |
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########################################################################## |
########################################################################## |
| 241 |
########################################################################## |
########################################################################## |
| 242 |
# 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc |
# 510*510*6*50, 1500-tile, 375-cpu, excludes land |
| 243 |
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# uses s1500t_17x51 configuration |
| 244 |
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# example for running on c17-c20 using arrayd |
| 245 |
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| 246 |
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cd MITgcm/verification/global_ocean.cs32x15/code |
| 247 |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
| 248 |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* . |
| 249 |
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\cp SIZE.h_375 SIZE.h |
| 250 |
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\cp packages.conf_hr packages.conf |
| 251 |
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| 252 |
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cd ../build |
| 253 |
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\rm * |
| 254 |
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../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
| 255 |
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make depend |
| 256 |
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make -j |
| 257 |
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| 258 |
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cd .. |
| 259 |
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mkdir run |
| 260 |
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cd run |
| 261 |
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\rm * |
| 262 |
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\cp ../input/* . |
| 263 |
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\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
| 264 |
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ln -sf ../../../../run_template/* . |
| 265 |
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\rm pickup* |
| 266 |
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ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216 |
| 267 |
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ln -sf ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216 |
| 268 |
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\cp ../build/mitgcmuv . |
| 269 |
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job_c20_375cpu < /dev/null >&! output.run & |
| 270 |
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| 272 |
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########################################################################## |
| 273 |
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########################################################################## |
| 274 |
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# 510*510*6*50, 1500-tile, 500-cpu, excludes land |
| 275 |
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# uses s1500t_17x51 configuration |
| 276 |
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# example for running on c17-c20 using arrayd |
| 277 |
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| 278 |
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cd MITgcm/verification/global_ocean.cs32x15/code |
| 279 |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
| 280 |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* . |
| 281 |
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\cp SIZE.h_500 SIZE.h |
| 282 |
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\cp packages.conf_hr packages.conf |
| 283 |
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| 284 |
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cd ../build |
| 285 |
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\rm * |
| 286 |
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../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas |
| 287 |
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make depend |
| 288 |
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make -j |
| 289 |
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| 290 |
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cd .. |
| 291 |
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mkdir run |
| 292 |
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cd run |
| 293 |
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\rm * |
| 294 |
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\cp ../input/* . |
| 295 |
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\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
| 296 |
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ln -sf ../../../../run_template/* . |
| 297 |
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\rm pickup* |
| 298 |
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ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216 |
| 299 |
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ln -sf ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216 |
| 300 |
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\cp ../build/mitgcmuv . |
| 301 |
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job_c19_500cpu < /dev/null >&! output.run & |
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########################################################################## |
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########################################################################## |
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# 510*510*6*50, 216-cpu cube sphere on cosmos |
| 310 |
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| 311 |
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cd MITgcm/verification/global_ocean.cs32x15/code |
| 312 |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
| 313 |
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\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* . |
| 314 |
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\cp SIZE.h_216 SIZE.h |
| 315 |
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\cp packages.conf_hr packages.conf |
| 316 |
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| 317 |
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module unload latest_intel80 |
| 318 |
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module unload mpich-gm-intel80 |
| 319 |
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module load latest_intel81 |
| 320 |
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module load mpich-gm-intel81 |
| 321 |
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| 322 |
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cd ../build |
| 323 |
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\rm * |
| 324 |
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../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia32_ifort+mpi_cosmos |
| 325 |
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make depend |
| 326 |
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make -j |
| 327 |
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| 328 |
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cd .. |
| 329 |
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mkdir run |
| 330 |
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cd run |
| 331 |
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\rm * |
| 332 |
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\cp ../input/* . |
| 333 |
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\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
| 334 |
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ln -sf ../../../../run_template/* . |
| 335 |
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\rm pickup* |
| 336 |
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ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216 |
| 337 |
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ln -sf ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216 |
| 338 |
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\cp ../build/mitgcmuv . |
| 339 |
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bsub < job_cosmos |
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| 360 |
|
########################################################################## |
| 361 |
|
########################################################################## |
| 362 |
|
# 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc |
| 363 |
# requires input files in sudirectories run_template and ncep_rgau |
# requires input files in sudirectories run_template and ncep_rgau |
| 364 |
# presently residing under orion:/tmp1/dmenem/cube |
# presently residing under orion:/tmp1/dmenem/cube |
| 365 |
|
|
| 366 |
cd MITgcm/verification/global_ocean.cs32x15/code |
cd MITgcm/verification/global_ocean.cs32x15/code |
| 367 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
| 368 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* . |
| 369 |
\cp SIZE.h_50 SIZE.h |
\cp SIZE.h_54 SIZE.h |
| 370 |
\cp packages.conf_hr packages.conf |
\cp packages.conf_hr packages.conf |
| 371 |
|
|
| 372 |
cd ../build |
cd ../build |
| 373 |
\rm * |
\rm * |
| 374 |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
| 375 |
make depend |
make depend |
| 376 |
make |
make -j |
| 377 |
|
|
| 378 |
cd .. |
cd .. |
| 379 |
mkdir run |
mkdir run |
| 386 |
|
|
| 387 |
########################################################################## |
########################################################################## |
| 388 |
########################################################################## |
########################################################################## |
| 389 |
# 510*510*6*50, 216-cpu cube sphere on altix with efc |
# 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc |
| 390 |
# requires input files in sudirectories run_template and ncep_rgau |
# requires input files in sudirectories run_template and ncep_rgau |
| 391 |
# these can be obained from lou:/u/menemenl/cube |
# presently residing under orion:/tmp1/dmenem/cube |
| 392 |
|
|
| 393 |
cd MITgcm/verification/global_ocean.cs32x15/code |
cd MITgcm/verification/global_ocean.cs32x15/code |
| 394 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
| 395 |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* . |
| 396 |
\cp SIZE.h_216 SIZE.h |
\cp SIZE.h_41 SIZE.h |
| 397 |
\cp packages.conf_hr packages.conf |
\cp packages.conf_hr packages.conf |
| 398 |
|
|
| 399 |
cd ../build |
cd ../build |
| 400 |
\rm * |
\rm * |
| 401 |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
| 402 |
make depend |
make depend |
| 403 |
make |
make -j |
| 404 |
|
|
| 405 |
cd .. |
cd .. |
| 406 |
mkdir run |
mkdir run |
| 408 |
\rm * |
\rm * |
| 409 |
\cp ../input/* . |
\cp ../input/* . |
| 410 |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
| 411 |
qsub job_altix |
qsub job_orion41 |
| 412 |
|
|
| 413 |
|
|
| 414 |
########################################################################## |
########################################################################## |
| 415 |
########################################################################## |
########################################################################## |
| 416 |
# matlab script for generating pChkptFreq |
# 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc |
| 417 |
|
# requires input files in sudirectories run_template and ncep_rgau |
| 418 |
|
# presently residing under orion:/tmp1/dmenem/cube |
| 419 |
|
|
| 420 |
nTimeSteps=26352; |
cd MITgcm/verification/global_ocean.cs32x15/code |
| 421 |
for niter0=216:26352:(26352*12) |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* . |
| 422 |
pChkptFreq=(niter0+nTimeSteps)*1200; |
\cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* . |
| 423 |
day=pChkptFreq/24/60/60; |
\cp SIZE.h_50 SIZE.h |
| 424 |
disp(['niter0=' int2str(niter0) ',day=' int2str(day) ', ' ... |
\cp packages.conf_hr packages.conf |
|
datestr(datenum(1992,1,1)+day) ', pChkptFreq=' int2str(pChkptFreq)]) |
|
|
end |
|
| 425 |
|
|
| 426 |
niter0 = 216 , day = 369 , 04-Jan-1993, pChkptFreq = 31881600 |
cd ../build |
| 427 |
niter0 = 26568 , day = 735 , 05-Jan-1994, pChkptFreq = 63504000 |
\rm * |
| 428 |
niter0 = 52920 , day = 1101, 06-Jan-1995, pChkptFreq = 95126400 |
../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix |
| 429 |
niter0 = 79272 , day = 1467, 07-Jan-1996, pChkptFreq = 126748800 |
make depend |
| 430 |
niter0 = 105624, day = 1833, 07-Jan-1997, pChkptFreq = 158371200 |
make -j |
| 431 |
niter0 = 131976, day = 2199, 08-Jan-1998, pChkptFreq = 189993600 |
|
| 432 |
niter0 = 158328, day = 2565, 09-Jan-1999, pChkptFreq = 221616000 |
cd .. |
| 433 |
niter0 = 184680, day = 2931, 10-Jan-2000, pChkptFreq = 253238400 |
mkdir run |
| 434 |
niter0 = 211032, day = 3297, 10-Jan-2001, pChkptFreq = 284860800 |
cd run |
| 435 |
niter0 = 237384, day = 3663, 11-Jan-2002, pChkptFreq = 316483200 |
\rm * |
| 436 |
niter0 = 263736, day = 4029, 12-Jan-2003, pChkptFreq = 348105600 |
\cp ../input/* . |
| 437 |
niter0 = 290088, day = 4395, 13-Jan-2004, pChkptFreq = 379728000 |
\cp ../../../../MITgcm_contrib/high_res_cube/input/* . |
| 438 |
|
qsub job_orion |