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Revision 1.26 - (hide annotations) (download)
Wed Feb 11 06:36:12 2004 UTC (21 years, 5 months ago) by dimitri
Branch: MAIN
CVS Tags: hrcube_3
Changes since 1.25: +9 -9 lines 
Modified high_res_cube/README_ice
1 dimitri 1.1 Instructions for setting up a cube-sphere integration with sea-ice.
2 dimitri 1.26 Date last tested: February 10, 2004.
3     This is the code used for cube3, the third 1992-2002 510x510x6
4 dimitri 1.14 cube-sphere integration.
5 dimitri 1.8
6    
7     ##########################################################################
8     ##########################################################################
9 dimitri 1.14 # getting the code from anonymous CVS server
10 dimitri 1.1
11     setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
12     cvs login ( CVS password: cvsanon )
13 dimitri 1.26 cvs co -r hrcube_3 MITgcm_contrib/high_res_cube/README_ice
14     cvs co -r hrcube_3 MITgcm_contrib/high_res_cube/code-mods
15     cvs co -r hrcube_3 MITgcm_contrib/high_res_cube/matlab-grid-converter
16     cvs co -r hrcube_3 MITgcm_contrib/high_res_cube/input
17     cvs co -r hrcube_3 MITgcm_contrib/high_res_cube/results
18     cvs co -r hrcube_3 MITgcm_code
19     cvs co -r hrcube_3 MITgcm/verification/global_ocean.cs32x15
20 dimitri 1.14
21    
22     ##########################################################################
23     ##########################################################################
24     # 32*32*6*15, 1-cpu cube sphere
25 dimitri 1.3
26 dimitri 1.1 cd MITgcm/verification/global_ocean.cs32x15/code
27 dimitri 1.8 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
28     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .
29 dimitri 1.3
30 dimitri 1.25 cd ../build
31 dimitri 1.10 ../../../tools/genmake2 -mods=../code
32 dimitri 1.1 make depend
33     make
34 dimitri 1.3
35 dimitri 1.1 cd ..
36     mkdir run
37     cd run
38 dimitri 1.8 \cp ../input/* .
39     \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .
40     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
41 dimitri 1.3 ../build/mitgcmuv >& output.txt
42    
43     comparison output is in:
44     ../../../../MITgcm_contrib/high_res_cube/results/output.txt
45    
46     to use matlab to look at the output
47     matlab
48 dimitri 1.17
49 dimitri 1.5 for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}
50 dimitri 1.13 tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);
51 dimitri 1.4 cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
52     end
53 dimitri 1.8
54 dimitri 1.17 heff=permute(readbin(['HEFF.0000000020.data'],[32,6,32]),[1 3 2]);
55     mask=0*heff; mask(find(heff>.001))=1;
56     uice=mask.*permute(readbin(['UICE.0000000020.data'],[32,6,32]),[1 3 2]);
57     vice=mask.*permute(readbin(['VICE.0000000020.data'],[32,6,32]),[1 3 2]);
58     clf
59     subplot(221), mypcolor(uice(:,:,3)'), colorbar, title('uice, tile 3')
60     subplot(222), mypcolor(uice(:,:,6)'), colorbar, title('uice, tile 6')
61     subplot(223), mypcolor(vice(:,:,3)'), colorbar, title('vice, tile 3')
62     subplot(224), mypcolor(vice(:,:,6)'), colorbar, title('vice, tile 6')
63    
64 dimitri 1.8
65     ##########################################################################
66     ##########################################################################
67     # 32*32*6*15, 2-cpu cube sphere on the altices with efc
68    
69     cd MITgcm/verification/global_ocean.cs32x15/code
70     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
71     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .
72     \cp SIZE.h_mpi SIZE.h
73    
74 dimitri 1.25 cd ../build
75 dimitri 1.14 \rm *
76 dimitri 1.10 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
77 dimitri 1.8 make depend
78     make
79    
80     cd ..
81     mkdir run
82     cd run
83 dimitri 1.14 \rm *
84 dimitri 1.8 \cp ../input/* .
85     \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .
86     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
87     mpirun -np 2 ../build/mitgcmuv
88    
89    
90     ##########################################################################
91     ##########################################################################
92 dimitri 1.9 # 510*510*6*50, 54-cpu cube sphere on the altices with efc
93 dimitri 1.14 # requires input files in sudirectories run_template and ncep_rgau
94     # presently residing under orion:/tmp1/dmenem/cube
95 dimitri 1.8
96     cd MITgcm/verification/global_ocean.cs32x15/code
97     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
98     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
99     \cp SIZE.h_54 SIZE.h
100 dimitri 1.11 \cp packages.conf_hr packages.conf
101 dimitri 1.23
102 dimitri 1.25 cd ../build
103 dimitri 1.23 \rm *
104     ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
105     make depend
106     make
107    
108     cd ..
109     mkdir run
110     cd run
111     \rm *
112     \cp ../input/* .
113     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
114     qsub job_orion
115    
116    
117     ##########################################################################
118     ##########################################################################
119     # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc
120     # requires input files in sudirectories run_template and ncep_rgau
121     # presently residing under orion:/tmp1/dmenem/cube
122    
123     cd MITgcm/verification/global_ocean.cs32x15/code
124     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
125     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .
126     \cp SIZE.h_41 SIZE.h
127     \cp packages.conf_hr packages.conf
128 dimitri 1.8
129 dimitri 1.25 cd ../build
130 dimitri 1.14 \rm *
131 dimitri 1.10 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
132 dimitri 1.8 make depend
133     make
134    
135     cd ..
136     mkdir run
137     cd run
138 dimitri 1.14 \rm *
139 dimitri 1.8 \cp ../input/* .
140     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
141 dimitri 1.24 qsub job_orion41
142 dimitri 1.9
143    
144     ##########################################################################
145     ##########################################################################
146 dimitri 1.13 # 510*510*6*50, 216-cpu cube sphere on altix with efc
147 dimitri 1.17 # requires input files in sudirectories run_template and ncep_rgau
148     # these can be obained from lou:/u/menemenl/cube
149 dimitri 1.9
150     cd MITgcm/verification/global_ocean.cs32x15/code
151     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
152     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
153     \cp SIZE.h_216 SIZE.h
154 dimitri 1.12 \cp packages.conf_hr packages.conf
155 dimitri 1.9
156 dimitri 1.25 cd ../build
157 dimitri 1.15 \rm *
158 dimitri 1.13 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
159 dimitri 1.9 make depend
160     make
161    
162     cd ..
163     mkdir run
164     cd run
165 dimitri 1.15 \rm *
166     \cp ../input/* .
167     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
168 dimitri 1.12 qsub job_altix
169 dimitri 1.17
170    
171     ##########################################################################
172     ##########################################################################
173     # matlab script for generating pChkptFreq
174    
175     nTimeSteps=26352;
176     for niter0=216:26352:(26352*11)
177     pChkptFreq=(niter0+nTimeSteps)*1200;
178     day=pChkptFreq/24/60/60;
179     disp(['niter0=' int2str(niter0) ',day=' int2str(day) ', ' ...
180     datestr(datenum(1992,1,1)+day) ', pChkptFreq=' int2str(pChkptFreq)])
181     end
182    
183     niter0 = 216 , day = 369 , 04-Jan-1993, pChkptFreq = 31881600
184     niter0 = 26568 , day = 735 , 05-Jan-1994, pChkptFreq = 63504000
185     niter0 = 52920 , day = 1101, 06-Jan-1995, pChkptFreq = 95126400
186     niter0 = 79272 , day = 1467, 07-Jan-1996, pChkptFreq = 126748800
187     niter0 = 105624, day = 1833, 07-Jan-1997, pChkptFreq = 158371200
188     niter0 = 131976, day = 2199, 08-Jan-1998, pChkptFreq = 189993600
189     niter0 = 158328, day = 2565, 09-Jan-1999, pChkptFreq = 221616000
190     niter0 = 184680, day = 2931, 10-Jan-2000, pChkptFreq = 253238400
191     niter0 = 211032, day = 3297, 10-Jan-2001, pChkptFreq = 284860800
192     niter0 = 237384, day = 3663, 11-Jan-2002, pChkptFreq = 316483200
193     niter0 = 263736, day = 4029, 12-Jan-2003, pChkptFreq = 348105600
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