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revision 1.40 by dimitri, Thu Jul 1 03:52:24 2004 UTC revision 1.75 by dimitri, Fri Nov 3 23:17:42 2006 UTC
# Line 1  Line 1 
1  Instructions for setting up a cube-sphere integration with sea-ice.  Instructions for setting up a cube-sphere integration with sea-ice.
2  Date last tested: March 28, 2004.  
3  Code and input used for integrating cube5.  =================
4    UPDATES
5    
6    November 3, 2006: 216-CPU code for cube43
7    Martin's growth.F routine and Patrick's pkg/seaice diagnostics
8    
9    October 15, 2006: 216-CPU code for cube40
10    
11    September 28, 2006: 216-CPU code for cube38
12    
13    September 4, 2006
14    Modified 32*32*6*15 experiments to use grid_cs32.* files from
15     verification/tutorial_held_suarez_cs/input instead of
16     tile* files from verification/global_ocean.cs32x15/input
17    
18    August 8, 2006: 216-CPU code and input used for cube37
19    using "June 10, 2006" MITgcm code.
20    
21    for online T/S profile diagnostics all that is needed is
22      profiles_init_fixed
23      profiles_inloop
24    see pkg/ecco/ecco_cost_init_fixed.F
25        pkg/ecco/cost_averagesfields.F
26    
27    
28  ##########################################################################  ##########################################################################
29  ##########################################################################  ##########################################################################
30  # getting the code from anonymous CVS server  # getting the code from anonymous CVS server
31    #
32    
33      bash or sh shell:
34        $ export CVSROOT=':pserver:cvsanon@mitgcm.org:/u/gcmpack'
35        $ cvs login
36          ( enter the CVS password: "cvsanon" )
37    
38      tcsh or csh shell:
39        $ setenv CVSROOT ':pserver:cvsanon@mitgcm.org:/u/gcmpack'
40        $ cvs login
41          ( enter the CVS password: "cvsanon" )
42    
43  cvs co MITgcm_contrib/high_res_cube/README_ice  cvs co MITgcm_contrib/high_res_cube/README_ice
44  cvs co MITgcm_contrib/high_res_cube/code-mods  cvs co MITgcm_contrib/high_res_cube/code-mods
45  cvs co MITgcm_contrib/high_res_cube/input  cvs co MITgcm_contrib/high_res_cube/input
46  cvs co MITgcm_contrib/high_res_cube/results  cvs co MITgcm_contrib/high_res_cube/results
 cvs co MITgcm_contrib/edge_problem  
47  cvs co MITgcm_code  cvs co MITgcm_code
48  cvs co MITgcm/verification/global_ocean.cs32x15  cvs co MITgcm/verification/global_ocean.cs32x15
49  cvs co MITgcm/verification/testreport  cvs co MITgcm/verification/tutorial_held_suarez_cs/input
50    
51    
52    ##########################################################################
53    ##########################################################################
54    # 510*510*6*50, 216-cpu cube sphere on altix with ifort and pkg/diagnostics
55    # requires input files in sudirectories run_template and ncep_rgau
56    # these can be obained from lou:/u/menemenl/cube
57    
58    cd MITgcm/verification/global_ocean.cs32x15/code
59    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
60    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
61    \cp SIZE.h_216 SIZE.h
62    \cp packages.conf_hr packages.conf
63    
64    cd ../build
65    \rm *
66    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
67    make depend
68    make -j
69    
70    cd ..
71    mkdir run
72    cd run
73    \rm *
74    \cp ../input/* .
75    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
76    ln -sf ../../../../run_template/* .
77    \rm pickup* eedata.mth data.pkg data.seaice data.exf_clim data.exf data.mnc data pr*
78    \rm bathy_Hmin50.bin *192_94* *cs32* *.m lev* tren* job_c* job_altix150 job_altix92_54t
79    ln -sf ../../../../run_template/pickup.0000000216.cube38 pickup.0000000216
80    ln -sf  ../../../../run_template/pickup_seaice.0000000216.cube38 pickup_seaice.0000000216
81    \cp ../build/mitgcmuv .
82    qsub job_altix
83    
84    
85  ##########################################################################  ##########################################################################
# Line 33  cd .. Line 98  cd ..
98  mkdir run  mkdir run
99  cd run  cd run
100  \rm *  \rm *
101    \cp ../../tutorial_held_suarez_cs/input/grid* .
102  \cp ../input/* .  \cp ../input/* .
103  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
104  ../build/mitgcmuv >& output.txt  ../build/mitgcmuv >& output.txt
# Line 43  comparison output is in: Line 109  comparison output is in:
109  to use matlab to look at the output  to use matlab to look at the output
110  matlab  matlab
111    
112  for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}  for fld={'VICEtave','UICEtave','HEFFtave','AREAtave','QSWtave', ...
113             'QNETtave','FVtave','FUtave','EmPmRtave'}
114      tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);      tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);
115      cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause      cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
116  end  end
117    
118  heff=permute(readbin(['HEFF.0000000020.data'],[32,6,32]),[1 3 2]);  heff=permute(readbin(['HEFFtave.0000000020.data'],[32,6,32]),[1 3 2]);
119  mask=0*heff; mask(find(heff>.001))=1;  mask=0*heff; mask(find(heff>.001))=1;
120  uice=mask.*permute(readbin(['UICE.0000000020.data'],[32,6,32]),[1 3 2]);  uice=mask.*permute(readbin(['UICEtave.0000000020.data'],[32,6,32]),[1 3 2]);
121  vice=mask.*permute(readbin(['VICE.0000000020.data'],[32,6,32]),[1 3 2]);  vice=mask.*permute(readbin(['VICEtave.0000000020.data'],[32,6,32]),[1 3 2]);
122  clf  clf
123  subplot(221), mypcolor(uice(:,:,3)'), colorbar, title('uice, tile 3')  subplot(221), mypcolor(uice(:,:,3)'); colorbar, title('uice, tile 3')
124  subplot(222), mypcolor(uice(:,:,6)'), colorbar, title('uice, tile 6')  subplot(222), mypcolor(uice(:,:,6)'); colorbar, title('uice, tile 6')
125  subplot(223), mypcolor(vice(:,:,3)'), colorbar, title('vice, tile 3')  subplot(223), mypcolor(vice(:,:,3)'); colorbar, title('vice, tile 3')
126  subplot(224), mypcolor(vice(:,:,6)'), colorbar, title('vice, tile 6')  subplot(224), mypcolor(vice(:,:,6)'); colorbar, title('vice, tile 6')
127    
128    
129  ##########################################################################  ##########################################################################
# Line 75  cd .. Line 142  cd ..
142  mkdir run  mkdir run
143  cd run  cd run
144  \rm *  \rm *
145    \cp ../../tutorial_held_suarez_cs/input/grid* .
146  \cp ../input/* .  \cp ../input/* .
147  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
148  ../build/mitgcmuv >& output.txt  ../build/mitgcmuv >& output.txt
149    
 comparison output is in:  
 ../../../../MITgcm_contrib/high_res_cube/results/output.txt  
   
 to use matlab to look at the output  
 matlab  
   
 for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}  
     tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);  
     cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause  
 end  
   
 heff=permute(readbin(['HEFF.0000000020.data'],[32,6,32]),[1 3 2]);  
 mask=0*heff; mask(find(heff>.001))=1;  
 uice=mask.*permute(readbin(['UICE.0000000020.data'],[32,6,32]),[1 3 2]);  
 vice=mask.*permute(readbin(['VICE.0000000020.data'],[32,6,32]),[1 3 2]);  
 clf  
 subplot(221), mypcolor(uice(:,:,3)'), colorbar, title('uice, tile 3')  
 subplot(222), mypcolor(uice(:,:,6)'), colorbar, title('uice, tile 6')  
 subplot(223), mypcolor(vice(:,:,3)'), colorbar, title('vice, tile 3')  
 subplot(224), mypcolor(vice(:,:,6)'), colorbar, title('vice, tile 6')  
   
150    
151  ##########################################################################  ##########################################################################
152  ##########################################################################  ##########################################################################
153  # 32*32*6*15, 2-cpu cube sphere on the altices with efc  # 32*32*6*15, 2-cpu cube sphere on the altices with ifort
154    
155  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
156  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
# Line 112  cd MITgcm/verification/global_ocean.cs32 Line 159  cd MITgcm/verification/global_ocean.cs32
159    
160  cd ../build  cd ../build
161  \rm *  \rm *
162  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
163  make depend  make depend
164  make  make -j
165    
166  cd ..  cd ..
167  mkdir run  mkdir run
168  cd run  cd run
169  \rm *  \rm *
170    \cp ../../tutorial_held_suarez_cs/input/grid* .
171  \cp ../input/* .  \cp ../input/* .
172  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
173  mpirun -np 2 ../build/mitgcmuv  mpirun -np 2 ../build/mitgcmuv
# Line 127  mpirun -np 2 ../build/mitgcmuv Line 175  mpirun -np 2 ../build/mitgcmuv
175    
176  ##########################################################################  ##########################################################################
177  ##########################################################################  ##########################################################################
178  # 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc  # 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc
179    # starting with pickup file from end of 1992
180  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
 # presently residing under orion:/tmp1/dmenem/cube  
181    
182  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
183  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
184  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .
 \cp SIZE.h_54 SIZE.h  
185  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
186    
187  cd ../build  cd ../build
188  \rm *  \rm *
189  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
190  make depend  make depend
191  make  make -j
192    
193  cd ..  cd ..
194  mkdir run  mkdir run
# Line 149  cd run Line 196  cd run
196  \rm *  \rm *
197  \cp ../input/* .  \cp ../input/* .
198  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
199  qsub job_orion  qsub job_altix92_54t
200    
201    
202  ##########################################################################  ##########################################################################
203  ##########################################################################  ##########################################################################
204  # 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc  # 510*510*6*50, 1500-tile, 150-cpu, excludes land
205  # starting with pickup file from end of 1992  # uses s1500t_17x51 configuration
 # requires input files in sudirectories run_template and ncep_rgau  
206    
207  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
208  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
209  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
210    \cp SIZE.h_150 SIZE.h
211  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
212    
213  cd ../build  cd ../build
214  \rm *  \rm *
215  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
216  make depend  make depend
217  make  make -j
218    
219  cd ..  cd ..
220  mkdir run  mkdir run
# Line 175  cd run Line 222  cd run
222  \rm *  \rm *
223  \cp ../input/* .  \cp ../input/* .
224  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
225  qsub job_altix93_newIO  ln -sf ../../../../run_template/* .
226    \rm pickup*
227    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
228    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
229    \cp ../build/mitgcmuv mitgcmuv150
230    qsub job_altix150
231    
232    
233  ##########################################################################  ##########################################################################
234  ##########################################################################  ##########################################################################
235  # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc  # 510*510*6*50, 1500-tile, 375-cpu, excludes land
236  # requires input files in sudirectories run_template and ncep_rgau  # uses s1500t_17x51 configuration
237  # presently residing under orion:/tmp1/dmenem/cube  # example for running on c17-c20 using arrayd
238    
239  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
240  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
241  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
242  \cp SIZE.h_41 SIZE.h  \cp SIZE.h_375 SIZE.h
243  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
244    
245  cd ../build  cd ../build
246  \rm *  \rm *
247  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
248  make depend  make depend
249  make  make -j
250    
251  cd ..  cd ..
252  mkdir run  mkdir run
# Line 202  cd run Line 254  cd run
254  \rm *  \rm *
255  \cp ../input/* .  \cp ../input/* .
256  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
257  qsub job_orion41  ln -sf ../../../../run_template/* .
258    \rm pickup*
259    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
260    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
261    \cp ../build/mitgcmuv .
262    job_c20_375cpu < /dev/null >&! output.run &
263    
264    
265  ##########################################################################  ##########################################################################
266  ##########################################################################  ##########################################################################
267  # 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc  # 510*510*6*50, 1500-tile, 375-cpu, excludes land
268    # uses s1500t_17x51 configuration
269    # example for running on c17-c20 using arrayd
270    
271    cd MITgcm/verification/global_ocean.cs32x15/code
272    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
273    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
274    \cp SIZE.h_375 SIZE.h
275    \cp packages.conf_hr packages.conf
276    
277    cd ../build
278    \rm *
279    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
280    make depend
281    make -j
282    
283    cd ..
284    mkdir run
285    cd run
286    \rm *
287    \cp ../input/* .
288    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
289    ln -sf ../../../../run_template/* .
290    \rm pickup*
291    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
292    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
293    \cp ../build/mitgcmuv .
294    job_c20_375cpu < /dev/null >&! output.run &
295    
296    
297    ##########################################################################
298    ##########################################################################
299    # 510*510*6*50, 1500-tile, 500-cpu, excludes land
300    # uses s1500t_17x51 configuration
301    # example for running on c17-c20 using arrayd
302    
303    cd MITgcm/verification/global_ocean.cs32x15/code
304    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
305    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
306    \cp SIZE.h_500 SIZE.h
307    \cp packages.conf_hr packages.conf
308    
309    cd ../build
310    \rm *
311    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_ifort+mpi_altix_nas
312    make depend
313    make -j
314    
315    cd ..
316    mkdir run
317    cd run
318    \rm *
319    \cp ../input/* .
320    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
321    ln -sf ../../../../run_template/* .
322    \rm pickup*
323    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
324    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
325    \cp ../build/mitgcmuv .
326    job_c19_500cpu < /dev/null >&! output.run &
327    
328    
329    ##########################################################################
330    ##########################################################################
331    # 510*510*6*50, 216-cpu cube sphere on cosmos
332    
333    cd MITgcm/verification/global_ocean.cs32x15/code
334    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
335    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
336    \cp SIZE.h_216 SIZE.h
337    \cp packages.conf_hr packages.conf
338    
339    module unload latest_intel80
340    module unload mpich-gm-intel80
341    module load latest_intel81
342    module load mpich-gm-intel81
343    
344    cd ../build
345    \rm *
346    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia32_ifort+mpi_cosmos
347    make depend
348    make -j
349    
350    cd ..
351    mkdir run
352    cd run
353    \rm *
354    \cp ../input/* .
355    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
356    ln -sf ../../../../run_template/* .
357    \rm pickup*
358    ln -sf ../../../../run_template/pickup.0000316440.cube19 pickup.0000000216
359    ln -sf  ../../../../run_template/pickup_seaice.0000316440.cube19 pickup_seaice.0000000216
360    \cp ../build/mitgcmuv .
361    bsub < job_cosmos
362    
363    
364    ##########################################################################
365    ##########################################################################
366    # 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc
367  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
368  # presently residing under orion:/tmp1/dmenem/cube  # presently residing under orion:/tmp1/dmenem/cube
369    
370  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
371  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
372  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
373  \cp SIZE.h_50 SIZE.h  \cp SIZE.h_54 SIZE.h
374  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
375    
376  cd ../build  cd ../build
377  \rm *  \rm *
378  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
379  make depend  make depend
380  make  make -j
381    
382  cd ..  cd ..
383  mkdir run  mkdir run
# Line 234  qsub job_orion Line 390  qsub job_orion
390    
391  ##########################################################################  ##########################################################################
392  ##########################################################################  ##########################################################################
393  # 510*510*6*50, 216-cpu cube sphere on altix with efc  # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc
394  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
395  # these can be obained from lou:/u/menemenl/cube  # presently residing under orion:/tmp1/dmenem/cube
396    
397  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
398  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
399  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .
400  \cp SIZE.h_216 SIZE.h  \cp SIZE.h_41 SIZE.h
401  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
402    
403  cd ../build  cd ../build
404  \rm *  \rm *
405  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
406  make depend  make depend
407  make  make -j
408    
409  cd ..  cd ..
410  mkdir run  mkdir run
# Line 256  cd run Line 412  cd run
412  \rm *  \rm *
413  \cp ../input/* .  \cp ../input/* .
414  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
415  qsub job_altix  qsub job_orion41
416    
417    
418  ##########################################################################  ##########################################################################
419  ##########################################################################  ##########################################################################
420  # matlab script for generating pChkptFreq  # 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc
421    # requires input files in sudirectories run_template and ncep_rgau
422    # presently residing under orion:/tmp1/dmenem/cube
423    
424  nTimeSteps=26352;  cd MITgcm/verification/global_ocean.cs32x15/code
425  for niter0=216:26352:(26352*12)  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
426   pChkptFreq=(niter0+nTimeSteps)*1200;  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
427   day=pChkptFreq/24/60/60;  \cp SIZE.h_50 SIZE.h
428   disp(['niter0=' int2str(niter0) ',day=' int2str(day) ', ' ...  \cp packages.conf_hr packages.conf
  datestr(datenum(1992,1,1)+day) ', pChkptFreq=' int2str(pChkptFreq)])  
 end  
429    
430  niter0 = 216   , day = 369 , 04-Jan-1993, pChkptFreq = 31881600  cd ../build
431  niter0 = 26568 , day = 735 , 05-Jan-1994, pChkptFreq = 63504000  \rm *
432  niter0 = 52920 , day = 1101, 06-Jan-1995, pChkptFreq = 95126400  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
433  niter0 = 79272 , day = 1467, 07-Jan-1996, pChkptFreq = 126748800  make depend
434  niter0 = 105624, day = 1833, 07-Jan-1997, pChkptFreq = 158371200  make -j
435  niter0 = 131976, day = 2199, 08-Jan-1998, pChkptFreq = 189993600  
436  niter0 = 158328, day = 2565, 09-Jan-1999, pChkptFreq = 221616000  cd ..
437  niter0 = 184680, day = 2931, 10-Jan-2000, pChkptFreq = 253238400  mkdir run
438  niter0 = 211032, day = 3297, 10-Jan-2001, pChkptFreq = 284860800  cd run
439  niter0 = 237384, day = 3663, 11-Jan-2002, pChkptFreq = 316483200  \rm *
440  niter0 = 263736, day = 4029, 12-Jan-2003, pChkptFreq = 348105600  \cp ../input/* .
441  niter0 = 290088, day = 4395, 13-Jan-2004, pChkptFreq = 379728000  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
442    qsub job_orion
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