/[MITgcm]/MITgcm_contrib/high_res_cube/README_ice
ViewVC logotype

Diff of /MITgcm_contrib/high_res_cube/README_ice

Parent Directory Parent Directory | Revision Log Revision Log | View Revision Graph Revision Graph | View Patch Patch

revision 1.19 by dimitri, Sun Jan 25 01:41:01 2004 UTC revision 1.37 by dimitri, Tue May 11 04:03:55 2004 UTC
# Line 1  Line 1 
1  Instructions for setting up a cube-sphere integration with sea-ice.  Instructions for setting up a cube-sphere integration with sea-ice.
2  Date last tested: January 9, 2004.  Date last tested: March 28, 2004.
3  This is the code used for first multi-year 510x510x6  Code and input used for integrating cube5.
 cube-sphere integration.  
4    
5    
6  ##########################################################################  ##########################################################################
# Line 10  cube-sphere integration. Line 9  cube-sphere integration.
9    
10  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack  setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
11  cvs login ( CVS password: cvsanon )  cvs login ( CVS password: cvsanon )
12  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/README_ice  cvs co -r hrcube5 MITgcm_contrib/high_res_cube/README_ice
13  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/code-mods  cvs co -r hrcube5 MITgcm_contrib/high_res_cube/code-mods
14  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/matlab-grid-converter  cvs co -r hrcube5 MITgcm_contrib/high_res_cube/input
15  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/input  cvs co -r hrcube5 MITgcm_contrib/high_res_cube/results
16  cvs co -r hrcube_1 MITgcm_contrib/high_res_cube/results  cvs co -r hrcube5 MITgcm_code
17  cvs co -r hrcube_1 MITgcm_code  cvs co -r hrcube5 MITgcm/verification/global_ocean.cs32x15
 cvs co -r hrcube_1 MITgcm/verification/global_ocean.cs32x15  
18    
19    
20  ##########################################################################  ##########################################################################
# Line 25  cvs co -r hrcube_1 MITgcm/verification/g Line 23  cvs co -r hrcube_1 MITgcm/verification/g
23    
24  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
25  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
26  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .  \cp ../../../utils/exch2/code-mods/s12t_16x32/* .
27    cd ../build
28  cd ..  \rm *
 mkdir build  
 cd build  
29  ../../../tools/genmake2 -mods=../code  ../../../tools/genmake2 -mods=../code
30  make depend  make depend
31  make  make
32    cd ..
33    mkdir run
34    cd run
35    \rm *
36    \cp ../input/* .
37    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
38    ../build/mitgcmuv >& output.txt
39    
40    comparison output is in:
41    ../../../../MITgcm_contrib/high_res_cube/results/output.txt
42    
43    to use matlab to look at the output
44    matlab
45    
46    for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}
47        tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);
48        cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
49    end
50    
51    heff=permute(readbin(['HEFF.0000000020.data'],[32,6,32]),[1 3 2]);
52    mask=0*heff; mask(find(heff>.001))=1;
53    uice=mask.*permute(readbin(['UICE.0000000020.data'],[32,6,32]),[1 3 2]);
54    vice=mask.*permute(readbin(['VICE.0000000020.data'],[32,6,32]),[1 3 2]);
55    clf
56    subplot(221), mypcolor(uice(:,:,3)'), colorbar, title('uice, tile 3')
57    subplot(222), mypcolor(uice(:,:,6)'), colorbar, title('uice, tile 6')
58    subplot(223), mypcolor(vice(:,:,3)'), colorbar, title('vice, tile 3')
59    subplot(224), mypcolor(vice(:,:,6)'), colorbar, title('vice, tile 6')
60    
61    
62    ##########################################################################
63    ##########################################################################
64    # 32*32*6*15, 17-tile, 1-cpu cube sphere experiment
65    
66    cd MITgcm/verification/global_ocean.cs32x15/code
67    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
68    \cp ../code_alt/code.176t_8x4/* .
69    cd ../build
70    \rm *
71    ../../../tools/genmake2 -mods=../code
72    make depend
73    make
74  cd ..  cd ..
75  mkdir run  mkdir run
76  cd run  cd run
77    \rm *
78  \cp ../input/* .  \cp ../input/* .
 \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .  
79  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
80  ../build/mitgcmuv >& output.txt  ../build/mitgcmuv >& output.txt
81    
# Line 70  subplot(224), mypcolor(vice(:,:,6)'), co Line 107  subplot(224), mypcolor(vice(:,:,6)'), co
107    
108  cd MITgcm/verification/global_ocean.cs32x15/code  cd MITgcm/verification/global_ocean.cs32x15/code
109  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
110  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .  \cp ../../../utils/exch2/code-mods/s12t_16x32/* .
111  \cp SIZE.h_mpi SIZE.h  \cp SIZE.h_mpi SIZE.h
 \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  
112    
113  cd ..  cd ../build
 mkdir build  
 cd build  
114  \rm *  \rm *
115  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
116  make depend  make depend
# Line 87  mkdir run Line 121  mkdir run
121  cd run  cd run
122  \rm *  \rm *
123  \cp ../input/* .  \cp ../input/* .
 \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .  
124  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
125  mpirun -np 2 ../build/mitgcmuv  mpirun -np 2 ../build/mitgcmuv
126    
127    
128  ##########################################################################  ##########################################################################
129  ##########################################################################  ##########################################################################
130  # 510*510*6*50, 54-cpu cube sphere on the altices with efc  # 510*510*6*50, 216-tile, 54-cpu cube sphere on the altices with efc
131  # requires input files in sudirectories run_template and ncep_rgau  # requires input files in sudirectories run_template and ncep_rgau
132  # presently residing under orion:/tmp1/dmenem/cube  # presently residing under orion:/tmp1/dmenem/cube
133    
# Line 102  cd MITgcm/verification/global_ocean.cs32 Line 135  cd MITgcm/verification/global_ocean.cs32
135  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
136  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
137  \cp SIZE.h_54 SIZE.h  \cp SIZE.h_54 SIZE.h
 \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  
138  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
139  \cp mom_vi_hdissip.F_hr mom_vi_hdissip.F  
140    cd ../build
141    \rm *
142    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
143    make depend
144    make
145    
146    cd ..
147    mkdir run
148    cd run
149    \rm *
150    \cp ../input/* .
151    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
152    qsub job_orion
153    
154    
155    ##########################################################################
156    ##########################################################################
157    # 510*510*6*50, 54-tile, 54-cpu cube sphere on the altices with efc
158    # starting with pickup file from end of 1992
159    # requires input files in sudirectories run_template and ncep_rgau
160    # presently residing under orion:/tmp1/dmenem/cube
161    
162    cd MITgcm/verification/global_ocean.cs32x15/code
163    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
164    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s54t_170x170/* .
165    \cp packages.conf_hr packages.conf
166    
167    cd ../build
168    \rm *
169    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
170    make depend
171    make
172    
173  cd ..  cd ..
174  mkdir build  mkdir run
175  cd build  cd run
176    \rm *
177    \cp ../input/* .
178    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
179    qsub job_altix93_newIO
180    
181    
182    ##########################################################################
183    ##########################################################################
184    # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc
185    # requires input files in sudirectories run_template and ncep_rgau
186    # presently residing under orion:/tmp1/dmenem/cube
187    
188    cd MITgcm/verification/global_ocean.cs32x15/code
189    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
190    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .
191    \cp SIZE.h_41 SIZE.h
192    \cp packages.conf_hr packages.conf
193    
194    cd ../build
195    \rm *
196    ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
197    make depend
198    make
199    
200    cd ..
201    mkdir run
202    cd run
203    \rm *
204    \cp ../input/* .
205    \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
206    qsub job_orion41
207    
208    
209    ##########################################################################
210    ##########################################################################
211    # 510*510*6*50, 1500-tile, 50-cpu cube sphere on the altices with efc
212    # requires input files in sudirectories run_template and ncep_rgau
213    # presently residing under orion:/tmp1/dmenem/cube
214    
215    cd MITgcm/verification/global_ocean.cs32x15/code
216    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
217    \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s1500t_17x51/* .
218    \cp SIZE.h_50 SIZE.h
219    \cp packages.conf_hr packages.conf
220    
221    cd ../build
222  \rm *  \rm *
223  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
224  make depend  make depend
# Line 120  cd run Line 230  cd run
230  \rm *  \rm *
231  \cp ../input/* .  \cp ../input/* .
232  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
 \cm data.exf_clim_hr data.exf_clim  
233  qsub job_orion  qsub job_orion
234    
235    
# Line 134  cd MITgcm/verification/global_ocean.cs32 Line 243  cd MITgcm/verification/global_ocean.cs32
243  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
244  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
245  \cp SIZE.h_216 SIZE.h  \cp SIZE.h_216 SIZE.h
 \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h  
246  \cp packages.conf_hr packages.conf  \cp packages.conf_hr packages.conf
 \cp mom_vi_hdissip.F_hr mom_vi_hdissip.F  
247    
248  cd ..  cd ../build
 mkdir build  
 cd build  
249  \rm *  \rm *
250  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix  ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
251  make depend  make depend
# Line 152  cd run Line 257  cd run
257  \rm *  \rm *
258  \cp ../input/* .  \cp ../input/* .
259  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
 \cm data.exf_clim_hr data.exf_clim  
260  qsub job_altix  qsub job_altix
261    
262    
# Line 161  qsub job_altix Line 265  qsub job_altix
265  # matlab script for generating pChkptFreq  # matlab script for generating pChkptFreq
266    
267  nTimeSteps=26352;  nTimeSteps=26352;
268  for niter0=216:26352:(26352*11)  for niter0=216:26352:(26352*12)
269   pChkptFreq=(niter0+nTimeSteps)*1200;   pChkptFreq=(niter0+nTimeSteps)*1200;
270   day=pChkptFreq/24/60/60;   day=pChkptFreq/24/60/60;
271   disp(['niter0=' int2str(niter0) ',day=' int2str(day) ', ' ...   disp(['niter0=' int2str(niter0) ',day=' int2str(day) ', ' ...
# Line 179  niter0 = 184680, day = 2931, 10-Jan-2000 Line 283  niter0 = 184680, day = 2931, 10-Jan-2000
283  niter0 = 211032, day = 3297, 10-Jan-2001, pChkptFreq = 284860800  niter0 = 211032, day = 3297, 10-Jan-2001, pChkptFreq = 284860800
284  niter0 = 237384, day = 3663, 11-Jan-2002, pChkptFreq = 316483200  niter0 = 237384, day = 3663, 11-Jan-2002, pChkptFreq = 316483200
285  niter0 = 263736, day = 4029, 12-Jan-2003, pChkptFreq = 348105600  niter0 = 263736, day = 4029, 12-Jan-2003, pChkptFreq = 348105600
286    niter0 = 290088, day = 4395, 13-Jan-2004, pChkptFreq = 379728000
Legend:
Removed from v.1.19  
changed lines
  Added in v.1.37
  ViewVC Help
Powered by ViewVC 1.1.22