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Revision 1.23 - (hide annotations) (download)
Sat Feb 7 23:18:05 2004 UTC (21 years, 5 months ago) by dimitri
Branch: MAIN
Changes since 1.22: +29 -2 lines
Removed high_res_cube/code-mods/mom_vi_hdissip.F_hr

1 dimitri 1.1 Instructions for setting up a cube-sphere integration with sea-ice.
2 dimitri 1.20 Date last tested: January 24, 2004.
3 dimitri 1.21 This is the code used for cube2, the second 1992-2002 510x510x6
4 dimitri 1.14 cube-sphere integration.
5 dimitri 1.8
6    
7     ##########################################################################
8     ##########################################################################
9 dimitri 1.14 # getting the code from anonymous CVS server
10 dimitri 1.1
11     setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
12     cvs login ( CVS password: cvsanon )
13 dimitri 1.20 cvs co -r hrcube_2 MITgcm_contrib/high_res_cube/README_ice
14     cvs co -r hrcube_2 MITgcm_contrib/high_res_cube/code-mods
15     cvs co -r hrcube_2 MITgcm_contrib/high_res_cube/matlab-grid-converter
16     cvs co -r hrcube_2 MITgcm_contrib/high_res_cube/input
17     cvs co -r hrcube_2 MITgcm_contrib/high_res_cube/results
18     cvs co -r hrcube_2 MITgcm_code
19     cvs co -r hrcube_2 MITgcm/verification/global_ocean.cs32x15
20 dimitri 1.14
21    
22     ##########################################################################
23     ##########################################################################
24     # 32*32*6*15, 1-cpu cube sphere
25 dimitri 1.3
26 dimitri 1.1 cd MITgcm/verification/global_ocean.cs32x15/code
27 dimitri 1.8 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
28     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .
29 dimitri 1.3
30 dimitri 1.2 cd ..
31     mkdir build
32     cd build
33 dimitri 1.10 ../../../tools/genmake2 -mods=../code
34 dimitri 1.1 make depend
35     make
36 dimitri 1.3
37 dimitri 1.1 cd ..
38     mkdir run
39     cd run
40 dimitri 1.8 \cp ../input/* .
41     \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .
42     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
43 dimitri 1.3 ../build/mitgcmuv >& output.txt
44    
45     comparison output is in:
46     ../../../../MITgcm_contrib/high_res_cube/results/output.txt
47    
48     to use matlab to look at the output
49     matlab
50 dimitri 1.17
51 dimitri 1.5 for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}
52 dimitri 1.13 tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);
53 dimitri 1.4 cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
54     end
55 dimitri 1.8
56 dimitri 1.17 heff=permute(readbin(['HEFF.0000000020.data'],[32,6,32]),[1 3 2]);
57     mask=0*heff; mask(find(heff>.001))=1;
58     uice=mask.*permute(readbin(['UICE.0000000020.data'],[32,6,32]),[1 3 2]);
59     vice=mask.*permute(readbin(['VICE.0000000020.data'],[32,6,32]),[1 3 2]);
60     clf
61     subplot(221), mypcolor(uice(:,:,3)'), colorbar, title('uice, tile 3')
62     subplot(222), mypcolor(uice(:,:,6)'), colorbar, title('uice, tile 6')
63     subplot(223), mypcolor(vice(:,:,3)'), colorbar, title('vice, tile 3')
64     subplot(224), mypcolor(vice(:,:,6)'), colorbar, title('vice, tile 6')
65    
66 dimitri 1.8
67     ##########################################################################
68     ##########################################################################
69     # 32*32*6*15, 2-cpu cube sphere on the altices with efc
70    
71     cd MITgcm/verification/global_ocean.cs32x15/code
72     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
73     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .
74     \cp SIZE.h_mpi SIZE.h
75    
76     cd ..
77     mkdir build
78     cd build
79 dimitri 1.14 \rm *
80 dimitri 1.10 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
81 dimitri 1.8 make depend
82     make
83    
84     cd ..
85     mkdir run
86     cd run
87 dimitri 1.14 \rm *
88 dimitri 1.8 \cp ../input/* .
89     \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .
90     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
91     mpirun -np 2 ../build/mitgcmuv
92    
93    
94     ##########################################################################
95     ##########################################################################
96 dimitri 1.9 # 510*510*6*50, 54-cpu cube sphere on the altices with efc
97 dimitri 1.14 # requires input files in sudirectories run_template and ncep_rgau
98     # presently residing under orion:/tmp1/dmenem/cube
99 dimitri 1.8
100     cd MITgcm/verification/global_ocean.cs32x15/code
101     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
102     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
103     \cp SIZE.h_54 SIZE.h
104 dimitri 1.11 \cp packages.conf_hr packages.conf
105 dimitri 1.23
106     cd ..
107     mkdir build
108     cd build
109     \rm *
110     ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
111     make depend
112     make
113    
114     cd ..
115     mkdir run
116     cd run
117     \rm *
118     \cp ../input/* .
119     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
120     qsub job_orion
121    
122    
123     ##########################################################################
124     ##########################################################################
125     # 510*510*6*50, 205-tile, 41-cpu cube sphere on the altices with efc
126     # requires input files in sudirectories run_template and ncep_rgau
127     # presently residing under orion:/tmp1/dmenem/cube
128    
129     cd MITgcm/verification/global_ocean.cs32x15/code
130     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
131     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s205t_85x85/* .
132     \cp SIZE.h_41 SIZE.h
133     \cp packages.conf_hr packages.conf
134 dimitri 1.8
135     cd ..
136     mkdir build
137     cd build
138 dimitri 1.14 \rm *
139 dimitri 1.10 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
140 dimitri 1.8 make depend
141     make
142    
143     cd ..
144     mkdir run
145     cd run
146 dimitri 1.14 \rm *
147 dimitri 1.8 \cp ../input/* .
148     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
149 dimitri 1.9 qsub job_orion
150    
151    
152     ##########################################################################
153     ##########################################################################
154 dimitri 1.13 # 510*510*6*50, 216-cpu cube sphere on altix with efc
155 dimitri 1.17 # requires input files in sudirectories run_template and ncep_rgau
156     # these can be obained from lou:/u/menemenl/cube
157 dimitri 1.9
158     cd MITgcm/verification/global_ocean.cs32x15/code
159     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
160     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
161     \cp SIZE.h_216 SIZE.h
162 dimitri 1.12 \cp packages.conf_hr packages.conf
163 dimitri 1.9
164     cd ..
165     mkdir build
166     cd build
167 dimitri 1.15 \rm *
168 dimitri 1.13 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
169 dimitri 1.9 make depend
170     make
171    
172     cd ..
173     mkdir run
174     cd run
175 dimitri 1.15 \rm *
176     \cp ../input/* .
177     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
178 dimitri 1.12 qsub job_altix
179 dimitri 1.17
180    
181     ##########################################################################
182     ##########################################################################
183     # matlab script for generating pChkptFreq
184    
185     nTimeSteps=26352;
186     for niter0=216:26352:(26352*11)
187     pChkptFreq=(niter0+nTimeSteps)*1200;
188     day=pChkptFreq/24/60/60;
189     disp(['niter0=' int2str(niter0) ',day=' int2str(day) ', ' ...
190     datestr(datenum(1992,1,1)+day) ', pChkptFreq=' int2str(pChkptFreq)])
191     end
192    
193     niter0 = 216 , day = 369 , 04-Jan-1993, pChkptFreq = 31881600
194     niter0 = 26568 , day = 735 , 05-Jan-1994, pChkptFreq = 63504000
195     niter0 = 52920 , day = 1101, 06-Jan-1995, pChkptFreq = 95126400
196     niter0 = 79272 , day = 1467, 07-Jan-1996, pChkptFreq = 126748800
197     niter0 = 105624, day = 1833, 07-Jan-1997, pChkptFreq = 158371200
198     niter0 = 131976, day = 2199, 08-Jan-1998, pChkptFreq = 189993600
199     niter0 = 158328, day = 2565, 09-Jan-1999, pChkptFreq = 221616000
200     niter0 = 184680, day = 2931, 10-Jan-2000, pChkptFreq = 253238400
201     niter0 = 211032, day = 3297, 10-Jan-2001, pChkptFreq = 284860800
202     niter0 = 237384, day = 3663, 11-Jan-2002, pChkptFreq = 316483200
203     niter0 = 263736, day = 4029, 12-Jan-2003, pChkptFreq = 348105600

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