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Revision 1.13 - (hide annotations) (download)
Sat Jan 10 00:50:25 2004 UTC (20 years, 4 months ago) by dimitri
Branch: MAIN
Changes since 1.12: +5 -10 lines 
checking in code for first multi-year 510x510x6 integration
1 dimitri 1.1 Instructions for setting up a cube-sphere integration with sea-ice.
2 dimitri 1.8 Date last tested: December 11, 2003.
3    
4    
5     ##########################################################################
6     ##########################################################################
7     # 32*32*6*15, 1-cpu cube sphere
8 dimitri 1.1
9     setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
10     cvs login ( CVS password: cvsanon )
11 dimitri 1.7 cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice
12     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods
13     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter
14     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input
15     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results
16 dimitri 1.6 cvs co -r checkpoint52d_pre MITgcm_code
17     cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15
18 dimitri 1.3
19 dimitri 1.1 cd MITgcm/verification/global_ocean.cs32x15/code
20 dimitri 1.8 \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
21     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .
22 dimitri 1.12 \rm mdsio_readfield.F
23 dimitri 1.3
24 dimitri 1.2 cd ..
25     mkdir build
26     cd build
27 dimitri 1.10 ../../../tools/genmake2 -mods=../code
28 dimitri 1.1 make depend
29     make
30 dimitri 1.3
31 dimitri 1.1 cd ..
32     mkdir run
33     cd run
34 dimitri 1.8 \cp ../input/* .
35     \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .
36     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
37 dimitri 1.3 ../build/mitgcmuv >& output.txt
38    
39     comparison output is in:
40     ../../../../MITgcm_contrib/high_res_cube/results/output.txt
41    
42     to use matlab to look at the output
43     matlab
44 dimitri 1.5 for fld={'Eta','VICE','UICE','HEFF','AREA','Qsw','Qnet','FV','FU','EmPmR'}
45 dimitri 1.13 tmp=permute(readbin([fld{1} '.0000000020.data'],[32,6,32]),[1 3 2]);
46 dimitri 1.4 cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause
47     end
48 dimitri 1.8
49    
50     ##########################################################################
51     ##########################################################################
52     # 32*32*6*15, 2-cpu cube sphere on the altices with efc
53    
54     setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
55     cvs login ( CVS password: cvsanon )
56     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice
57     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods
58     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter
59     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input
60     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results
61     cvs co -r checkpoint52d_pre MITgcm_code
62     cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15
63    
64     cd MITgcm/verification/global_ocean.cs32x15/code
65     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
66     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s12t_16x32/* .
67     \cp SIZE.h_mpi SIZE.h
68     \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h
69     \rm mdsio_readfield.F
70    
71     cd ..
72     mkdir build
73     cd build
74 dimitri 1.10 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
75 dimitri 1.8 make depend
76     make
77    
78     cd ..
79     mkdir run
80     cd run
81     \cp ../input/* .
82     \cp ../../../../MITgcm_contrib/high_res_cube/matlab-grid-converter/tile00* .
83     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
84     mpirun -np 2 ../build/mitgcmuv
85    
86    
87     ##########################################################################
88     ##########################################################################
89 dimitri 1.9 # 510*510*6*50, 54-cpu cube sphere on the altices with efc
90 dimitri 1.8
91     setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
92     cvs login ( CVS password: cvsanon )
93     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice
94     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods
95     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter
96     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input
97     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results
98     cvs co -r checkpoint52d_pre MITgcm_code
99     cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15
100    
101     cd MITgcm/verification/global_ocean.cs32x15/code
102     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
103     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
104     \cp SIZE.h_54 SIZE.h
105     \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h
106 dimitri 1.11 \cp packages.conf_hr packages.conf
107 dimitri 1.13 \cp mom_vi_hdissip.F_hr mom_vi_hdissip.F
108 dimitri 1.8 \rm mdsio_readfield.F
109    
110     cd ..
111     mkdir build
112     cd build
113 dimitri 1.10 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi
114 dimitri 1.8 make depend
115     make
116    
117     cd ..
118     mkdir run
119     cd run
120     \cp ../input/* .
121     \cp ../../../../MITgcm_contrib/high_res_cube/input/* .
122     \cp data_hr data
123 dimitri 1.12 \cp data.pkg_hr data.pkg
124 dimitri 1.9 \ln -sf ../../../../run_template/tile00* .
125     \ln -sf ../../../../run_template/LEV* .
126     \ln -sf ../../../../run_template/BATHY_18360x85_filled.bin .
127     qsub job_orion
128    
129    
130     ##########################################################################
131     ##########################################################################
132 dimitri 1.13 # 510*510*6*50, 216-cpu cube sphere on altix with efc
133 dimitri 1.9
134     setenv CVSROOT :pserver:cvsanon@mitgcm.org:/u/u0/gcmpack
135     cvs login ( CVS password: cvsanon )
136     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/README_ice
137     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/code-mods
138     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/matlab-grid-converter
139     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/input
140     cvs co -r checkpoint52d_pre MITgcm_contrib/high_res_cube/results
141     cvs co -r checkpoint52d_pre MITgcm_code
142     cvs co -r checkpoint52d_pre MITgcm/verification/global_ocean.cs32x15
143    
144     cd MITgcm/verification/global_ocean.cs32x15/code
145     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/* .
146     \cp ../../../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
147     \cp SIZE.h_216 SIZE.h
148     \cp CPP_EEOPTIONS.h_mpi CPP_EEOPTIONS.h
149 dimitri 1.12 \cp packages.conf_hr packages.conf
150 dimitri 1.13 \cp mom_vi_hdissip.F_hr mom_vi_hdissip.F
151 dimitri 1.9 \rm mdsio_readfield.F
152    
153     cd ..
154     mkdir build
155     cd build
156 dimitri 1.13 ../../../tools/genmake2 -mods=../code -of ../../../tools/build_options/linux_ia64_efc+mpi_altix
157 dimitri 1.9 make depend
158     make
159    
160     cd ..
161     mkdir run
162     cd run
163 dimitri 1.12 qsub job_altix
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