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Instructions for setting up a cube-sphere integration with sea-ice. |
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|
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Forcing fields and other input files needed for the CS510 |
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configuration can be obtained from |
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http://ecco2.org/products/model_setups/cs510.html |
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|
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================= |
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|
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UPDATES |
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|
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June 13, 2008. Cube 81 - same as cube79 but with |
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1. salt plume package turned on |
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2. new values for data.seaice and data.exf |
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3. DIFFKR_2_20_1_lat6070_cube81, which has diffKrS/T=3.55e-7 in Arctic |
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4. GMRedi turned off |
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|
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December 22, 2007. Cube80 - same as cube79 but with |
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SEAICE_BREAKS_VERIFICATION (SST relaxation depends on SIarea) |
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ALLOW_CLIMSST_RELAXATION to Reynold's daily 1/4-deg AVHRR analysis |
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ALLOW_CLIMSST_RELAXATION to monthly 1-deg WOA05 analysis |
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December 2, 2007. Cube79 - same as cube78 (blend3) but with |
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useRelativeWind=.TRUE. and SEAICE_gamma_t=259200 |
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November 22, 2007. Cube 78 - blend 3 |
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November 6, 2007. Cube 77 - same as cube75 but with SEAICE_SALINITY |
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and era40_ecmwf_blend/cube59_GPCP forcing |
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November 3, 2007. Cube 76 - same as cube77 but 1979-2006 integration |
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August 31, 2007. Cube75 - the second blend. |
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August 9, 2007. Cube74 |
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August 6, 2007. Cube73 |
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July 24, 2007. Cube72 |
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July 8, 2007. Cube66: SEAICE_MULTICATEGORY, SEAICE_VARIABLE_FREEZING_POINT, |
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rhonil=1027.5, [temp/salt]AdvScheme=7, convertFW2Salt=-1, LSR_ERROR=1e-6 |
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useRealFreshWaterFlux=.TRUE., runoff_lat_inc=179*1, SEAICE_salinity=10 |
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bathyFile=GEBCO_510x6x510_ver06_dig.bin, HeffFile=heff_file8 |
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SEAICE_availHeatFrac=.5, useGMRedi=.TRUE. |
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April 24, 2007. Cube65: Bryan and Lewis 1979 diffusivity |
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(cube67, cube68, and cube69 were carried out with cube65 code) |
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April 7 , 2007. Cube64: era40_fullres forcing |
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|
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|
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########################################################################## |
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# Get forcing files, etc. |
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# Example below is for cube81 on /nobackup2a/menemenl |
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|
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cd /nobackup2a/menemenl |
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mkdir cube81 |
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cd cube81 |
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ln -sf ../run_template . |
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ln -sf ../cube78_forcing . |
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ln -sf ../ncep_rgau/ . |
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|
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|
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########################################################################## |
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# getting the code from anonymous CVS server |
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|
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bash or sh shell: |
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$ export CVSROOT=':pserver:cvsanon@mitgcm.org:/u/gcmpack' |
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$ cvs login |
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( enter the CVS password: "cvsanon" ) |
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|
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tcsh or csh shell: |
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$ setenv CVSROOT ':pserver:cvsanon@mitgcm.org:/u/gcmpack' |
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$ cvs login |
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( enter the CVS password: "cvsanon" ) |
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|
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cvs co MITgcm_contrib/high_res_cube/README.cs510 |
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cvs co MITgcm_contrib/high_res_cube/code-mods |
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cvs co MITgcm_contrib/high_res_cube/input |
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cvs co MITgcm_code |
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|
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|
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########################################################################## |
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# 510*510*6*50, 216-cpu cube sphere on altix with ifort |
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|
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cd MITgcm |
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mkdir build run |
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cd build |
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\rm * |
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\cp ../../MITgcm_contrib/high_res_cube/code-mods/* . |
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\cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* . |
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\cp SIZE.h_216 SIZE.h |
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../tools/genmake2 -of ../../MITgcm_contrib/high_res_cube/code-mods/linux_ia64_ifort+mpi_altix_nas |
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make depend |
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make -j |
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cd ../run |
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\rm * |
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\cp ../../MITgcm_contrib/high_res_cube/input/* . |
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ln -sf ../../run_template/* . |
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\rm pickup* *192_94* *.m D*1 E* G*all.bin L* W*10.bin h*[6-7] PHC* |
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\mv data.exf_hr data.exf |
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\mv data_hr data |
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ln -sf ../../run_template/pickup.0000000216.cube78 pickup.0000000216 |
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ln -sf ../../run_template/pickup_seaice.0000000216.cube78 pickup_seaice.0000000216 |
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ln -sf ../../run_template/pickup.0000000216.meta.cube78 pickup.0000000216.meta |
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ln -sf ../../run_template/pickup_seaice.0000000216.meta.cube78 pickup_seaice.0000000216.meta |
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\cp ../build/mitgcmuv . |
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\mv job_altix cube81 |
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qsub cube81 |
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|
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|
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########################################################################## |
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# generating initial pickup files for cube78 |
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|
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data |
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# run for 4 days from time step 216 with 2-min time step |
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endtime=345600., |
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deltaT=120., |
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pChkptFreq=345600., |
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monitorFreq=1., |
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|
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cd ../../run_template |
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mv pickup.0000000216.cube78 pickup.0000000216.cube78_raw |
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mv pickup_seaice.0000000216.cube78 pickup_seaice.0000000216.cube78_raw |
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cd ../cube78/MITgcm/run |
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\mv pickup.0000002880.data ../../run_template/pickup.0000000216.cube78 |
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\mv pickup_seaice.0000002880.data ../../run_template/pickup_seaice.0000000216.cube78 |
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\mv pickup.0000002880.meta ../../run_template/pickup.0000000216.meta.cube78 |
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\mv pickup_seaice.0000002880.meta ../../run_template/pickup_seaice.0000000216.meta.cube78 |
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\rm *.meta *.data STD* cube78.o* |
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\cp ../../MITgcm_contrib/high_res_cube/input/data_hr data |
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ln -sf ../../run_template/pickup.0000000216.cube78 pickup.0000000216 |
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ln -sf ../../run_template/pickup_seaice.0000000216.cube78 pickup_seaice.0000000216 |
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ln -sf ../../run_template/pickup.0000000216.meta.cube78 pickup.0000000216.meta |
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ln -sf ../../run_template/pickup_seaice.0000000216.meta.cube78 pickup_seaice.0000000216.meta |
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qsub cube78 |
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