/[MITgcm]/MITgcm_contrib/high_res_cube/README.cs510
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revision 1.20 by dimitri, Mon Aug 6 23:53:09 2007 UTC revision 1.44 by dimitri, Fri Jun 19 16:53:09 2009 UTC
# Line 1  Line 1 
1  Instructions for setting up a cube-sphere integration with sea-ice.  Instructions for setting up a cube-sphere integration with sea-ice.
2    
 Forcing fields and other input files needed for the CS510  
 configuration can be obtained from  
 http://ecco2.org/products/model_setups/cs510.html  
   
3  =================  =================
4    
5  UPDATES  UPDATES
6    
7    June 16, 2009. Cube85 -same as cube84 but with:
8       1. split north/south data.seaice parameters from regional optimizations
9       2. includes pkg/salt_plume in the Arctic and pkg/down_slope globally
10       3. initialize from T/S/U/V/ETAN and sea ice files
11       4. 3-day 3D diagnostics
12       5. SEAICE_no_slip=.TRUE. to keep code stable
13    
14    June 13, 2008. Cube 81 - same as cube79 but with
15       1. new values for data.seaice and data.exf
16       2. DIFFKR_2_20_1_lat6070_cube81, which has diffKrS/T=3.55e-7 in Arctic
17       3. GMRedi turned off
18    
19    December 22, 2007. Cube80 - same as cube79 but with
20       SEAICE_BREAKS_VERIFICATION (SST relaxation depends on SIarea)
21       ALLOW_CLIMSST_RELAXATION to Reynold's daily 1/4-deg AVHRR analysis
22       ALLOW_CLIMSST_RELAXATION to monthly 1-deg WOA05 analysis
23    December 2, 2007. Cube79 - same as cube78 (blend3) but with
24       useRelativeWind=.TRUE. and SEAICE_gamma_t=259200
25    November 22, 2007. Cube 78 - blend 3
26    November 6, 2007. Cube 77 - same as cube75 but with SEAICE_SALINITY
27                                and era40_ecmwf_blend/cube59_GPCP forcing
28    November 3, 2007. Cube 76 - same as cube77 but 1979-2006 integration
29    August 31, 2007.  Cube75 - the second blend.
30    August 9, 2007. Cube74
31  August 6, 2007. Cube73  August 6, 2007. Cube73
32  July 24, 2007. Cube72  July 24, 2007. Cube72
33  July 8, 2007. Cube66: SEAICE_MULTICATEGORY, SEAICE_VARIABLE_FREEZING_POINT,  July 8, 2007. Cube66: SEAICE_MULTICATEGORY, SEAICE_VARIABLE_FREEZING_POINT,
# Line 22  April 7 , 2007. Cube64: era40_fullres fo Line 42  April 7 , 2007. Cube64: era40_fullres fo
42    
43  ##########################################################################  ##########################################################################
44  # Get forcing files, etc.  # Get forcing files, etc.
45  # Example below is for cube65 on /nobackup2a/menemenl  # Example below is for cube85 on /nobackup2a/menemenl
46    
47  cd /nobackup2a/menemenl  cd /nobackup2a/menemenl/cs510
48  mkdir cube73  mkdir cube85
49  cd cube73  cd cube85
50  ln -sf ../run_template .  ln -sf ../run_template .
51  ln -sf ../ncep_rgau .  ln -sf ../../forcing/cube78_forcing .
 ln -sf ../era40_ecmwf_blend .  
 ln -sf ../cube59_GPCP .  
52    
53    
54  ##########################################################################  ##########################################################################
55  # getting the code from anonymous CVS server  # getting the code from anonymous CVS server
56    
   bash or sh shell:  
     $ export CVSROOT=':pserver:cvsanon@mitgcm.org:/u/gcmpack'  
     $ cvs login  
       ( enter the CVS password: "cvsanon" )  
   
   tcsh or csh shell:  
     $ setenv CVSROOT ':pserver:cvsanon@mitgcm.org:/u/gcmpack'  
     $ cvs login  
       ( enter the CVS password: "cvsanon" )  
   
57  cvs co MITgcm_contrib/high_res_cube/README.cs510  cvs co MITgcm_contrib/high_res_cube/README.cs510
58  cvs co MITgcm_contrib/high_res_cube/code-mods  cvs co MITgcm_contrib/high_res_cube/code-mods
59  cvs co MITgcm_contrib/high_res_cube/input  cvs co MITgcm_contrib/high_res_cube/input
# Line 60  mkdir build run Line 68  mkdir build run
68  cd build  cd build
69  \rm *  \rm *
70  \cp ../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../MITgcm_contrib/high_res_cube/code-mods/* .
71  \cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/SIZE.h_216 SIZE.h
72  \cp SIZE.h_216 SIZE.h  ../tools/genmake2 -of linux_ia64_ifort+mpi_altix_nas
 ../tools/genmake2 -of ../../MITgcm_contrib/high_res_cube/code-mods/linux_ia64_ifort+mpi_altix_nas  
73  make depend  make depend
74  make -j  make -j 8
75  cd ../run  cd ../run
76  \rm *  \rm *
77  \cp ../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../MITgcm_contrib/high_res_cube/input/* .
78  ln -sf ../../run_template/* .  \ln -sf ../../run_template/* .
79  \rm pickup* *192_94* *.m D*1 E* G*all.bin L* W* h*[6-7] PHCT*  \rm *192_94* *.m heff_* pickup* A* D* E* G*all.bin L* P* W*
80    \mv data.seaice_hr data.seaice
81  \mv data.exf_hr data.exf  \mv data.exf_hr data.exf
82  \mv data_hr data  \mv data_hr data
 ln -sf ../../run_template/pickup.0000000216.cube71 pickup.0000000216  
 ln -sf ../../run_template/pickup_seaice.0000000216.cube66 pickup_seaice.0000000216  
83  \cp ../build/mitgcmuv .  \cp ../build/mitgcmuv .
84  \mv job_altix cube73  \mv job_altix cube85
85  qsub cube73  qsub cube85
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