/[MITgcm]/MITgcm_contrib/high_res_cube/README.cs510
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revision 1.20 by dimitri, Mon Aug 6 23:53:09 2007 UTC revision 1.42 by dimitri, Tue Jun 16 20:57:45 2009 UTC
# Line 1  Line 1 
1  Instructions for setting up a cube-sphere integration with sea-ice.  Instructions for setting up a cube-sphere integration with sea-ice.
2    
 Forcing fields and other input files needed for the CS510  
 configuration can be obtained from  
 http://ecco2.org/products/model_setups/cs510.html  
   
3  =================  =================
4    
5  UPDATES  UPDATES
6    
7    June 16, 2009. Cube85 -same as cube84 but with:
8       1. split north/south data.seaice parameters from regional optimizations
9       2. includes pkg/salt_plume in the Arctic and pkg/down_slope globally
10       3. initialize from T/S/U/V/ETAN and sea ice files
11       4. 3-day 3D diagnostics
12    
13    June 13, 2008. Cube 81 - same as cube79 but with
14       1. new values for data.seaice and data.exf
15       2. DIFFKR_2_20_1_lat6070_cube81, which has diffKrS/T=3.55e-7 in Arctic
16       3. GMRedi turned off
17    
18    December 22, 2007. Cube80 - same as cube79 but with
19       SEAICE_BREAKS_VERIFICATION (SST relaxation depends on SIarea)
20       ALLOW_CLIMSST_RELAXATION to Reynold's daily 1/4-deg AVHRR analysis
21       ALLOW_CLIMSST_RELAXATION to monthly 1-deg WOA05 analysis
22    December 2, 2007. Cube79 - same as cube78 (blend3) but with
23       useRelativeWind=.TRUE. and SEAICE_gamma_t=259200
24    November 22, 2007. Cube 78 - blend 3
25    November 6, 2007. Cube 77 - same as cube75 but with SEAICE_SALINITY
26                                and era40_ecmwf_blend/cube59_GPCP forcing
27    November 3, 2007. Cube 76 - same as cube77 but 1979-2006 integration
28    August 31, 2007.  Cube75 - the second blend.
29    August 9, 2007. Cube74
30  August 6, 2007. Cube73  August 6, 2007. Cube73
31  July 24, 2007. Cube72  July 24, 2007. Cube72
32  July 8, 2007. Cube66: SEAICE_MULTICATEGORY, SEAICE_VARIABLE_FREEZING_POINT,  July 8, 2007. Cube66: SEAICE_MULTICATEGORY, SEAICE_VARIABLE_FREEZING_POINT,
# Line 22  April 7 , 2007. Cube64: era40_fullres fo Line 41  April 7 , 2007. Cube64: era40_fullres fo
41    
42  ##########################################################################  ##########################################################################
43  # Get forcing files, etc.  # Get forcing files, etc.
44  # Example below is for cube65 on /nobackup2a/menemenl  # Example below is for cube85 on /nobackup2a/menemenl
45    
46  cd /nobackup2a/menemenl  cd /nobackup2a/menemenl
47  mkdir cube73  mkdir cube84
48  cd cube73  cd cube84
49  ln -sf ../run_template .  ln -sf ../run_template .
50  ln -sf ../ncep_rgau .  ln -sf ../cube78_forcing .
 ln -sf ../era40_ecmwf_blend .  
 ln -sf ../cube59_GPCP .  
51    
52    
53  ##########################################################################  ##########################################################################
54  # getting the code from anonymous CVS server  # getting the code from anonymous CVS server
55    
   bash or sh shell:  
     $ export CVSROOT=':pserver:cvsanon@mitgcm.org:/u/gcmpack'  
     $ cvs login  
       ( enter the CVS password: "cvsanon" )  
   
   tcsh or csh shell:  
     $ setenv CVSROOT ':pserver:cvsanon@mitgcm.org:/u/gcmpack'  
     $ cvs login  
       ( enter the CVS password: "cvsanon" )  
   
56  cvs co MITgcm_contrib/high_res_cube/README.cs510  cvs co MITgcm_contrib/high_res_cube/README.cs510
57  cvs co MITgcm_contrib/high_res_cube/code-mods  cvs co MITgcm_contrib/high_res_cube/code-mods
58  cvs co MITgcm_contrib/high_res_cube/input  cvs co MITgcm_contrib/high_res_cube/input
# Line 53  cvs co MITgcm_code Line 60  cvs co MITgcm_code
60    
61    
62  ##########################################################################  ##########################################################################
63  # 510*510*6*50, 216-cpu cube sphere on altix with ifort  # 510*510*6*50, 450-cpu cube sphere on altix with ifort
64    
65  cd MITgcm  cd MITgcm
66  mkdir build run  mkdir build run
67  cd build  cd build
68  \rm *  \rm *
69  \cp ../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../MITgcm_contrib/high_res_cube/code-mods/* .
70  \cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/SIZE.h_216 SIZE.h
71  \cp SIZE.h_216 SIZE.h  ../tools/genmake2 -of linux_ia64_ifort+mpi_altix_nas
 ../tools/genmake2 -of ../../MITgcm_contrib/high_res_cube/code-mods/linux_ia64_ifort+mpi_altix_nas  
72  make depend  make depend
73  make -j  make -j 8
74  cd ../run  cd ../run
75  \rm *  \rm *
76  \cp ../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../MITgcm_contrib/high_res_cube/input/* .
77  ln -sf ../../run_template/* .  ln -sf ../../run_template/* .
78  \rm pickup* *192_94* *.m D*1 E* G*all.bin L* W* h*[6-7] PHCT*  \rm pickup* *192_94* *.m D*1 E* G*all.bin L* W*10.bin h*[6-7] PHC*
79    \mv data.seaice_hr data.seaice
80  \mv data.exf_hr data.exf  \mv data.exf_hr data.exf
81  \mv data_hr data  \mv data_hr data
 ln -sf ../../run_template/pickup.0000000216.cube71 pickup.0000000216  
 ln -sf ../../run_template/pickup_seaice.0000000216.cube66 pickup_seaice.0000000216  
82  \cp ../build/mitgcmuv .  \cp ../build/mitgcmuv .
83  \mv job_altix cube73  \mv job_altix cube85
84  qsub cube73  qsub cube85
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