/[MITgcm]/MITgcm_contrib/high_res_cube/README.cs510

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-revision 1.35 by dimitri,
Mon Dec  3 07:58:17 2007 UTC
+revision 1.47 by dimitri,
Wed Jul  1 19:28:36 2009 UTC
 Line 1
  Instructions for setting up a cube-sphere integration with sea-ice.
- Forcing fields and other input files needed for the CS510
- configuration can be obtained from
- http://ecco2.org/products/model_setups/cs510.html
  =================
  UPDATES
- December 2, 2007. Cube79 - same as cube78 (blend3) but with:
+ June 30, 2009.  Cube86 -same as cube85 but with:
-                            i) EXF_SUBTRACT_UVVEL_FROM_UVWIND
+. updated Southern OCean Bathymetry
-                            ii) global-mean rain adjustment
+. ice shelf cavities
-                            iii) _eta_mean = 0 initial conditions
+ June 16, 2009. Cube85 -same as cube84 but with:
+. split north/south data.seaice parameters from regional optimizations
+. includes pkg/salt_plume in the Arctic and pkg/down_slope globally
+. initialize from T/S/U/V/ETAN and sea ice files
+. 3-day 3D diagnostics
+. SEAICE_no_slip=.TRUE. to keep code stable
+ June 13, 2008. Cube 81 - same as cube79 but with
+. new values for data.seaice and data.exf
+. DIFFKR_2_20_1_lat6070_cube81, which has diffKrS/T=3.55e-7 in Arctic
+. GMRedi turned off
+ December 22, 2007. Cube80 - same as cube79 but with
+    SEAICE_BREAKS_VERIFICATION (SST relaxation depends on SIarea)
+    ALLOW_CLIMSST_RELAXATION to Reynold's daily 1/4-deg AVHRR analysis
+    ALLOW_CLIMSST_RELAXATION to monthly 1-deg WOA05 analysis
+ December 2, 2007. Cube79 - same as cube78 (blend3) but with
+    useRelativeWind=.TRUE. and SEAICE_gamma_t=259200
  November 22, 2007. Cube 78 - blend 3
  November 6, 2007. Cube 77 - same as cube75 but with SEAICE_SALINITY
                              and era40_ecmwf_blend/cube59_GPCP forcing
-Line 32 
 April 7 , 2007. Cube64: era40_fullres fo
+Line 46 
 April 7 , 2007. Cube64: era40_fullres fo
  ##########################################################################
  # Get forcing files, etc.
- # Example below is for cube78 on /nobackup2a/menemenl
+ # Example below is for cube86 on /nobackup2a/menemenl
- cd /nobackup2a/menemenl
+ cd /nobackup2a/menemenl/cs510
- mkdir cube78
+ mkdir cube86
- cd cube78
+ cd cube86
  ln -sf ../run_template .
- ln -sf ../cube78_forcing .
+ ln -sf ../../forcing/cube78_forcing .
- ln -sf ../ncep_rgau/ .
  ##########################################################################
  # getting the code from anonymous CVS server
-   bash or sh shell:
-     $ export CVSROOT=':pserver:cvsanon@mitgcm.org:/u/gcmpack'
-     $ cvs login
-       ( enter the CVS password: "cvsanon" )
-   tcsh or csh shell:
-     $ setenv CVSROOT ':pserver:cvsanon@mitgcm.org:/u/gcmpack'
-     $ cvs login
-       ( enter the CVS password: "cvsanon" )
  cvs co MITgcm_contrib/high_res_cube/README.cs510
  cvs co MITgcm_contrib/high_res_cube/code-mods
  cvs co MITgcm_contrib/high_res_cube/input
-Line 69 
 mkdir build run
+Line 72 
 mkdir build run
  cd build
  \rm *
  \cp ../../MITgcm_contrib/high_res_cube/code-mods/* .
- \cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
+ \cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/SIZE.h_216 SIZE.h
- \cp SIZE.h_216 SIZE.h
+ ../tools/genmake2 -of linux_ia64_ifort+mpi_altix_nas
- ../tools/genmake2 -of ../../MITgcm_contrib/high_res_cube/code-mods/linux_ia64_ifort+mpi_altix_nas
  make depend
- make -j
+ make -j 8
  cd ../run
  \rm *
  \cp ../../MITgcm_contrib/high_res_cube/input/* .
- ln -sf ../../run_template/* .
+ \ln -sf ../../run_template/* .
- \rm pickup* *192_94* *.m D*1 E* G*all.bin L* W*10.bin h*[6-7] PHC*
+ \rm *192_94* *.m heff_* pickup* A* D* E*
+ \rm G*all.bin G*dig.bin L* PHC* W*
+ \rm saltInit.cube78 thetaInit.cube78
+ \mv data.seaice_hr data.seaice
  \mv data.exf_hr data.exf
  \mv data_hr data
- ln -sf ../../run_template/pickup.0000000216.cube78 pickup.0000000216
- ln -sf ../../run_template/pickup_seaice.0000000216.cube78 pickup_seaice.0000000216
- ln -sf ../../run_template/pickup.0000000216.meta.cube78 pickup.0000000216.meta
- ln -sf ../../run_template/pickup_seaice.0000000216.meta.cube78 pickup_seaice.0000000216.meta
  \cp ../build/mitgcmuv .
- \mv job_altix cube78
+ \mv job_altix cube86
- qsub cube78
+ qsub cube86
- ##########################################################################
- # generating initial pickup files for cube78
- data
- # run for 4 days from time step 216 with 2-min time step
-  endtime=345600.,
-  deltaT=120.,
-  pChkptFreq=345600.,
-  monitorFreq=1.,
- cd ../../run_template
- mv pickup.0000000216.cube78 pickup.0000000216.cube78_raw
- mv pickup_seaice.0000000216.cube78 pickup_seaice.0000000216.cube78_raw
- cd ../cube78/MITgcm/run
- \mv pickup.0000002880.data ../../run_template/pickup.0000000216.cube78
- \mv pickup_seaice.0000002880.data ../../run_template/pickup_seaice.0000000216.cube78
- \mv pickup.0000002880.meta ../../run_template/pickup.0000000216.meta.cube78
- \mv pickup_seaice.0000002880.meta ../../run_template/pickup_seaice.0000000216.meta.cube78
- \rm *.meta *.data STD* cube78.o*
- \cp ../../MITgcm_contrib/high_res_cube/input/data_hr data
- ln -sf ../../run_template/pickup.0000000216.cube78 pickup.0000000216
- ln -sf ../../run_template/pickup_seaice.0000000216.cube78 pickup_seaice.0000000216
- ln -sf ../../run_template/pickup.0000000216.meta.cube78 pickup.0000000216.meta
- ln -sf ../../run_template/pickup_seaice.0000000216.meta.cube78 pickup_seaice.0000000216.meta
- qsub cube78

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