| 1 | Instructions for setting up a cube-sphere integration with sea-ice. | 
| 2 |  | 
| 3 | ================= | 
| 4 |  | 
| 5 | UPDATES | 
| 6 |  | 
| 7 | June 16, 2009. Cube85 -same as cube84 but with: | 
| 8 | 1. split north/south data.seaice parameters from regional optimizations | 
| 9 | 2. includes pkg/salt_plume in the Arctic and pkg/down_slope globally | 
| 10 | 3. initialize from T/S/U/V/ETAN and sea ice files | 
| 11 | 4. 3-day 3D diagnostics | 
| 12 | 5. SEAICE_no_slip=.TRUE. to keep code stable | 
| 13 |  | 
| 14 | June 13, 2008. Cube 81 - same as cube79 but with | 
| 15 | 1. new values for data.seaice and data.exf | 
| 16 | 2. DIFFKR_2_20_1_lat6070_cube81, which has diffKrS/T=3.55e-7 in Arctic | 
| 17 | 3. GMRedi turned off | 
| 18 |  | 
| 19 | December 22, 2007. Cube80 - same as cube79 but with | 
| 20 | SEAICE_BREAKS_VERIFICATION (SST relaxation depends on SIarea) | 
| 21 | ALLOW_CLIMSST_RELAXATION to Reynold's daily 1/4-deg AVHRR analysis | 
| 22 | ALLOW_CLIMSST_RELAXATION to monthly 1-deg WOA05 analysis | 
| 23 | December 2, 2007. Cube79 - same as cube78 (blend3) but with | 
| 24 | useRelativeWind=.TRUE. and SEAICE_gamma_t=259200 | 
| 25 | November 22, 2007. Cube 78 - blend 3 | 
| 26 | November 6, 2007. Cube 77 - same as cube75 but with SEAICE_SALINITY | 
| 27 | and era40_ecmwf_blend/cube59_GPCP forcing | 
| 28 | November 3, 2007. Cube 76 - same as cube77 but 1979-2006 integration | 
| 29 | August 31, 2007.  Cube75 - the second blend. | 
| 30 | August 9, 2007. Cube74 | 
| 31 | August 6, 2007. Cube73 | 
| 32 | July 24, 2007. Cube72 | 
| 33 | July 8, 2007. Cube66: SEAICE_MULTICATEGORY, SEAICE_VARIABLE_FREEZING_POINT, | 
| 34 | rhonil=1027.5, [temp/salt]AdvScheme=7, convertFW2Salt=-1, LSR_ERROR=1e-6 | 
| 35 | useRealFreshWaterFlux=.TRUE., runoff_lat_inc=179*1, SEAICE_salinity=10 | 
| 36 | bathyFile=GEBCO_510x6x510_ver06_dig.bin, HeffFile=heff_file8 | 
| 37 | SEAICE_availHeatFrac=.5, useGMRedi=.TRUE. | 
| 38 | April 24, 2007. Cube65: Bryan and Lewis 1979 diffusivity | 
| 39 | (cube67, cube68, and cube69 were carried out with cube65 code) | 
| 40 | April 7 , 2007. Cube64: era40_fullres forcing | 
| 41 |  | 
| 42 |  | 
| 43 | ########################################################################## | 
| 44 | # Get forcing files, etc. | 
| 45 | # Example below is for cube85 on /nobackup2a/menemenl | 
| 46 |  | 
| 47 | cd /nobackup2a/menemenl/cs510 | 
| 48 | mkdir cube85 | 
| 49 | cd cube85 | 
| 50 | ln -sf ../run_template . | 
| 51 | ln -sf ../../forcing/cube78_forcing . | 
| 52 |  | 
| 53 |  | 
| 54 | ########################################################################## | 
| 55 | # getting the code from anonymous CVS server | 
| 56 |  | 
| 57 | cvs co MITgcm_contrib/high_res_cube/README.cs510 | 
| 58 | cvs co MITgcm_contrib/high_res_cube/code-mods | 
| 59 | cvs co MITgcm_contrib/high_res_cube/input | 
| 60 | cvs co MITgcm_code | 
| 61 |  | 
| 62 |  | 
| 63 | ########################################################################## | 
| 64 | # 510*510*6*50, 216-cpu cube sphere on altix with ifort | 
| 65 |  | 
| 66 | cd MITgcm | 
| 67 | mkdir build run | 
| 68 | cd build | 
| 69 | \rm * | 
| 70 | \cp ../../MITgcm_contrib/high_res_cube/code-mods/* . | 
| 71 | \cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/SIZE.h_216 SIZE.h | 
| 72 | ../tools/genmake2 -of linux_ia64_ifort+mpi_altix_nas | 
| 73 | make depend | 
| 74 | make -j 8 | 
| 75 | cd ../run | 
| 76 | \rm * | 
| 77 | \cp ../../MITgcm_contrib/high_res_cube/input/* . | 
| 78 | \ln -sf ../../run_template/* . | 
| 79 | \rm *192_94* *.m heff_* pickup* A* D* E* G*all.bin L* P* W* | 
| 80 | \mv data.seaice_hr data.seaice | 
| 81 | \mv data.exf_hr data.exf | 
| 82 | \mv data_hr data | 
| 83 | \cp ../build/mitgcmuv . | 
| 84 | \mv job_altix cube85 | 
| 85 | qsub cube85 |