/[MITgcm]/MITgcm_contrib/high_res_cube/README.cs510
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revision 1.2 by dimitri, Sat Apr 7 23:57:59 2007 UTC revision 1.33 by dimitri, Tue Nov 27 20:57:26 2007 UTC
# Line 8  http://ecco2.org/products/model_setups/c Line 8  http://ecco2.org/products/model_setups/c
8    
9  UPDATES  UPDATES
10    
11  April 7, 2007: preparing for cube64  November 22, 2007. Cube 78 - blend 3 test
12    November 6, 2007. Cube 77 - same as cube75 but with SEAICE_SALINITY
13                                and era40_ecmwf_blend/cube59_GPCP forcing
14    November 3, 2007. Cube 76 - same as cube77 but 1979-2006 integration
15    August 31, 2007.  Cube75 - the second blend.
16    August 9, 2007. Cube74
17    August 6, 2007. Cube73
18    July 24, 2007. Cube72
19    July 8, 2007. Cube66: SEAICE_MULTICATEGORY, SEAICE_VARIABLE_FREEZING_POINT,
20       rhonil=1027.5, [temp/salt]AdvScheme=7, convertFW2Salt=-1, LSR_ERROR=1e-6
21       useRealFreshWaterFlux=.TRUE., runoff_lat_inc=179*1, SEAICE_salinity=10
22       bathyFile=GEBCO_510x6x510_ver06_dig.bin, HeffFile=heff_file8
23       SEAICE_availHeatFrac=.5, useGMRedi=.TRUE.
24    April 24, 2007. Cube65: Bryan and Lewis 1979 diffusivity
25       (cube67, cube68, and cube69 were carried out with cube65 code)
26    April 7 , 2007. Cube64: era40_fullres forcing
27    
28    
29  ##########################################################################  ##########################################################################
30  # Get forcing files, etc.  # Get forcing files, etc.
31  # Example below is for cube46 on /nobackup2a/menemenl  # Example below is for cube78 on /nobackup2a/menemenl
32    
33  cd /nobackup2a/menemenl  cd /nobackup2a/menemenl
34  mkdir cube64  mkdir cube78
35  cd cube64  cd cube78
36  ln -sf ../run_template .  ln -sf ../run_template .
37  ln -sf ../ncep_rgau .  ln -sf ../cube78_forcing .
 ln -sf ../era40_fullres .  
   
38    
39  ##########################################################################  ##########################################################################
40  # getting the code from anonymous CVS server  # getting the code from anonymous CVS server
# Line 39  ln -sf ../era40_fullres . Line 52  ln -sf ../era40_fullres .
52  cvs co MITgcm_contrib/high_res_cube/README.cs510  cvs co MITgcm_contrib/high_res_cube/README.cs510
53  cvs co MITgcm_contrib/high_res_cube/code-mods  cvs co MITgcm_contrib/high_res_cube/code-mods
54  cvs co MITgcm_contrib/high_res_cube/input  cvs co MITgcm_contrib/high_res_cube/input
 cvs co MITgcm_contrib/high_res_cube/results  
55  cvs co MITgcm_code  cvs co MITgcm_code
56    
57    
58  ##########################################################################  ##########################################################################
59  # 510*510*6*50, 216-cpu cube sphere on altix with ifort  # 510*510*6*50, 216-cpu cube sphere on altix with ifort
60    
   
61  cd MITgcm  cd MITgcm
62  mkdir build run  mkdir build run
63  cd build  cd build
# Line 54  cd build Line 65  cd build
65  \cp ../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../MITgcm_contrib/high_res_cube/code-mods/* .
66  \cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
67  \cp SIZE.h_216 SIZE.h  \cp SIZE.h_216 SIZE.h
68  \cp packages.conf_hr packages.conf  ../tools/genmake2 -of ../../MITgcm_contrib/high_res_cube/code-mods/linux_ia64_ifort+mpi_altix_nas
 ../tools/genmake2 -mods=../code -of ../../MITgcm_contrib/high_res_cube/code-mods/linux_ia64_ifort+mpi_altix_nas  
69  make depend  make depend
70  make -j  make -j
71  cd ../run  cd ../run
72  \rm *  \rm *
73  \cp ../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../MITgcm_contrib/high_res_cube/input/* .
74  ln -sf ../../run_template/* .  ln -sf ../../run_template/* .
75  \rm pickup* eedata.mth data.pkg data.seaice data.exf_clim data.exf data.mnc data pr*  \rm pickup* *192_94* *.m D*1 E* G*all.bin L* W*10.bin h*[6-7] PHC*
76  \rm bathy_Hmin50.bin *192_94* *cs32* *.m lev* tren* job_c* job_altix150 job_altix92_54t  \mv data.exf_hr data.exf
77  ln -sf ../../run_template/pickup.0000000216.cube49 pickup.0000000216  \mv data_hr data
78  ln -sf ../../run_template/pickup_seaice.0000000216.cube48 pickup_seaice.0000000216  ln -sf ../../run_template/pickup.0000000216.cube78 pickup.0000000216
79    ln -sf ../../run_template/pickup_seaice.0000000216.cube78 pickup_seaice.0000000216
80    ln -sf ../../run_template/pickup.0000000216.meta.cube78 pickup.0000000216.meta
81    ln -sf ../../run_template/pickup_seaice.0000000216.meta.cube78 pickup_seaice.0000000216.meta
82  \cp ../build/mitgcmuv .  \cp ../build/mitgcmuv .
83  qsub job_altix  \mv job_altix cube78
84    qsub cube78
85    
86    
87    ##########################################################################
88    # generating initial pickup files for cube78
89    
90    data
91    # run for 4 days from time step 216 with 2-min time step
92     endtime=345600.,
93     deltaT=120.,
94     pChkptFreq=345600.,
95     monitorFreq=1.,
96    
97    cd ../../run_template
98    mv pickup.0000000216.cube78 pickup.0000000216.cube78_raw
99    mv pickup_seaice.0000000216.cube78 pickup_seaice.0000000216.cube78_raw
100    cd ../cube78/MITgcm/run
101    \mv pickup.0000002880.data ../../run_template/pickup.0000000216.cube78
102    \mv pickup_seaice.0000002880.data ../../run_template/pickup_seaice.0000000216.cube78
103    \mv pickup.0000002880.meta ../../run_template/pickup.0000000216.meta.cube78
104    \mv pickup_seaice.0000002880.meta ../../run_template/pickup_seaice.0000000216.meta.cube78
105    \rm *.meta *.data STD* cube78.o*
106    \cp ../../MITgcm_contrib/high_res_cube/input/data_hr data
107    ln -sf ../../run_template/pickup.0000000216.cube78 pickup.0000000216
108    ln -sf ../../run_template/pickup_seaice.0000000216.cube78 pickup_seaice.0000000216
109    ln -sf ../../run_template/pickup.0000000216.meta.cube78 pickup.0000000216.meta
110    ln -sf ../../run_template/pickup_seaice.0000000216.meta.cube78 pickup_seaice.0000000216.meta
111    qsub cube78
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