/[MITgcm]/MITgcm_contrib/high_res_cube/README.cs510
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revision 1.2 by dimitri, Sat Apr 7 23:57:59 2007 UTC revision 1.30 by dimitri, Thu Nov 8 05:23:55 2007 UTC
# Line 8  http://ecco2.org/products/model_setups/c Line 8  http://ecco2.org/products/model_setups/c
8    
9  UPDATES  UPDATES
10    
11  April 7, 2007: preparing for cube64  November 6, 2007. Cube 77 - same as cube75 but with SEAICE_SALINITY
12                                and era40_ecmwf_blend/cube59_GPCP forcing
13    November 3, 2007. Cube 76 - same as cube77 but 1979-2006 integration
14    August 31, 2007.  Cube75 - the second blend.
15    August 9, 2007. Cube74
16    August 6, 2007. Cube73
17    July 24, 2007. Cube72
18    July 8, 2007. Cube66: SEAICE_MULTICATEGORY, SEAICE_VARIABLE_FREEZING_POINT,
19       rhonil=1027.5, [temp/salt]AdvScheme=7, convertFW2Salt=-1, LSR_ERROR=1e-6
20       useRealFreshWaterFlux=.TRUE., runoff_lat_inc=179*1, SEAICE_salinity=10
21       bathyFile=GEBCO_510x6x510_ver06_dig.bin, HeffFile=heff_file8
22       SEAICE_availHeatFrac=.5, useGMRedi=.TRUE.
23    April 24, 2007. Cube65: Bryan and Lewis 1979 diffusivity
24       (cube67, cube68, and cube69 were carried out with cube65 code)
25    April 7 , 2007. Cube64: era40_fullres forcing
26    
27    
28  ##########################################################################  ##########################################################################
29  # Get forcing files, etc.  # Get forcing files, etc.
30  # Example below is for cube46 on /nobackup2a/menemenl  # Example below is for cube77 on /nobackup2a/menemenl
31    
32  cd /nobackup2a/menemenl  cd /nobackup2a/menemenl
33  mkdir cube64  mkdir cube77
34  cd cube64  cd cube77
35  ln -sf ../run_template .  ln -sf ../run_template .
36    ln -sf ../cube59_GPCP .
37    ln -sf ../era40_ecmwf_blend .
38  ln -sf ../ncep_rgau .  ln -sf ../ncep_rgau .
 ln -sf ../era40_fullres .  
   
39    
40  ##########################################################################  ##########################################################################
41  # getting the code from anonymous CVS server  # getting the code from anonymous CVS server
# Line 39  ln -sf ../era40_fullres . Line 53  ln -sf ../era40_fullres .
53  cvs co MITgcm_contrib/high_res_cube/README.cs510  cvs co MITgcm_contrib/high_res_cube/README.cs510
54  cvs co MITgcm_contrib/high_res_cube/code-mods  cvs co MITgcm_contrib/high_res_cube/code-mods
55  cvs co MITgcm_contrib/high_res_cube/input  cvs co MITgcm_contrib/high_res_cube/input
 cvs co MITgcm_contrib/high_res_cube/results  
56  cvs co MITgcm_code  cvs co MITgcm_code
57    
58    
59  ##########################################################################  ##########################################################################
60  # 510*510*6*50, 216-cpu cube sphere on altix with ifort  # 510*510*6*50, 216-cpu cube sphere on altix with ifort
61    
   
62  cd MITgcm  cd MITgcm
63  mkdir build run  mkdir build run
64  cd build  cd build
# Line 54  cd build Line 66  cd build
66  \cp ../../MITgcm_contrib/high_res_cube/code-mods/* .  \cp ../../MITgcm_contrib/high_res_cube/code-mods/* .
67  \cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .  \cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/* .
68  \cp SIZE.h_216 SIZE.h  \cp SIZE.h_216 SIZE.h
69  \cp packages.conf_hr packages.conf  ../tools/genmake2 -of ../../MITgcm_contrib/high_res_cube/code-mods/linux_ia64_ifort+mpi_altix_nas
 ../tools/genmake2 -mods=../code -of ../../MITgcm_contrib/high_res_cube/code-mods/linux_ia64_ifort+mpi_altix_nas  
70  make depend  make depend
71  make -j  make -j
72  cd ../run  cd ../run
73  \rm *  \rm *
74  \cp ../../MITgcm_contrib/high_res_cube/input/* .  \cp ../../MITgcm_contrib/high_res_cube/input/* .
75  ln -sf ../../run_template/* .  ln -sf ../../run_template/* .
76  \rm pickup* eedata.mth data.pkg data.seaice data.exf_clim data.exf data.mnc data pr*  \rm pickup* *192_94* *.m D*1 E* G*all.bin L* W*10.bin h*[6-7] PHC*JAN*
77  \rm bathy_Hmin50.bin *192_94* *cs32* *.m lev* tren* job_c* job_altix150 job_altix92_54t  \mv data.exf_hr data.exf
78  ln -sf ../../run_template/pickup.0000000216.cube49 pickup.0000000216  \mv data_hr data
79  ln -sf ../../run_template/pickup_seaice.0000000216.cube48 pickup_seaice.0000000216  ln -sf ../../run_template/pickup.0000000216.cube75 pickup.0000000216
80    ln -sf ../../run_template/pickup_seaice.0000000216.cube76 pickup_seaice.0000000216
81    ln -sf ../../run_template/pickup.0000000216.meta .
82    ln -sf ../../run_template/pickup_seaice.0000000216.meta .
83  \cp ../build/mitgcmuv .  \cp ../build/mitgcmuv .
84  qsub job_altix  \mv job_altix cube77
85    qsub cube77
86    
87    
88    ##########################################################################
89    # generating initial pickup files for cube74
90    
91    data.cal
92    # start on December 30 because of bug that does
93    # not allow a January 1, hour 0 start
94     startDate_1=19881230,
95    
96    data
97    # run for 4 days with 2-min time step
98     niter0=0,
99     endtime=345600.,
100     deltaT=120.,
101     pChkptFreq=345600.,
102     monitorFreq=1.,
103    
104    data.seaice
105    # set SEAICE_salinity to 33 to avoid initialization schock if
106    # ice is created or melts during first time step
107          HeffFile           = 'heff_file8',
108          SEAICE_salinity    = 33.,
109    
110    \mv pickup.0000002880.data ../../run_template/pickup.0000000216.cube74
111    \mv pickup_seaice.0000002880.data ../../run_template/pickup_seaice.0000000216.cube74
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