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dimitri | 
1.1 | 
Instructions for setting up a cube-sphere integration with sea-ice. | 
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================= | 
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UPDATES | 
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dimitri | 
1.42 | 
June 16, 2009. Cube85 -same as cube84 but with: | 
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   1. split north/south data.seaice parameters from regional optimizations | 
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   2. includes pkg/salt_plume in the Arctic and pkg/down_slope globally | 
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   3. initialize from T/S/U/V/ETAN and sea ice files | 
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   4. 3-day 3D diagnostics | 
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dimitri | 
1.38 | 
June 13, 2008. Cube 81 - same as cube79 but with | 
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dimitri | 
1.42 | 
   1. new values for data.seaice and data.exf | 
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   2. DIFFKR_2_20_1_lat6070_cube81, which has diffKrS/T=3.55e-7 in Arctic | 
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   3. GMRedi turned off | 
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dimitri | 
1.38 | 
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dimitri | 
1.37 | 
December 22, 2007. Cube80 - same as cube79 but with | 
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   SEAICE_BREAKS_VERIFICATION (SST relaxation depends on SIarea) | 
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   ALLOW_CLIMSST_RELAXATION to Reynold's daily 1/4-deg AVHRR analysis | 
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   ALLOW_CLIMSST_RELAXATION to monthly 1-deg WOA05 analysis | 
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December 2, 2007. Cube79 - same as cube78 (blend3) but with | 
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   useRelativeWind=.TRUE. and SEAICE_gamma_t=259200 | 
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dimitri | 
1.34 | 
November 22, 2007. Cube 78 - blend 3 | 
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dimitri | 
1.29 | 
November 6, 2007. Cube 77 - same as cube75 but with SEAICE_SALINITY | 
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                            and era40_ecmwf_blend/cube59_GPCP forcing | 
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November 3, 2007. Cube 76 - same as cube77 but 1979-2006 integration | 
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dimitri | 
1.24 | 
August 31, 2007.  Cube75 - the second blend. | 
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dimitri | 
1.21 | 
August 9, 2007. Cube74 | 
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dimitri | 
1.20 | 
August 6, 2007. Cube73 | 
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dimitri | 
1.18 | 
July 24, 2007. Cube72 | 
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dimitri | 
1.17 | 
July 8, 2007. Cube66: SEAICE_MULTICATEGORY, SEAICE_VARIABLE_FREEZING_POINT, | 
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dimitri | 
1.13 | 
   rhonil=1027.5, [temp/salt]AdvScheme=7, convertFW2Salt=-1, LSR_ERROR=1e-6 | 
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   useRealFreshWaterFlux=.TRUE., runoff_lat_inc=179*1, SEAICE_salinity=10 | 
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dimitri | 
1.16 | 
   bathyFile=GEBCO_510x6x510_ver06_dig.bin, HeffFile=heff_file8 | 
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dimitri | 
1.17 | 
   SEAICE_availHeatFrac=.5, useGMRedi=.TRUE. | 
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dimitri | 
1.10 | 
April 24, 2007. Cube65: Bryan and Lewis 1979 diffusivity | 
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dimitri | 
1.13 | 
   (cube67, cube68, and cube69 were carried out with cube65 code) | 
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dimitri | 
1.7 | 
April 7 , 2007. Cube64: era40_fullres forcing | 
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dimitri | 
1.1 | 
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########################################################################## | 
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# Get forcing files, etc. | 
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dimitri | 
1.42 | 
# Example below is for cube85 on /nobackup2a/menemenl | 
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dimitri | 
1.1 | 
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cd /nobackup2a/menemenl | 
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dimitri | 
1.42 | 
mkdir cube84 | 
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cd cube84 | 
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dimitri | 
1.1 | 
ln -sf ../run_template . | 
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dimitri | 
1.31 | 
ln -sf ../cube78_forcing . | 
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dimitri | 
1.34 | 
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dimitri | 
1.1 | 
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########################################################################## | 
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# getting the code from anonymous CVS server | 
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dimitri | 
1.2 | 
cvs co MITgcm_contrib/high_res_cube/README.cs510 | 
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dimitri | 
1.1 | 
cvs co MITgcm_contrib/high_res_cube/code-mods | 
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cvs co MITgcm_contrib/high_res_cube/input | 
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cvs co MITgcm_code | 
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########################################################################## | 
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dimitri | 
1.40 | 
# 510*510*6*50, 450-cpu cube sphere on altix with ifort | 
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dimitri | 
1.2 | 
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cd MITgcm | 
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mkdir build run | 
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cd build | 
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\rm * | 
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\cp ../../MITgcm_contrib/high_res_cube/code-mods/* . | 
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dimitri | 
1.42 | 
\cp ../../MITgcm_contrib/high_res_cube/code-mods/s216t_85x85/SIZE.h_216 SIZE.h  | 
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dimitri | 
1.41 | 
../tools/genmake2 -of linux_ia64_ifort+mpi_altix_nas | 
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dimitri | 
1.1 | 
make depend | 
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dimitri | 
1.42 | 
make -j 8 | 
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dimitri | 
1.2 | 
cd ../run | 
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dimitri | 
1.1 | 
\rm * | 
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dimitri | 
1.2 | 
\cp ../../MITgcm_contrib/high_res_cube/input/* . | 
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ln -sf ../../run_template/* . | 
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dimitri | 
1.31 | 
\rm pickup* *192_94* *.m D*1 E* G*all.bin L* W*10.bin h*[6-7] PHC* | 
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dimitri | 
1.42 | 
\mv data.seaice_hr data.seaice | 
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dimitri | 
1.15 | 
\mv data.exf_hr data.exf | 
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\mv data_hr data | 
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dimitri | 
1.1 | 
\cp ../build/mitgcmuv . | 
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dimitri | 
1.42 | 
\mv job_altix cube85 | 
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qsub cube85 |