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dimitri |
1.1 |
Instructions for setting up a cube-sphere integration |
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with sea-ice on the cs32 grid. Is meant to be used as |
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a preliminary sanity check for the cs510 configuration. |
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########################################################################## |
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# getting the code from anonymous CVS server |
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bash or sh shell: |
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$ export CVSROOT=':pserver:cvsanon@mitgcm.org:/u/gcmpack' |
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$ cvs login |
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( enter the CVS password: "cvsanon" ) |
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tcsh or csh shell: |
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$ setenv CVSROOT ':pserver:cvsanon@mitgcm.org:/u/gcmpack' |
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$ cvs login |
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( enter the CVS password: "cvsanon" ) |
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cvs co MITgcm_contrib/high_res_cube/README.cs32 |
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cvs co MITgcm_contrib/high_res_cube/code-mods |
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cvs co MITgcm_contrib/high_res_cube/input |
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cvs co MITgcm_contrib/high_res_cube/results |
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cvs co MITgcm_code |
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cvs co MITgcm/verification/global_ocean.cs32x15 |
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cvs co MITgcm/verification/tutorial_held_suarez_cs/input |
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########################################################################## |
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# 32*32*6*15, 1-cpu cube sphere |
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dimitri |
1.2 |
cd MITgcm |
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mkdir build run |
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cd build |
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\rm * |
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\cp ../../MITgcm_contrib/high_res_cube/code-mods/* . |
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\cp ../utils/exch2/code-mods/s12t_16x32/* . |
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dimitri |
1.3 |
ex - SIZE.h >> /dev/null <<EOF |
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/OLx = |
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c |
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& OLx = 5, |
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. |
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/OLy = |
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c |
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& OLy = 5, |
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. |
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w |
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q |
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EOF |
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dimitri |
1.1 |
\rm CPP_EEOPTIONS.h |
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dimitri |
1.2 |
../tools/genmake2 |
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make depend |
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make -j |
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cd ../run |
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dimitri |
1.1 |
\rm * |
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dimitri |
1.2 |
\cp ../verification/tutorial_held_suarez_cs/input/grid* . |
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\cp ../verification/global_ocean.cs32x15/input/lev_*_cs_15k.bin . |
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\cp ../verification/global_ocean.cs32x15/input/bathy_Hmin50.bin . |
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\cp ../../MITgcm_contrib/high_res_cube/input/* . |
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dimitri |
1.1 |
../build/mitgcmuv >& output.txt |
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dimitri |
1.3 |
emacs output.txt ../../MITgcm_contrib/high_res_cube/results/output.txt |
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dimitri |
1.1 |
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to use matlab to look at the output |
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matlab |
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for fld={'SIuice','SIvice','SIheff','SIarea','oceQsw', ... |
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'surForcT','oceTAUX','oceTAUY','surForcS'} |
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tmp=permute(readbin([fld{1} '.0000000072.data'],[32,6,32]),[1 3 2]); |
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cx=[min(tmp(:)) max(tmp(:))]; clf, plot_cube, title(fld{1}), pause |
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end |
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heff=permute(readbin(['SIheff.0000000072.data'],[32,6,32]),[1 3 2]); |
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mask=0*heff; mask(find(heff>.001))=1; |
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uice=mask.*permute(readbin(['SIuice.0000000072.data'],[32,6,32]),[1 3 2]); |
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vice=mask.*permute(readbin(['SIvice.0000000072.data'],[32,6,32]),[1 3 2]); |
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clf |
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subplot(221), mypcolor(uice(:,:,3)'); colorbar, title('uice, tile 3') |
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subplot(222), mypcolor(uice(:,:,6)'); colorbar, title('uice, tile 6') |
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subplot(223), mypcolor(vice(:,:,3)'); colorbar, title('vice, tile 3') |
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subplot(224), mypcolor(vice(:,:,6)'); colorbar, title('vice, tile 6') |
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dimitri |
1.2 |
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dimitri |
1.1 |
########################################################################## |
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# 32*32*6*15, 17-tile, 1-cpu cube sphere experiment |
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dimitri |
1.2 |
# needs fixing; does not work as of checkpoint58x_post |
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# see discussion on MITgcm-devel |
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dimitri |
1.1 |
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cd ../build |
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\rm * |
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dimitri |
1.2 |
\cp ../../MITgcm_contrib/high_res_cube/code-mods/* . |
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\cp ../verification/global_ocean.cs32x15/code_alt/code.176t_8x4/* . |
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\rm CPP_EEOPTIONS.h |
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../tools/genmake2 |
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dimitri |
1.1 |
make depend |
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dimitri |
1.2 |
make -j |
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cd ../run |
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\rm * |
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\cp ../verification/tutorial_held_suarez_cs/input/grid* . |
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\cp ../verification/global_ocean.cs32x15/input/lev_*_cs_15k.bin . |
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\cp ../verification/global_ocean.cs32x15/input/bathy_Hmin50.bin . |
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\cp ../../MITgcm_contrib/high_res_cube/input/* . |
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dimitri |
1.1 |
../build/mitgcmuv >& output.txt |
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dimitri |
1.2 |
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dimitri |
1.1 |
########################################################################## |
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dimitri |
1.4 |
# 32*32*6*15, 2-cpu cube sphere on the NAS altices with ifort |
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dimitri |
1.1 |
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dimitri |
1.2 |
cd MITgcm |
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mkdir build run |
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cd build |
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\rm * |
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\cp ../../MITgcm_contrib/high_res_cube/code-mods/* . |
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\cp ../utils/exch2/code-mods/s12t_16x32/* . |
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dimitri |
1.5 |
\mv SIZE.h_mpi SIZE.h |
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dimitri |
1.3 |
../tools/genmake2 -of ../../MITgcm_contrib/high_res_cube/code-mods/linux_ia64_ifort+mpi_altix_nas |
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dimitri |
1.1 |
make depend |
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make -j |
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dimitri |
1.2 |
cd ../run |
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\rm * |
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\cp ../verification/tutorial_held_suarez_cs/input/grid* . |
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\cp ../verification/global_ocean.cs32x15/input/lev_*_cs_15k.bin . |
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\cp ../verification/global_ocean.cs32x15/input/bathy_Hmin50.bin . |
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\cp ../../MITgcm_contrib/high_res_cube/input/* . |
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dimitri |
1.1 |
mpirun -np 2 ../build/mitgcmuv |
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dimitri |
1.4 |
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########################################################################## |
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# 32*32*6*15, 2-cpu cube sphere on the JPL altices with ifort |
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cd MITgcm |
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mkdir build run |
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cd build |
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\rm * |
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\cp ../../MITgcm_contrib/high_res_cube/code-mods/* . |
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\cp ../utils/exch2/code-mods/s12t_16x32/* . |
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dimitri |
1.5 |
\mv SIZE.h_mpi SIZE.h |
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dimitri |
1.4 |
../tools/genmake2 -of ../tools/build_options/linux_ia64_ifort+mpi_altix_jpl |
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make depend |
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make -j |
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cd ../run |
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\rm * |
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\cp ../verification/tutorial_held_suarez_cs/input/grid* . |
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\cp ../verification/global_ocean.cs32x15/input/lev_*_cs_15k.bin . |
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\cp ../verification/global_ocean.cs32x15/input/bathy_Hmin50.bin . |
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\cp ../../MITgcm_contrib/high_res_cube/input/* . |
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mpirun -np 2 ../build/mitgcmuv |
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