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16-Oct-2006 |
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heimbach@mit.edu, cnh@mit.edu |
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Brief instructions for building and running |
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Exp. 1: For advect diffuse test (injects dye every timestep at one point and advects with a fixed flow field) |
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------- |
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cd build |
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rm -fr * |
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../../../tools/genmake2 -mods ../code |
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make depend |
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make |
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ln -s ../input/* . |
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ln -s ../input_fields/* . |
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./mitgcmuv >& output |
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------- |
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Exp. 2a: Adjoint of advect-diffuse: |
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------- --->>> 1 tile per cube face (32x32), single-processor <<<--- |
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cd build_ad/ |
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rm -fr * |
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\cp -f ../code_ad/topol_32x32/* . |
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../../../tools/genmake2 -mods ../code_ad |
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### ../../../../MITgcm/tools/genmake2 -rootdir ../../../../MITgcm -mods ../code_ad |
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make depend |
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make adtaf |
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make adall |
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ln -s ../input_ad/* . |
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ln -s ../input_fields/* . |
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./mitgcmuv_ad >! output_adm.txt_32x32 & |
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------- |
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Exp. 2b: Adjoint of advect-diffuse: |
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------- --->>> 4 tiles per cube face (16x16), single-processor <<<--- |
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cd build_ad/ |
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rm -fr * |
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\cp -f ../code_ad/topol_16x16/* . |
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../../../tools/genmake2 -mods ../code_ad |
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### ../../../../MITgcm/tools/genmake2 -rootdir ../../../../MITgcm -mods ../code_ad |
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make depend |
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make adtaf |
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make adall |
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ln -s ../input_ad/* . |
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ln -s ../input/*.bin . |
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ln -s ../input/*.mitgrid . |
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./mitgcmuv_ad >! output_adm.txt_16x16 & |
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------- |
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Exp. 2c: TLM of advect-diffuse: |
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------- --->>> 4 tiles per cube face (16x16), single-processor <<<--- |
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cd build_ad/ |
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rm -fr * |
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\cp -f ../code_ad/topol_16x16/* . |
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../../../tools/genmake2 -mods ../code_ad |
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### ../../../../MITgcm/tools/genmake2 -rootdir ../../../../MITgcm -mods ../code_ad |
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make depend |
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make ftltaf |
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make ftlall |
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ln -s ../input_ad/* . |
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ln -s ../input/*.bin . |
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ln -s ../input/*.mitgrid . |
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./mitgcmuv_ftl >! output_tlm.txt_16x16 & |
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------- |
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Exp. 2d: Adjoint of advect-diffuse: |
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------- --->>> 4 tiles per cube face (16x16), 4-processor MPI <<<--- |
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cd build_ad/ |
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rm -fr * |
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\cp -f ../code_ad/topol_16x16/* . |
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\cp -f SIZE.h_mpi SIZE.h |
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../../../tools/genmake2 -mpi -mods ../code_ad |
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### ../../../../MITgcm/tools/genmake2 -rootdir ../../../../MITgcm -mpi -mods ../code_ad |
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make depend |
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make adtaf |
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make adall |
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ln -s ../input_ad/* . |
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ln -s ../input/*.bin . |
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ln -s ../input/*.mitgrid . |
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mpirun -np 4 ./mitgcmuv_ad |
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Exp. 4: Adjoint of full code: |
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cd build_ad_full/ |
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rm -fr * |
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../../../tools/genmake2 -mods ../code_ad_full |
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make depend |
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make adtaf |
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make adall |
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ln -s ../input_ad_full/* . |
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./mitgcmuv_ad >! output_adm.txt & |
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------- |
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Exp. 5: TLM of full code: |
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------- |
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cd build_ad_full/ |
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rm -fr * |
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../../../tools/genmake2 -mods ../code_ad_full |
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make depend |
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make ftltaf |
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make ftlall |
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ln -s ../input_ad_full/* . |
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./mitgcmuv_ftl >! output_tlm.txt & |
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