/[MITgcm]/MITgcm_contrib/heimbach/cs_adj_advdiff/README
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revision 1.1 by heimbach, Tue Oct 17 21:46:48 2006 UTC revision 1.2 by heimbach, Tue Nov 14 14:40:14 2006 UTC
# Line 5  heimbach@mit.edu, cnh@mit.edu Line 5  heimbach@mit.edu, cnh@mit.edu
5  Brief instructions for building and running  Brief instructions for building and running
6    
7  -------  -------
8  Exp. 1: For diffuse only test (just diffuses a patch of dye)  Exp. 1: For advect diffuse test (injects dye every timestep at one point and advects with a fixed flow field)
9  -------  -------
10    
11   cd build   cd build
12   rm -fr *   rm -fr *
13   ../../../tools/genmake2 -mods ../code   ../../../tools/genmake2 -mods  ../code
14   make depend   make depend
15   make   make
16   ln -s ../input/* .   ln -s ../input/* .
17     ln -s ../input_fields/* .
18   ./mitgcmuv >& output   ./mitgcmuv >& output
19    
20  -------  -------
21  Exp. 2: For advect diffuse test (injects dye every timestep at one point and advects with a fixed flow field)  Exp. 2a: Adjoint of advect-diffuse:
22  -------  -------  --->>> 1 tile per cube face (32x32), single-processor <<<---
23    
24   cd build   cd build_ad/
25   rm -fr *   rm -fr *
26   ../../../tools/genmake2 -mods "../code_advdiff ../code"   \cp -f ../code_ad/topol_32x32/* .
27     ../../../tools/genmake2 -mods ../code_ad
28    ### ../../../../MITgcm/tools/genmake2 -rootdir ../../../../MITgcm -mods ../code_ad
29   make depend   make depend
30   make   make adtaf
31   ln -s ../input_advdiff/* .   make adall
32   ln -s ../input/* .  
33   ./mitgcmuv >& output   ln -s ../input_ad/* .
34     ln -s ../input_fields/* .
35     ./mitgcmuv_ad >! output_adm.txt &
36    
37    
38  -------  -------
39  Exp. 3: Adjoint of advect-diffuse:  Exp. 2b: Adjoint of advect-diffuse:
40  -------  -------  --->>> 4 tiles per cube face (16x16), single-processor <<<---
41    
42   cd build_ad/   cd build_ad/
43   rm -fr *   rm -fr *
44     \cp -f ../code_ad/topol_16x16/* .
45   ../../../tools/genmake2 -mods ../code_ad   ../../../tools/genmake2 -mods ../code_ad
46    ### ../../../../MITgcm/tools/genmake2 -rootdir ../../../../MITgcm -mods ../code_ad
47   make depend   make depend
48   make adtaf   make adtaf
49   make adall   make adall
50    
51   ln -s ../input_ad/* .   ln -s ../input_ad/* .
52   ln -s ../input_advdiff/pickup.0000072020.* .   ln -s ../input/*.bin .
53     ln -s ../input/*.mitgrid .
54   ./mitgcmuv_ad >! output_adm.txt &   ./mitgcmuv_ad >! output_adm.txt &
55    
56    -------
57    Exp. 2c: Adjoint of advect-diffuse:
58    -------  --->>> 4 tiles per cube face (16x16), 4-processor MPI <<<---
59    
60     cd build_ad/
61     rm -fr *
62     \cp -f ../code_ad/topol_16x16/* .
63     \cp -f SIZE.h_mpi SIZE.h
64     ../../../tools/genmake2 -mpi -mods ../code_ad
65    ### ../../../../MITgcm/tools/genmake2 -rootdir ../../../../MITgcm -mpi -mods ../code_ad
66     make depend
67     make adtaf
68     make adall
69    
70     ln -s ../input_ad/* .
71     ln -s ../input/*.bin .
72     ln -s ../input/*.mitgrid .
73     mpirun -np 4 ./mitgcmuv_ad
74    
75  -------  -------
76  Exp. 4: Adjoint of full code:  Exp. 4: Adjoint of full code:
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