code_shallow_openad/RefTrans/doDiff.bash

for i in "ad_input_code_sf.f" "ad_input_code_sf.w2f.f" "ad_input_code_sf.w2f.canon.f" "ad_input_code_sf.w2f.canon.xaif" "ad_input_code_sf.w2f.canon.xb.xaif" "ad_input_code_sf.w2f.canon.xb.x2w.w2f.f" "ad_input_code_sf.w2f.canon.xb.x2w.w2f.rs.f" "ad_input_code_sf.w2f.canon.xb.x2w.w2f.rs.pp.f" "ad_input_code.w2f.canon.xb.x2w.w2f.rs.pp.f" "m.out"
do 
  echo "$i old reference (<) vs new file (>)"
  echo "------------------------------------------------------------------------------" 
  diff -I "file translated from " $i ../../../../../MITgcm/verification/OpenAD/build_shallow_openad/$i
  if [ $? -ne 0  -a -z "$BATCHMODE" ] 
  then 
    echo "update reference for $i? [y]/n "
    read answer
    if [ "$answer" == "n" ] 
    then 
      echo "not updated"
    else
      echo "copying"
      cp ../../../../../MITgcm/verification/OpenAD/build_shallow_openad/$i $i
    fi
  fi
done
1	utke	1.3	for i in "ad_input_code_sf.f" "ad_input_code_sf.w2f.f" "ad_input_code_sf.w2f.canon.f" "ad_input_code_sf.w2f.canon.xaif" "ad_input_code_sf.w2f.canon.xb.xaif" "ad_input_code_sf.w2f.canon.xb.x2w.w2f.f" "ad_input_code_sf.w2f.canon.xb.x2w.w2f.rs.f" "ad_input_code_sf.w2f.canon.xb.x2w.w2f.rs.pp.f" "ad_input_code.w2f.canon.xb.x2w.w2f.rs.pp.f" "m.out"
2	utke	1.1	do
3	utke	1.4	echo "$i old reference (<) vs new file (>)"
4			echo "------------------------------------------------------------------------------"
5			diff -I "file translated from " $i ../../../../../MITgcm/verification/OpenAD/build_shallow_openad/$i
6			if [ $? -ne 0 -a -z "$BATCHMODE" ]
7			then
8			echo "update reference for $i? [y]/n "
9			read answer
10			if [ "$answer" == "n" ]
11			then
12			echo "not updated"
13			else
14			echo "copying"
15			cp ../../../../../MITgcm/verification/OpenAD/build_shallow_openad/$i $i
16			fi
17			fi
18	utke	1.1	done