/[MITgcm]/MITgcm_contrib/heimbach/OpenAD/code_regress/genmake2

Diff of /MITgcm_contrib/heimbach/OpenAD/code_regress/genmake2

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-revision 1.10 by utke,
Tue Jul 15 16:28:35 2008 UTC
+revision 1.13 by utke,
Mon Aug 25 17:56:09 2008 UTC
 Line 2293 
 printf 'NON_AD_F77_SRC_FILES = ' > nonAD
  printf 'C_SRC_FILES = '   > csrclist.tmp
  printf 'F90_SRC_FILES = ' > F90srclist.tmp
  printf 'H_SRC_FILES = '   > hsrclist.tmp
+ printf 'AD_FLOW_FILES = ' > ad_flow_files.tmp
  alldirs="$SOURCEDIRS $INCLUDEDIRS ."
  for d in $alldirs ; do
      deplist=
-Line 2368 
 for d in $alldirs ; do
+Line 2369 
 for d in $alldirs ; do
                          echo    " \\"  >> hsrclist.tmp
                          printf " $sf" >> hsrclist.tmp
                          ;;
+                     flow)
+                         echo    " \\"  >> ad_flow_files.tmp
+                         printf " $sf" >> ad_flow_files.tmp
+                         ;;
                     esac
                  fi
              fi
-Line 2378 
 for d in $alldirs ; do
+Line 2383 
 for d in $alldirs ; do
          echo "" >> srclinks.tmp
          echo "#  These files are linked from $d" >> srclinks.tmp
          echo "$deplist :" >> srclinks.tmp
-         printf "\t\$(LN) %s/\$@ \$@\n" $d >> srclinks.tmp
+ # We need to make sure that the link isn't already there.
+ # This may happen when make thinks that a header file has to be "remade"
+ # because a module it depends on has changed.  In this case we do nothing.
+         printf "\tif [ ! -L \$@ ]; then \$(LN) %s/\$@ \$@; fi\n" $d >> srclinks.tmp
        fi
      fi
  done
-Line 2393 
 echo "" >> nonADF77srclist.tmp
+Line 2401 
 echo "" >> nonADF77srclist.tmp
  echo "" >> csrclist.tmp
  echo "" >> F90srclist.tmp
  echo "" >> hsrclist.tmp
+ echo "" >> ad_flow_files.tmp
  if test -f $MAKEFILE ; then
      mv -f $MAKEFILE "$MAKEFILE.bak"
-Line 2510 
 cat nonADF77srclist.tmp >> $MAKEFILE
+Line 2519 
 cat nonADF77srclist.tmp >> $MAKEFILE
  cat csrclist.tmp        >> $MAKEFILE
  cat F90srclist.tmp      >> $MAKEFILE
  cat hsrclist.tmp        >> $MAKEFILE
+ cat ad_flow_files.tmp   >> $MAKEFILE
- rm -f F77srclist.tmp nonADF77srclist.tmp csrclist.tmp hsrclist.tmp flist.tmp clist.tmp F90srclist.tmp
+ rm -f F77srclist.tmp nonADF77srclist.tmp csrclist.tmp F90srclist.tmp hsrclist.tmp ad_flow_files.tmp
  echo >> $MAKEFILE
-Line 2523 
 echo >> $MAKEFILE
+Line 2533 
 echo >> $MAKEFILE
  echo 'F77_PP_SRC_FILES = $(F77_SRC_FILES:.F=.'$FS')'      >> $MAKEFILE
  echo 'F90_PP_SRC_FILES = $(F90_SRC_FILES:.F90=.'$FS90')' >> $MAKEFILE
+ echo 'OBJFILES= $(F77_SRC_FILES:.F=.o) $(C_SRC_FILES:.c=.o) $(F90_SRC_FILES:.F90=.o)' >> $MAKEFILE
+ echo 'FLOFILES =  $(AD_FLOW_FILES:.flow=.flowdir)' >> $MAKEFILE
  echo >> $MAKEFILE
  echo '.SUFFIXES:' >> $MAKEFILE
- echo '.SUFFIXES: .o .'$FS' .p .F .c .f'$FS90' .'$FS90' .FF90 .F90' >> $MAKEFILE
+ echo '.SUFFIXES: .o .'$FS' .p .F .c .f'$FS90' .'$FS90' .FF90 .F90 .flowdir .flow' >> $MAKEFILE
  cat >>$MAKEFILE <<EOF
- # all the source files linked from the various locations:
+ all: \$(EXECUTABLE)
- ALL_LINKED_FILES= \
+ \$(EXECUTABLE): \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(OBJFILES) \$(EMBEDDED_FILES)
- \$(F77_SRC_FILES) \
+         @echo Creating \$@ ...
- \$(C_SRC_FILES) \
+         \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
- \$(H_SRC_FILES) \
+ depend:
- \$(F90_SRC_FILES) \
+         @make links
- \$(SPECIAL_FILES)
- all: depend \$(EXECUTABLE)
- depend: \$(ALL_LINKED_FILES)
          \$(MAKEDEPEND) -o .$FS \$(DEFINES) \$(INCLUDES) \$(F77_SRC_FILES)
          \$(TOOLSDIR)/f90mkdepend >> \$(MAKEFILE)
          -rm -f makedepend.out
- .PHONY: depend
+ lib: libmitgcmuv.a
- OBJFILES= \$(F77_SRC_FILES:.F=.o) \$(C_SRC_FILES:.c=.o) \$(F90_SRC_FILES:.F90=.o)
+ libmitgcmuv.a: \$(OBJFILES)
+         ar rcv libmitgcmuv.a \$(OBJFILES)
+         ar d   libmitgcmuv.a main.o
- \$(EXECUTABLE): \$(OBJFILES)
+ links: \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(SPECIAL_FILES)
-         @echo Creating \$@ ...
-         \$(LINK) -o \$@ \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) \$(LIBS)
+ small_f: \$(F77_PP_SRC_FILES) \$(F90_PP_SRC_FILES)
  output.txt: \$(EXECUTABLE)
          @printf 'running ... '
          @\$(EXECUTABLE) > \$@
+ clean:
+         -rm -rf *.p *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template
+         -rm -rf *.o
+         -rm -rf *.$FS *.flowdir
+         -rm -rf *.f$FS90 *_mod.h *_mod.F90 *.FF90 *.mod-whirl ad_input*
+         -rm -rf temp.sed reslice.dat
+ Clean:
+         @make clean
+         @make cleanlinks
+         -rm -f \$(SPECIAL_FILES)
+         -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log f90mkdepend.log *.bak
+         -rm -f taf_command taf_output taf_ad.log taf_ad_flow.log
+ CLEAN:
+         @make Clean
+         -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
+         -find \$(EXEDIR) -name "*.data" -exec rm {} \;
+         -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
+         -rm -f \$(EXECUTABLE) \$(EXE_AD) *.txt STD* *diagnostics.log datetime
+         -rm -f *_MIT_CE_000.opt0000 costfunction*0000
+         -rm -rf mnc_test_*
+ #eh3 Makefile: makefile
+ makefile:
+         $THIS_SCRIPT $G2ARGS
+ cleanlinks:
+         -find . -type l -exec rm {} \;
  # Special targets (SPECIAL_FILES) which are created by make
  ${PACKAGES_DOT_H}:
          @echo Creating \$@ ...
-Line 2576 
 test ! "x$THISUSER" = x && echo "      -echo
+Line 2612 
 test ! "x$THISUSER" = x && echo "      -echo
  test ! "x$THISDATE" = x && echo "       -echo \"#define THISDATE '$THISDATE'\" >> \$@" >> $MAKEFILE
  test ! "x$THISHOST" = x && echo "       -echo \"#define THISHOST '$THISHOST'\" >> \$@" >> $MAKEFILE
+ if test "x$EMBED_SRC" = xt ; then
+     cat >>$MAKEFILE <<EOF
+ decode_files.o : EMBEDDED_FILES.h
+ ##  \$(F77_PP_SRC_FILES)
+ all_fF.tar.gz : \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile
+         @echo Creating \$@ ...
+         -tar -hcf all_fF.tar \$(SPECIAL_FILES) \$(F77_SRC_FILES) \$(C_SRC_FILES) \$(H_SRC_FILES) \$(F90_SRC_FILES) \$(F77_PP_SRC_FILES) Makefile
+         -rm -f all_fF.tar.gz
+         -gzip all_fF.tar
+ EMBEDDED_FILES.h : all_fF.tar.gz
+         @echo Creating \$@ ...
+         -\${ROOTDIR}/tools/embed_encode/encode_files EMBEDDED_FILES.h all_fF.tar.gz
+ EOF
+ fi
  cat >>$MAKEFILE <<EOF
  # The normal chain of rules is (  .F - .$FS - .o  )
-Line 2597 
 cat >>$MAKEFILE <<EOF
+Line 2652 
 cat >>$MAKEFILE <<EOF
          \$(F90C) \$(F90FLAGS) \$(F90OPTIM) -c \$(F90FIXEDFORMAT) \$<
  .c.o:
          \$(CC) \$(CFLAGS) \$(DEFINES) \$(INCLUDES) -c \$<
+ .flow.flowdir:
+         \$(CPP) \$(DEFINES) \$(INCLUDES) > \$@
  # Special exceptions that use the ( .F - .p - .$FS - .o ) rule-chain
  .F.p:
-Line 2604 
 cat >>$MAKEFILE <<EOF
+Line 2661 
 cat >>$MAKEFILE <<EOF
  .p.$FS:
          \$(KPP) \$(KFLAGS1)\$@ \$(KFLAGS2) \$<
+ EOF
  #=========================================
- #===  Cleanup Rules  ===
+ #===  Automatic Differentiation Rules  ===
+ #===  for TAMC/TAF  ======================
- CLEAN: Clean
+ if test "x$OPENAD" == x ; then
-         -find \$(EXEDIR) -name "*.meta" -exec rm {} \;
-         -find \$(EXEDIR) -name "*.data" -exec rm {} \;
-         -find \$(EXEDIR) -name "fort.*" -exec rm {} \;
-         -rm -f \$(EXECUTABLE) output.txt ad_output.txt STD*
- Clean: clean cleanlinks
+ cat >>$MAKEFILE <<EOF
-         -rm -f *.F
-         -rm -f \$(SPECIAL_FILES)
-         -rm -f genmake_state genmake_*optfile genmake_warnings make.log run.log *.bak
- clean:
+ TAMC           = ${TAMC}
-         -rm -rf *.o *.$FS *.p *.f$FS90 *.$FS90 *.mod ${RMFILES} work.{pc,pcl} *.template *_mod.h *_mod.F90 *.FF90 *.mod-whirl ad_input*
+ TAF            = ${TAF}
-         -rm -rf temp.sed reslice.dat
- cleanlinks:
+ TAF_EXTRA      = ${TAF_EXTRA}
-         -find . -type l -exec rm {} \;
+ TAMC_EXTRA     = ${TAMC_EXTRA}
- .PHONY: clean Clean CLEAN
+ EOF
+ ad_vars="AD_TAMC_FLAGS AD_TAF_FLAGS"
+ ad_vars="$ad_vars FTL_TAMC_FLAGS FTL_TAF_FLAGS"
+ ad_vars="$ad_vars SVD_TAMC_FLAGS SVD_TAF_FLAGS"
+ for i in $ad_vars ; do
+     name=$i
+     t1="t2=\$"`echo "$i"`
+     eval $t1
+     printf "%-20s = " $name >> $MAKEFILE
+     echo "$t2" | sed -e 's| \+| |g' >> $MAKEFILE
+ done
- #=========================================
+ echo "  Add the source list for AD code generation"
- #===  self regeneration  ===
+ echo >> $MAKEFILE
- # can't call this target  "Makefile"
+ printf "AD_FILES = " >> $MAKEFILE
- # because unfortunately the genmake script
+ AD_FILES=`cat ad_files`
- # invoked here uses
+ for i in $AD_FILES ; do
- # make itself for checking things and we
+     echo    " \\" >> $MAKEFILE
- # end up in a recursion.
+     printf " $i" >> $MAKEFILE
+ done
+ echo >> $MAKEFILE
+ rm -f ad_files
- makefile:
+ cat >>$MAKEFILE <<EOF
-         $THIS_SCRIPT $G2ARGS
+ # ... AD ...
+ adall: \$(EXE_AD)
+ adtaf: ad_taf_output.$FS
+ adtamc: ad_tamc_output.$FS
+ ad_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES)
+         @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -DALLOW_ADJOINT_RUN -UALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ad_config.template
+         cmp ad_config.template AD_CONFIG.h || cat ad_config.template > AD_CONFIG.h
+         -rm -f ad_config.template
+         @make \$(F77_PP_SRC_FILES)
+         @make \$(FLOFILES)
+         cat \$(FLOFILES) \$(AD_FILES) > ad_input_code.$FS
+ ad_taf_output.$FS: ad_input_code.$FS
+         \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
+         ls -l ad_input_code_ad.$FS
+         cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
+ adtafonly:
+         \$(TAF) \$(AD_TAF_FLAGS) \$(TAF_EXTRA) ad_input_code.$FS
+         ls -l ad_input_code_ad.$FS
+         cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_taf_output.$FS
+ \${EXE_AD}: ad_taf_output.o \$(OBJFILES)
+         \$(LINK) -o \${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o \$(LIBS)
+ ad_tamc_output.$FS: ad_input_code.$FS
+         \$(TAMC) \$(AD_TAMC_FLAGS) \$(TAMC_EXTRA) ad_input_code.$FS
+         cat ad_input_code_ad.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ad_tamc_output.$FS
+ ad_tamc: ad_tamc_output.o \$(OBJFILES)
+         \$(LINK) -o ${EXE_AD} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_tamc_output.o \$(LIBS)
+ adonlyfwd:
+         patch < \$(TOOLSDIR)/ad_taf_output.f.onlyfwd.diff
+ adtrick:
+         patch < \$(TOOLSDIR)/ad_taf_output.f.adtrick.diff
+ # ... FTL ...
+ ftlall: ftl_taf
+ ftltaf: ftl_taf_output.$FS
+ ftltamc: ftl_tamc_output.$FS
+ ftl_input_code.$FS: \$(AD_FILES) \$(H_SRC_FILES)
+         @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
+         cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
+         -rm -f ftl_config.template
+         @make \$(F77_PP_SRC_FILES)
+         @make \$(AD_FLOW_FILES)
+         cat \$(AD_FLOW_FILES) \$(AD_FILES) > ftl_input_code.$FS
+ ftl_taf_output.$FS: ftl_input_code.$FS
+         \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
+         ls -l ftl_input_code_ftl.$FS
+         cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
+ ftltafonly:
+         \$(TAF) \$(FTL_TAF_FLAGS) \$(TAF_EXTRA) ftl_input_code.$FS
+         ls -l ftl_input_code_ftl.$FS
+         cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_taf_output.$FS
+ ftl_taf: ftl_taf_output.o \$(OBJFILES)
+         \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_taf_output.o \$(LIBS)
+ ftl_tamc_output.$FS: ftl_input_code.$FS
+         \$(TAMC) \$(FTL_TAMC_FLAGS) \$(TAMC_EXTRA) ftl_input_code.$FS
+         cat ftl_input_code_ftl.$FS | sed -f \$(TOOLSDIR)/adjoint_sed > ftl_tamc_output.$FS
+ ftl_tamc: ftl_tamc_output.o \$(OBJFILES)
+         \$(LINK) -o ${EXE_FTL} \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ftl_tamc_output.o \$(LIBS)
+ # ... SVD ...
+ svdtaf: ad_taf_output.$FS ftl_taf_output.$FS
+         @echo "--->>> Only ran TAF to generate SVD code!    <<<---"
+         @echo "--->>> Do make svdall afterwards to compile. <<<---"
+ svdall: svd_touch svd_taf
+ svd_taf: \$(OBJFILES)
+         \$(LINK) -o mitgcmuv_svd \$(FFLAGS) \$(FOPTIM) \$(OBJFILES) ad_taf_output.o ftl_taf_output.o \$(LIBS)
+         @echo "--->>> Only COMPILE svd code! <<<---"
+         @echo "--->>> Assumes you previously <<<---"
+         @echo "--->>> did make svdtaf        <<<---"
+ svd_touch:
+         @echo "--->>> Only COMPILE svd code! <<<---"
+         @echo "--->>> Assumes you previously <<<---"
+         @echo "--->>> did make svdtaf        <<<---"
+         touch ad_taf_output.$FS ftl_taf_output.$FS
+         \$(FC) \$(FFLAGS) \$(FOPTIM) -c ad_taf_output.$FS
+         \$(FC) \$(FFLAGS) \$(FOPTIM) -c ftl_taf_output.$FS
+         @$BASH\$(TOOLSDIR)/convert_cpp_cmd2defines "Warning - this file is automatically generated - do NOT edit" -UALLOW_ADJOINT_RUN -DALLOW_TANGENTLINEAR_RUN -UALLOW_ECCO_OPTIMIZATION > ftl_config.template
+         cmp ftl_config.template AD_CONFIG.h || cat ftl_config.template > AD_CONFIG.h
+         -rm -f ftl_config.template
+ EOF
- # because the file is called Makefile
+ fi
- .PHONY: makefile
- #====================================
+ #===  for OpenAD  ========================
- #===  Automatic Differentiation   ===
+ if test "x$OPENAD" != x ; then
+ # ============ begin OpenAD specific section ==============
+ cat >>$MAKEFILE <<EOF
+ # all the source files linked from the various locations:
+ ALL_LINKED_FILES= \
+ \$(F77_SRC_FILES) \
+ \$(C_SRC_FILES) \
+ \$(H_SRC_FILES) \
+ \$(F90_SRC_FILES) \
+ \$(SPECIAL_FILES)
  ifndef OPENADROOT
    \$(error "Error:  environment variable OPENADROOT not defined!")
-Line 2689 
 done
+Line 2864 
 done
  echo >> $MAKEFILE
  rm -f adSrcFiles.tmp
  cat >>$MAKEFILE <<EOF
- .PHONY: adAll
  adAll: \$(EXE_AD) ncheckLev.conf
+ .PHONY: adAll
  CB2M_F90_PP_SRC_FILES=\$(addsuffix _mod.f$FS90, \$(CB2M_F90_SRC_NAMES))
-Line 2746 
 openad: ad_input_code.w2f.canon.xb.x2w.w
+Line 2920 
 openad: ad_input_code.w2f.canon.xb.x2w.w
  # change everybody else to use the new module files:
  %_cb2m.FF90 : %.F ${MODS}/cb2mUseModules.bash
-         ${MODS}/cb2mUseModules.bash $<
+         ${MODS}/cb2mUseModules.bash $< ${MPI}
  # makefile debug rule
  small_f: \$(CB2M_F90_PP_SRC_FILES)
-Line 2863 
 whirl2f whirl2f_be:
+Line 3037 
 whirl2f whirl2f_be:
  openad_adm:
          \$(LN) \${XAIFBOOSTERROOT}/xaifBooster/algorithms/BasicBlockPreaccumulationReverse/test/t \$@
+ # ============ end OpenAD specific section ==============
  EOF
+ fi
+ #=========================================
  if test "x$EXEHOOK" != x ; then
      printf "\nexehook:\n\t%s\n" $EXEHOOK >> $MAKEFILE
  fi
-Line 2894 
 echo "  Add rules for links"
+Line 3074 
 echo "  Add rules for links"
  cat srclinks.tmp >> $MAKEFILE
  rm -f srclinks.tmp
+ echo "  Adding makedepend marker"
+ printf "\n\n# DO NOT DELETE\n" >> $MAKEFILE
  printf "\n===  Done  ===\n"
  # Create special header files

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