gael/profilesMatlabProcessing/profiles_process_init.m


global MITprof_verbose; %to print notes to screen
if isempty(MITprof_verbose); MITprof_verbose=2; end;

if MITprof_verbose;
fprintf('adding directories to your path\n');
fprintf('===============================\n\n')
end;

global mydir; mydir=[pwd '/'];
fid=fopen([mydir 'MITprof_path.m'],'wt');
aa=sprintf(['global mydir; mydir=''' mydir ''';\n']);
aa=sprintf([aa 'addpath ' mydir ';\n']);
aa=sprintf([aa 'addpath ' mydir 'profiles_IO_v2/;\n']);
aa=sprintf([aa 'addpath ' mydir 'profiles_IO_external/;\n']);
aa=sprintf([aa 'addpath ' mydir 'profiles_misc/;\n']);
aa=sprintf([aa 'addpath ' mydir 'profiles_process_main_v2/;\n']);
aa=sprintf([aa 'addpath ' mydir 'profiles_stats/\n;']);
aa=sprintf([aa 'addpath ' mydir 'profiles_devel/\n;']);
eval(aa);
fid=fopen([mydir 'MITprof_path.m'],'wt'); fprintf(fid,aa); fclose(fid);

        
fprintf('\n\n basic MITprof test: started... \n');

if MITprof_verbose;
fprintf('\nrunning main program on sample data sets\n')
fprintf('========================================\n\n')
end;

%select the data source (and specific params) => wod05 sample
dataset=profiles_prep_select('wod05','90CTD');
%process it
profiles_prep_main(dataset);
%
fprintf(['\n\n wod05 sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);

%select the data source (and specific params) => argo sample
dataset=profiles_prep_select('argo','indian'); 
%process it
profiles_prep_main(dataset);
%
fprintf(['\n\nargo sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);

%select the data source (and specific params) => odv sample
dataset=profiles_prep_select('odv','ODVcompact_sample');
%process it
profiles_prep_main(dataset);
%
fprintf(['\n\nodv sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);

fprintf('\n basic MITprof test: completed. \n');

1
2	global MITprof_verbose; %to print notes to screen
3	if isempty(MITprof_verbose); MITprof_verbose=2; end;
4
5	if MITprof_verbose;
6	fprintf('adding directories to your path\n');
7	fprintf('===============================\n\n')
8	end;
9
10	global mydir; mydir=[pwd '/'];
11	fid=fopen([mydir 'MITprof_path.m'],'wt');
12	aa=sprintf(['global mydir; mydir=''' mydir ''';\n']);
13	aa=sprintf([aa 'addpath ' mydir ';\n']);
14	aa=sprintf([aa 'addpath ' mydir 'profiles_IO_v2/;\n']);
15	aa=sprintf([aa 'addpath ' mydir 'profiles_IO_external/;\n']);
16	aa=sprintf([aa 'addpath ' mydir 'profiles_misc/;\n']);
17	aa=sprintf([aa 'addpath ' mydir 'profiles_process_main_v2/;\n']);
18	aa=sprintf([aa 'addpath ' mydir 'profiles_stats/\n;']);
19	aa=sprintf([aa 'addpath ' mydir 'profiles_devel/\n;']);
20	eval(aa);
21	fid=fopen([mydir 'MITprof_path.m'],'wt'); fprintf(fid,aa); fclose(fid);
22
23
24	fprintf('\n\n basic MITprof test: started... \n');
25
26	if MITprof_verbose;
27	fprintf('\nrunning main program on sample data sets\n')
28	fprintf('========================================\n\n')
29	end;
30
31	%select the data source (and specific params) => wod05 sample
32	dataset=profiles_prep_select('wod05','90CTD');
33	%process it
34	profiles_prep_main(dataset);
35	%
36	fprintf(['\n\n wod05 sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);
37
38	%select the data source (and specific params) => argo sample
39	dataset=profiles_prep_select('argo','indian');
40	%process it
41	profiles_prep_main(dataset);
42	%
43	fprintf(['\n\nargo sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);
44
45	%select the data source (and specific params) => odv sample
46	dataset=profiles_prep_select('odv','ODVcompact_sample');
47	%process it
48	profiles_prep_main(dataset);
49	%
50	fprintf(['\n\nodv sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);
51
52	fprintf('\n basic MITprof test: completed. \n');
53