gael/profilesMatlabProcessing/profiles_process_init.m


global MITprof_verbose; %to print notes to screen
if isempty(MITprof_verbose); MITprof_verbose=2; end;

if MITprof_verbose;
fprintf('adding directories to your path\n');
fprintf('===============================\n\n')
end;

global mydir; mydir=[pwd '/'];
fid=fopen([mydir 'MITprof_path.m'],'wt');
aa=sprintf(['global mydir; mydir=''' mydir ''';\n']);
aa=sprintf([aa 'addpath ' mydir ';\n']);
aa=sprintf([aa 'addpath ' mydir 'profiles_IO_v2/;\n']);
aa=sprintf([aa 'addpath ' mydir 'profiles_IO_external/;\n']);
aa=sprintf([aa 'addpath ' mydir 'profiles_misc/;\n']);
aa=sprintf([aa 'addpath ' mydir 'profiles_process_main_v2/;\n']);
aa=sprintf([aa 'addpath ' mydir 'profiles_stats/\n;']);
aa=sprintf([aa 'addpath ' mydir 'profiles_devel/\n;']);
eval(aa);
fid=fopen([mydir 'MITprof_path.m'],'wt'); fprintf(fid,aa); fclose(fid);

        
fprintf('\n\n basic MITprof test: started... \n');

if MITprof_verbose;
fprintf('\nrunning main program on sample data sets\n')
fprintf('========================================\n\n')
end;

%select the data source (and specific params) => wod05 sample
dataset=profiles_prep_select('wod05','90CTD');
%process it
profiles_prep_main(dataset);
%
fprintf(['\n\n wod05 sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);

%select the data source (and specific params) => argo sample
dataset=profiles_prep_select('argo','indian'); 
%process it
profiles_prep_main(dataset);
%
fprintf(['\n\nargo sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);

%select the data source (and specific params) => odv sample
dataset=profiles_prep_select('odv','ODVcompact_sample');
%process it
profiles_prep_main(dataset);
%
fprintf(['\n\nodv sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);

fprintf('\n basic MITprof test: completed. \n');

1	gforget	1.1
2	gforget	1.4	global MITprof_verbose; %to print notes to screen
3			if isempty(MITprof_verbose); MITprof_verbose=2; end;
4	gforget	1.2
5	gforget	1.4	if MITprof_verbose;
6	gforget	1.1	fprintf('adding directories to your path\n');
7	gforget	1.2	fprintf('===============================\n\n')
8	gforget	1.4	end;
9	gforget	1.1
10	gforget	1.4	global mydir; mydir=[pwd '/'];
11			fid=fopen([mydir 'MITprof_path.m'],'wt');
12			aa=sprintf(['global mydir; mydir=''' mydir ''';\n']);
13			aa=sprintf([aa 'addpath ' mydir ';\n']);
14			aa=sprintf([aa 'addpath ' mydir 'profiles_IO_v2/;\n']);
15			aa=sprintf([aa 'addpath ' mydir 'profiles_IO_external/;\n']);
16			aa=sprintf([aa 'addpath ' mydir 'profiles_misc/;\n']);
17			aa=sprintf([aa 'addpath ' mydir 'profiles_process_main_v2/;\n']);
18	gforget	1.6	aa=sprintf([aa 'addpath ' mydir 'profiles_stats/\n;']);
19	gforget	1.5	aa=sprintf([aa 'addpath ' mydir 'profiles_devel/\n;']);
20	gforget	1.4	eval(aa);
21			fid=fopen([mydir 'MITprof_path.m'],'wt'); fprintf(fid,aa); fclose(fid);
22	gforget	1.1
23	gforget	1.4
24			fprintf('\n\n basic MITprof test: started... \n');
25	gforget	1.1
26	gforget	1.4	if MITprof_verbose;
27			fprintf('\nrunning main program on sample data sets\n')
28	gforget	1.2	fprintf('========================================\n\n')
29	gforget	1.4	end;
30	gforget	1.1
31			%select the data source (and specific params) => wod05 sample
32			dataset=profiles_prep_select('wod05','90CTD');
33			%process it
34	roquet	1.7	profiles_prep_main(dataset);
35	gforget	1.1	%
36	gforget	1.4	fprintf(['\n\n wod05 sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);
37	gforget	1.1
38			%select the data source (and specific params) => argo sample
39			dataset=profiles_prep_select('argo','indian');
40			%process it
41	roquet	1.7	profiles_prep_main(dataset);
42	gforget	1.1	%
43	gforget	1.4	fprintf(['\n\nargo sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);
44	gforget	1.1
45	roquet	1.7	%select the data source (and specific params) => odv sample
46			dataset=profiles_prep_select('odv','ODVcompact_sample');
47			%process it
48			profiles_prep_main(dataset);
49			%
50			fprintf(['\n\nodv sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);
51
52	gforget	1.4	fprintf('\n basic MITprof test: completed. \n');
53	gforget	1.1