gael/profilesMatlabProcessing/profiles_process_init.m

clear all

gcmfaces_global;

if myenv.verbose;
fprintf('creating database directory with reference datasets\n');
fprintf('===============================\n\n')
end;
if ~exist('climatology','dir'), status=mkdir('climatology'); end
gcmfaces_global;
eval(['!ln -s ' myenv.gcmfaces_dir 'sample_input/GRIDv4 climatology/']);
eval(['!ln -s ' myenv.gcmfaces_dir 'sample_input/OCCAetcONv4GRID/* climatology/']);

if myenv.verbose;
fprintf('adding directories to your path\n');
fprintf('===============================\n\n')
end;
MITprof_global;

        
if myenv.verbose;
fprintf('\ngenerating .mat files for reference grid and climatology\n')
fprintf('========================================\n\n')
end;
profiles_prep_load_fields(1);

fprintf('\n\n basic MITprof test: started... \n');

if myenv.verbose;
fprintf('\nrunning main program on sample data sets\n')
fprintf('========================================\n\n')
end;

%select the data source (and specific params) => wod05 sample
dataset=profiles_prep_select('wod05','90CTD');
%process it
profiles_prep_main(dataset);
%
fprintf(['\n\n wod05 sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);

%select the data source (and specific params) => argo sample
dataset=profiles_prep_select('argo','indian'); 
%process it
profiles_prep_main(dataset);
%
fprintf(['\n\nargo sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);

%select the data source (and specific params) => odv sample
dataset=profiles_prep_select('odv','ODVcompact_sample');
%process it
profiles_prep_main(dataset);
%
fprintf(['\n\nodv sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);

fprintf('\n basic MITprof test: completed. \n');

1	roquet	1.8	clear all
2	gforget	1.1
3	gforget	1.15	gcmfaces_global;
4	gforget	1.2
5	gforget	1.15	if myenv.verbose;
6	roquet	1.10	fprintf('creating database directory with reference datasets\n');
7	roquet	1.8	fprintf('===============================\n\n')
8			end;
9	roquet	1.10	if ~exist('climatology','dir'), status=mkdir('climatology'); end
10	gforget	1.12	gcmfaces_global;
11			eval(['!ln -s ' myenv.gcmfaces_dir 'sample_input/GRIDv4 climatology/']);
12			eval(['!ln -s ' myenv.gcmfaces_dir 'sample_input/OCCAetcONv4GRID/* climatology/']);
13	roquet	1.8
14	gforget	1.15	if myenv.verbose;
15	gforget	1.1	fprintf('adding directories to your path\n');
16	gforget	1.2	fprintf('===============================\n\n')
17	gforget	1.4	end;
18	gforget	1.14	MITprof_global;
19	gforget	1.1
20	gforget	1.4
21	gforget	1.15	if myenv.verbose;
22	roquet	1.10	fprintf('\ngenerating .mat files for reference grid and climatology\n')
23			fprintf('========================================\n\n')
24			end;
25			profiles_prep_load_fields(1);
26
27	gforget	1.4	fprintf('\n\n basic MITprof test: started... \n');
28	gforget	1.1
29	gforget	1.15	if myenv.verbose;
30	gforget	1.4	fprintf('\nrunning main program on sample data sets\n')
31	gforget	1.2	fprintf('========================================\n\n')
32	gforget	1.4	end;
33	gforget	1.1
34			%select the data source (and specific params) => wod05 sample
35			dataset=profiles_prep_select('wod05','90CTD');
36			%process it
37	roquet	1.7	profiles_prep_main(dataset);
38	gforget	1.1	%
39	gforget	1.4	fprintf(['\n\n wod05 sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);
40	gforget	1.1
41			%select the data source (and specific params) => argo sample
42			dataset=profiles_prep_select('argo','indian');
43			%process it
44	roquet	1.7	profiles_prep_main(dataset);
45	gforget	1.1	%
46	gforget	1.4	fprintf(['\n\nargo sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);
47	gforget	1.1
48	roquet	1.7	%select the data source (and specific params) => odv sample
49			dataset=profiles_prep_select('odv','ODVcompact_sample');
50			%process it
51			profiles_prep_main(dataset);
52			%
53			fprintf(['\n\nodv sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);
54
55	gforget	1.4	fprintf('\n basic MITprof test: completed. \n');
56	gforget	1.1