gael/profilesMatlabProcessing/profiles_process_init.m

clear all

global MITprof_verbose; %to print notes to screen
if isempty(MITprof_verbose); MITprof_verbose=2; end;

if MITprof_verbose;
fprintf('creating database directory with reference datasets\n');
fprintf('===============================\n\n')
end;
if ~exist('climatology','dir'), status=mkdir('climatology'); end
gcmfaces_global;
eval(['!ln -s ' myenv.gcmfaces_dir 'sample_input/GRIDv4 climatology/']);
eval(['!ln -s ' myenv.gcmfaces_dir 'sample_input/OCCAetcONv4GRID/* climatology/']);

if MITprof_verbose;
fprintf('adding directories to your path\n');
fprintf('===============================\n\n')
end;
MITprof_global;

        
if MITprof_verbose;
fprintf('\ngenerating .mat files for reference grid and climatology\n')
fprintf('========================================\n\n')
end;
profiles_prep_load_fields(1);

fprintf('\n\n basic MITprof test: started... \n');

if MITprof_verbose;
fprintf('\nrunning main program on sample data sets\n')
fprintf('========================================\n\n')
end;

%select the data source (and specific params) => wod05 sample
dataset=profiles_prep_select('wod05','90CTD');
%process it
profiles_prep_main(dataset);
%
fprintf(['\n\n wod05 sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);

%select the data source (and specific params) => argo sample
dataset=profiles_prep_select('argo','indian'); 
%process it
profiles_prep_main(dataset);
%
fprintf(['\n\nargo sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);

%select the data source (and specific params) => odv sample
dataset=profiles_prep_select('odv','ODVcompact_sample');
%process it
profiles_prep_main(dataset);
%
fprintf(['\n\nodv sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);

fprintf('\n basic MITprof test: completed. \n');

1	roquet	1.8	clear all
2	gforget	1.1
3	gforget	1.4	global MITprof_verbose; %to print notes to screen
4			if isempty(MITprof_verbose); MITprof_verbose=2; end;
5	gforget	1.2
6	gforget	1.4	if MITprof_verbose;
7	roquet	1.10	fprintf('creating database directory with reference datasets\n');
8	roquet	1.8	fprintf('===============================\n\n')
9			end;
10	roquet	1.10	if ~exist('climatology','dir'), status=mkdir('climatology'); end
11	gforget	1.12	gcmfaces_global;
12			eval(['!ln -s ' myenv.gcmfaces_dir 'sample_input/GRIDv4 climatology/']);
13			eval(['!ln -s ' myenv.gcmfaces_dir 'sample_input/OCCAetcONv4GRID/* climatology/']);
14	roquet	1.8
15			if MITprof_verbose;
16	gforget	1.1	fprintf('adding directories to your path\n');
17	gforget	1.2	fprintf('===============================\n\n')
18	gforget	1.4	end;
19	gforget	1.14	MITprof_global;
20	gforget	1.1
21	gforget	1.4
22	roquet	1.10	if MITprof_verbose;
23			fprintf('\ngenerating .mat files for reference grid and climatology\n')
24			fprintf('========================================\n\n')
25			end;
26			profiles_prep_load_fields(1);
27
28	gforget	1.4	fprintf('\n\n basic MITprof test: started... \n');
29	gforget	1.1
30	gforget	1.4	if MITprof_verbose;
31			fprintf('\nrunning main program on sample data sets\n')
32	gforget	1.2	fprintf('========================================\n\n')
33	gforget	1.4	end;
34	gforget	1.1
35			%select the data source (and specific params) => wod05 sample
36			dataset=profiles_prep_select('wod05','90CTD');
37			%process it
38	roquet	1.7	profiles_prep_main(dataset);
39	gforget	1.1	%
40	gforget	1.4	fprintf(['\n\n wod05 sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);
41	gforget	1.1
42			%select the data source (and specific params) => argo sample
43			dataset=profiles_prep_select('argo','indian');
44			%process it
45	roquet	1.7	profiles_prep_main(dataset);
46	gforget	1.1	%
47	gforget	1.4	fprintf(['\n\nargo sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);
48	gforget	1.1
49	roquet	1.7	%select the data source (and specific params) => odv sample
50			dataset=profiles_prep_select('odv','ODVcompact_sample');
51			%process it
52			profiles_prep_main(dataset);
53			%
54			fprintf(['\n\nodv sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']);
55
56	gforget	1.4	fprintf('\n basic MITprof test: completed. \n');
57	gforget	1.1