| 1 |
roquet |
1.8 |
clear all |
| 2 |
gforget |
1.1 |
|
| 3 |
gforget |
1.4 |
global MITprof_verbose; %to print notes to screen |
| 4 |
|
|
if isempty(MITprof_verbose); MITprof_verbose=2; end; |
| 5 |
gforget |
1.2 |
|
| 6 |
gforget |
1.4 |
if MITprof_verbose; |
| 7 |
roquet |
1.10 |
fprintf('creating database directory with reference datasets\n'); |
| 8 |
roquet |
1.8 |
fprintf('===============================\n\n') |
| 9 |
|
|
end; |
| 10 |
roquet |
1.10 |
if ~exist('climatology','dir'), status=mkdir('climatology'); end |
| 11 |
gforget |
1.12 |
gcmfaces_global; |
| 12 |
|
|
eval(['!ln -s ' myenv.gcmfaces_dir 'sample_input/GRIDv4 climatology/']); |
| 13 |
|
|
eval(['!ln -s ' myenv.gcmfaces_dir 'sample_input/OCCAetcONv4GRID/* climatology/']); |
| 14 |
roquet |
1.8 |
|
| 15 |
|
|
if MITprof_verbose; |
| 16 |
gforget |
1.1 |
fprintf('adding directories to your path\n'); |
| 17 |
gforget |
1.2 |
fprintf('===============================\n\n') |
| 18 |
gforget |
1.4 |
end; |
| 19 |
gforget |
1.1 |
|
| 20 |
gforget |
1.11 |
global MITprof_dir; MITprof_dir=[pwd '/']; |
| 21 |
|
|
fid=fopen([MITprof_dir 'MITprof_path.m'],'wt'); |
| 22 |
|
|
aa=sprintf(['global MITprof_dir; MITprof_dir=''' MITprof_dir ''';\n']); |
| 23 |
|
|
aa=sprintf([aa 'addpath ' MITprof_dir ';\n']); |
| 24 |
|
|
aa=sprintf([aa 'addpath ' MITprof_dir 'profiles_IO_v2/;\n']); |
| 25 |
|
|
aa=sprintf([aa 'addpath ' MITprof_dir 'profiles_IO_external/;\n']); |
| 26 |
|
|
aa=sprintf([aa 'addpath ' MITprof_dir 'profiles_misc/;\n']); |
| 27 |
|
|
aa=sprintf([aa 'addpath ' MITprof_dir 'profiles_process_main_v2/;\n']); |
| 28 |
|
|
aa=sprintf([aa 'addpath ' MITprof_dir 'profiles_stats/;\n']); |
| 29 |
gforget |
1.13 |
aa=sprintf([aa 'addpath ' MITprof_dir 'ecco_v4/;\n']); |
| 30 |
gforget |
1.11 |
aa=sprintf([aa 'addpath ' MITprof_dir 'profiles_devel/;\n']); |
| 31 |
|
|
aa=sprintf([aa 'addpath ' MITprof_dir 'climatology/;\n']); |
| 32 |
gforget |
1.4 |
eval(aa); |
| 33 |
gforget |
1.11 |
fid=fopen([MITprof_dir 'MITprof_path.m'],'wt'); fprintf(fid,aa); fclose(fid); |
| 34 |
gforget |
1.1 |
|
| 35 |
gforget |
1.4 |
|
| 36 |
roquet |
1.10 |
if MITprof_verbose; |
| 37 |
|
|
fprintf('\ngenerating .mat files for reference grid and climatology\n') |
| 38 |
|
|
fprintf('========================================\n\n') |
| 39 |
|
|
end; |
| 40 |
|
|
profiles_prep_load_fields(1); |
| 41 |
|
|
|
| 42 |
gforget |
1.4 |
fprintf('\n\n basic MITprof test: started... \n'); |
| 43 |
gforget |
1.1 |
|
| 44 |
gforget |
1.4 |
if MITprof_verbose; |
| 45 |
|
|
fprintf('\nrunning main program on sample data sets\n') |
| 46 |
gforget |
1.2 |
fprintf('========================================\n\n') |
| 47 |
gforget |
1.4 |
end; |
| 48 |
gforget |
1.1 |
|
| 49 |
|
|
%select the data source (and specific params) => wod05 sample |
| 50 |
|
|
dataset=profiles_prep_select('wod05','90CTD'); |
| 51 |
|
|
%process it |
| 52 |
roquet |
1.7 |
profiles_prep_main(dataset); |
| 53 |
gforget |
1.1 |
% |
| 54 |
gforget |
1.4 |
fprintf(['\n\n wod05 sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']); |
| 55 |
gforget |
1.1 |
|
| 56 |
|
|
%select the data source (and specific params) => argo sample |
| 57 |
|
|
dataset=profiles_prep_select('argo','indian'); |
| 58 |
|
|
%process it |
| 59 |
roquet |
1.7 |
profiles_prep_main(dataset); |
| 60 |
gforget |
1.1 |
% |
| 61 |
gforget |
1.4 |
fprintf(['\n\nargo sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']); |
| 62 |
gforget |
1.1 |
|
| 63 |
roquet |
1.7 |
%select the data source (and specific params) => odv sample |
| 64 |
|
|
dataset=profiles_prep_select('odv','ODVcompact_sample'); |
| 65 |
|
|
%process it |
| 66 |
|
|
profiles_prep_main(dataset); |
| 67 |
|
|
% |
| 68 |
|
|
fprintf(['\n\nodv sample -- done -- ' dataset.dirOut dataset.fileOut '.nc was created \n\n']); |
| 69 |
|
|
|
| 70 |
gforget |
1.4 |
fprintf('\n basic MITprof test: completed. \n'); |
| 71 |
gforget |
1.1 |
|
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