/[MITgcm]/MITgcm_contrib/gael/profilesMatlabProcessing/ecco_v4/insitu_diags.m
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revision 1.1 by gforget, Fri Jul 1 18:03:43 2011 UTC revision 1.2 by gforget, Wed Apr 18 20:24:45 2012 UTC
# Line 1  Line 1 
1  function []=insitu_diags(dirModel,doComp,varargin);  function []=insitu_diags(dirModel,dirMat,doComp,dirTex);
2  %object:        driver for insitu_misfit and insitu_cost  %object:     driver for insitu_misfit and insitu_cost
3  %inputs:        dirModel is the model run directory      %inputs:     dirModel is the model run directory    
4  %               doComp states whether to compute (1) or display (0)  %            dirMat is the directory where diagnozed .mat files will be saved
5    %                     -> set it to '' to use the default [dirModel 'mat/']
6    %            doComp states whether to compute (1) or display (0)
7    %            dirTex is the directory where tex and fig files will be created
8    
9  if nargin==3; addToTex={'addToTex',varargin{1}}; else; addToTex={'addToTex',0}; end;  if dirMat(1)~='/'; dirMat=[pwd '/' dirMat]; end; %make full path
10    subdirMat={'subdirMat',[dirMat '/']};
11    
12    subdirData={'subdirData',[dirMat '/profiles/output/']};
13    
14    if isempty(who('dirTex'));
15      addToTex={'addToTex',0}; subdirTex={'subdirTex',''};
16    else;
17      if ~ischar(dirTex); error('mis-specified dirTex'); end;
18      if dirTex(1)~='/'; dirTex=[pwd '/' dirTex]; end; %make full path
19      addToTex={'addToTex',1}; subdirTex={'subdirTex',[dirTex '/']};
20    end;
21    
22  if doComp;  if doComp;
23  insitu_misfit(dirModel,1);  insitu_misfit('',1,subdirData,subdirMat);
24  insitu_cost(dirModel,1);  insitu_cost('',1,subdirData,subdirMat);
25  else;  else;
26  insitu_misfit(dirModel,0,addToTex);  insitu_misfit('',0,subdirData,subdirMat,addToTex,subdirTex);
27  insitu_cost(dirModel,0,addToTex);  insitu_cost('',0,subdirData,subdirMat,addToTex,subdirTex);
28  end;  end;
29    
30  return  return
31    %old example that may or may not work ...
32    
33  dirModel='./apr1alpha_it0/';  dirModel='./apr1alpha_it0/';
34  listData={'listData','WOD09_XBT*'};  listData={'listData','WOD09_XBT*'};
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