1 |
gforget |
1.1 |
function []=diags_driver_tex(dirMat,setDiags,dirTex,nameTex); |
2 |
gforget |
1.17 |
% DIAGS_DRIVER_TEX(dirMat,setDiags,dirTex,nameTex) |
3 |
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% |
4 |
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% displays multiple sets of diagnostics (setDiags={'profiles', |
5 |
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% 'cost','A','B','C','MLD','D'} by default) from the results |
6 |
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% stored in dirMat and outputs the plots to tex |
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% ([dirTex nameTex '.tex'] and [dirTex nameTex '*.eps']) |
8 |
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% |
9 |
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% setDiags is the choice of diagnostics (cell) that may include |
10 |
gforget |
1.1 |
% 'profiles') model to insitu data comparison |
11 |
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% 'cost') ssh etc. cost functions |
12 |
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% 'A') trasnports |
13 |
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% 'B') air-sea fluxes |
14 |
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% 'C') state variables |
15 |
gforget |
1.17 |
% 'D') global and hemispheric budgets |
16 |
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% 'MLD') mixed layer depths |
17 |
gforget |
1.5 |
% 'SEAICE') seaice fields |
18 |
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% 'controls') control vector adjustments |
19 |
gforget |
1.1 |
|
20 |
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
21 |
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%determine input/output params: |
22 |
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
23 |
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24 |
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%directory names: |
25 |
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if iscell(dirMat); dirMatRef=dirMat{2}; dirMat=dirMat{1}; end; |
26 |
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dirMat=[dirMat '/']; |
27 |
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if isempty(who('dirMatRef')); dirMatRef=''; |
28 |
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elseif ~isempty(dirMatRef); dirMatRef=[dirMatRef '/']; |
29 |
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end; |
30 |
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if isempty(who('dirTex')); dirTex=''; else; dirTex=[dirTex '/']; end; |
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if isempty(who('nameTex')); nameTex='myPlots'; end; |
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|
33 |
gforget |
1.10 |
%set default setDiags and myTitle |
34 |
gforget |
1.1 |
if isempty(setDiags); |
35 |
gforget |
1.14 |
setDiags={'profiles','cost','A','B','C','MLD','D'}; |
36 |
gforget |
1.5 |
if strcmp(nameTex,'myPlots'); nameTex='standardAnalysis'; end; |
37 |
gforget |
1.10 |
% |
38 |
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tmp1=dirMat; tmp2=strfind(tmp1,'_'); tmp1(tmp2)=' '; |
39 |
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myTitle={'gcmfaces','standard analysis of the solution in',tmp1}; |
40 |
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else; |
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tmp1=dirMat; tmp2=strfind(tmp1,'_'); tmp1(tmp2)=' '; |
42 |
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myTitle={'gcmfaces analysis of the solution in',tmp1}; |
43 |
gforget |
1.1 |
end; |
44 |
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45 |
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%set fileTex and create dirTex if needed |
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if isempty(dirTex); error('dirTex must be specified'); end; |
47 |
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fileTex=[dirTex nameTex '.tex']; |
48 |
gforget |
1.11 |
if isempty(dir(dirTex)); mkdir(dirTex); end; |
49 |
gforget |
1.1 |
|
50 |
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%%%%%%%%%%%%%%%%%%%%%% |
51 |
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%load grid and params: |
52 |
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%%%%%%%%%%%%%%%%%%%%%% |
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54 |
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gcmfaces_global; global myparms; |
55 |
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test1=~isempty(dir([dirMat 'basic_diags_ecco_mygrid.mat'])); |
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test2=~isempty(dir([dirMat 'diags_grid_parms.mat'])); |
57 |
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if ~test1&~test2; |
58 |
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error('missing diags_grid_parms.mat') |
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elseif test2; |
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nameGrid='diags_grid_parms.mat'; |
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suffDiag='diags_set_'; |
62 |
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budgetList='diags_select_budget_list.mat'; |
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else; |
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nameGrid='basic_diags_ecco_mygrid.mat'; |
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suffDiag='basic_diags_ecco_'; |
66 |
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budgetList='basic_diags_ecco_budget_list.mat'; |
67 |
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end; |
68 |
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|
69 |
gforget |
1.20 |
%reload myparms from dirMat (and mygrid if included the mat file) |
70 |
gforget |
1.1 |
eval(['load ' dirMat nameGrid ';']); |
71 |
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|
72 |
gforget |
1.20 |
%reload mygrid if needed |
73 |
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if isfield(myparms,'dirGrid'); diags_grid(myparms.dirGrid,0); end; |
74 |
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|
75 |
gforget |
1.1 |
%in case mygrid.memoryLimit=1, load the stuff that was not saved to diags_grid_parms.mat |
76 |
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if mygrid.memoryLimit==1; |
77 |
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list0={'hFacS','hFacW'}; |
78 |
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for iFld=1:length(list0); |
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eval(['mygrid.' list0{iFld} '=rdmds2gcmfaces([mygrid.dirGrid ''' list0{iFld} '*'']);']); |
80 |
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end; |
81 |
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% |
82 |
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mygrid.hFacCsurf=mygrid.hFacC; |
83 |
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for ff=1:mygrid.hFacC.nFaces; mygrid.hFacCsurf{ff}=mygrid.hFacC{ff}(:,:,1); end; |
84 |
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% |
85 |
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mskC=mygrid.hFacC; mskC(mskC==0)=NaN; mskC(mskC>0)=1; mygrid.mskC=mskC; |
86 |
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mskW=mygrid.hFacW; mskW(mskW==0)=NaN; mskW(mskW>0)=1; mygrid.mskW=mskW; |
87 |
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mskS=mygrid.hFacS; mskS(mskS==0)=NaN; mskS(mskS>0)=1; mygrid.mskS=mskS; |
88 |
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% |
89 |
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gcmfaces_lines_zonal; |
90 |
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mygrid.LATS=[mygrid.LATS_MASKS.lat]'; |
91 |
gforget |
1.16 |
[lonPairs,latPairs,names]=gcmfaces_lines_pairs; |
92 |
gforget |
1.1 |
gcmfaces_lines_transp(lonPairs,latPairs,names); |
93 |
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end; |
94 |
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95 |
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96 |
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
97 |
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%finalize listDiags |
98 |
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
99 |
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100 |
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%determined where to display anomalies between runs |
101 |
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doAnomalies=~isempty(dirMatRef); |
102 |
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103 |
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%check if result is here to plot |
104 |
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doBudget=~isempty(dir([dirMat suffDiag 'D_*'])); |
105 |
gforget |
1.4 |
doBudget=~isempty(dir([dirMat suffDiag 'D_*']))|... |
106 |
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~isempty(dir([dirMat 'diags_set_D/' suffDiag 'D_*'])); |
107 |
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doProfiles=~isempty(dir([dirMat 'insitu_cost_all.mat']))|... |
108 |
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~isempty(dir([dirMat 'cost/insitu_cost_all.mat'])); |
109 |
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doCost=~isempty(dir([dirMat 'cost_altimeter_obs.mat']))|... |
110 |
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~isempty(dir([dirMat 'cost/cost_altimeter_obs.mat'])); |
111 |
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doCtrl=~isempty(dir([dirMat 'cost_xx_aqh.mat']))|... |
112 |
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~isempty(dir([dirMat 'cost/cost_xx_aqh.mat'])); |
113 |
gforget |
1.1 |
|
114 |
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%the following have no code for diff between runs |
115 |
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if doAnomalies; |
116 |
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doProfiles=0; |
117 |
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doCost=0; |
118 |
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doCtrl=0; |
119 |
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end; |
120 |
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121 |
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%reduce setDiags if needed: |
122 |
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doDiags=ones(1,length(setDiags)); |
123 |
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% |
124 |
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for ii=1:length(setDiags); |
125 |
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if iscell(setDiags{ii}); |
126 |
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if ~doBudget&strcmp(setDiags{ii}{1},'D'); doDiags(ii)=0; end; |
127 |
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elseif ~doBudget&strcmp(setDiags{ii},'D'); doDiags(ii)=0; |
128 |
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elseif ~doProfiles&strcmp(setDiags{ii},'profiles'); doDiags(ii)=0; |
129 |
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elseif ~doCost&strcmp(setDiags{ii},'cost'); doDiags(ii)=0; |
130 |
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elseif ~doCtrl&strcmp(setDiags{ii},'controls'); doDiags(ii)=0; |
131 |
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end; |
132 |
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end; |
133 |
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% |
134 |
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setDiags={setDiags{find(doDiags)}}; |
135 |
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136 |
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
137 |
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%initialize tex file |
138 |
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
139 |
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140 |
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if ~isempty(dirMatRef); |
141 |
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tmp1=dirMat; tmp2=strfind(tmp1,'_'); tmp1(tmp2)=' '; |
142 |
gforget |
1.10 |
myTitle={'gcmfaces analysis of the solution in',tmp1}; |
143 |
gforget |
1.1 |
tmp1=dirMatRef; tmp2=strfind(tmp1,'_'); tmp1(tmp2)=' '; |
144 |
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myTitle={myTitle{:},' minus ',tmp1}; |
145 |
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end; |
146 |
gforget |
1.10 |
|
147 |
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if isempty(dirMatRef)&~isempty(dir([dirMat '../README'])); |
148 |
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[rdm]=read_readme([dirMat '../README']); |
149 |
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else; |
150 |
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rdm=[]; |
151 |
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end; |
152 |
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153 |
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write2tex(fileTex,0,myTitle,rdm); |
154 |
gforget |
1.1 |
|
155 |
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
156 |
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%augment tex file |
157 |
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
158 |
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159 |
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for ii=1:length(setDiags); |
160 |
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161 |
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if iscell(setDiags{ii}); |
162 |
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ttl=input('specify tex file section title:\n'); |
163 |
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write2tex(fileTex,1,ttl,1); |
164 |
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diags_display({dirMat,dirMatRef},setDiags{ii},dirTex,nameTex); |
165 |
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166 |
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elseif strcmp(setDiags{ii},'profiles'); |
167 |
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%in situ profiles fit |
168 |
gforget |
1.5 |
write2tex(fileTex,1,'fit to data',1); |
169 |
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write2tex(fileTex,1,'fit to in situ data',2); |
170 |
gforget |
1.2 |
insitu_diags(dirMat,0,dirTex,nameTex); |
171 |
gforget |
1.1 |
|
172 |
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elseif strcmp(setDiags{ii},'cost'); |
173 |
gforget |
1.9 |
if isempty(find(strcmp(setDiags,'profiles'))); |
174 |
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write2tex(fileTex,1,'fit to data',1); |
175 |
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end; |
176 |
gforget |
1.19 |
%altimeter fit |
177 |
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if ~isempty(dir([dirMat 'cost/cost_altimeter_mod.mat'])) |
178 |
gforget |
1.9 |
write2tex(fileTex,1,'fit to altimeter data (RADS)',2); |
179 |
gforget |
1.14 |
cost_altimeter_disp(dirMat,0,'etaglo',dirTex,nameTex); |
180 |
gforget |
1.2 |
cost_altimeter_disp(dirMat,2,'modMobs',dirTex,nameTex); |
181 |
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cost_altimeter_disp(dirMat,1,'modMobs',dirTex,nameTex); |
182 |
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cost_altimeter_disp(dirMat,3,'modMobs',dirTex,nameTex); |
183 |
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cost_altimeter_disp(dirMat,1,'obs',dirTex,nameTex); |
184 |
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cost_altimeter_disp(dirMat,1,'mod',dirTex,nameTex); |
185 |
gforget |
1.19 |
end; |
186 |
gforget |
1.1 |
%other cost terms |
187 |
gforget |
1.5 |
write2tex(fileTex,1,'fit to sst data',2); |
188 |
gforget |
1.2 |
cost_sst('',dirMat,0,dirTex,nameTex); |
189 |
gforget |
1.9 |
write2tex(fileTex,1,'fit to seaice data',2); |
190 |
gforget |
1.3 |
cost_seaicearea('',dirMat,0,dirTex,nameTex); |
191 |
gforget |
1.1 |
|
192 |
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elseif strcmp(setDiags{ii},'A'); |
193 |
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write2tex(fileTex,1,'volume, heat and salt transports',1); |
194 |
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diags_display({dirMat,dirMatRef},'A',dirTex,nameTex); |
195 |
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196 |
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elseif strcmp(setDiags{ii},'B'); |
197 |
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write2tex(fileTex,1,'mean and variance maps',1); |
198 |
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diags_display({dirMat,dirMatRef},'B',dirTex,nameTex); |
199 |
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200 |
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elseif strcmp(setDiags{ii},'C'); |
201 |
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write2tex(fileTex,1,'global, zonal, regional averages',1); |
202 |
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diags_display({dirMat,dirMatRef},'C',dirTex,nameTex); |
203 |
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204 |
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elseif strcmp(setDiags{ii},'D'); |
205 |
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budget_list=1; |
206 |
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if ~isempty(dir([dirMat budgetList])); |
207 |
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eval(['load ' dirMat budgetList ';']); |
208 |
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end; |
209 |
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for kk=budget_list; |
210 |
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if kk==1; |
211 |
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tmp1='(top to bottom)'; |
212 |
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else; |
213 |
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tmp1=sprintf('(%im to bottom)',round(-mygrid.RF(kk))); |
214 |
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end; |
215 |
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write2tex(fileTex,1,['budgets : volume, heat and salt ' tmp1],1); |
216 |
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diags_display({dirMat,dirMatRef},{'D',kk},dirTex,nameTex); |
217 |
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end; |
218 |
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|
219 |
gforget |
1.5 |
elseif strcmp(setDiags{ii},'MLD'); |
220 |
gforget |
1.6 |
write2tex(fileTex,1,'mixed layer depth fields',1); |
221 |
gforget |
1.5 |
diags_display({dirMat,dirMatRef},'MLD',dirTex,nameTex); |
222 |
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elseif strcmp(setDiags{ii},'SEAICE'); |
223 |
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write2tex(fileTex,1,'seaice and snow fields',1); |
224 |
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diags_display({dirMat,dirMatRef},'SEAICE',dirTex,nameTex); |
225 |
gforget |
1.1 |
elseif strcmp(setDiags{ii},'controls'); |
226 |
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%controls |
227 |
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write2tex(fileTex,1,'controls',1); |
228 |
gforget |
1.2 |
cost_xx('',dirMat,0,dirTex,nameTex); |
229 |
gforget |
1.1 |
|
230 |
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else; |
231 |
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ttl=input('specify tex file section title:\n'); |
232 |
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write2tex(fileTex,1,ttl,1); |
233 |
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diags_display({dirMat,dirMatRef},setDiags{ii},dirTex,nameTex); |
234 |
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235 |
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end;%if iscell(setDiags{ii}); |
236 |
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end;%for ii=1:length(setDiags); |
237 |
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238 |
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
239 |
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%finalize tex file |
240 |
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
241 |
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242 |
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write2tex(fileTex,4); |
243 |
gforget |
1.15 |
%if isunix; |
244 |
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%write2tex(fileTex,5); |
245 |
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%else; |
246 |
gforget |
1.18 |
%fprintf(['\nUsers of pc or mac computers are left to compile the tex file :\n' fileTex '\noutside of matlab \n \n']); |
247 |
gforget |
1.15 |
%end; |
248 |
gforget |
1.18 |
fprintf(['\n Tex file is ready to be compiled :\n ' fileTex '\n']); |
249 |
gforget |
1.1 |
|
250 |
gforget |
1.10 |
%%%%% get README text information |
251 |
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252 |
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function [rdm]=read_readme(filReadme); |
253 |
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254 |
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gcmfaces_global; |
255 |
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256 |
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rdm=[]; |
257 |
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258 |
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fid=fopen(filReadme,'rt'); |
259 |
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while ~feof(fid); |
260 |
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nn=length(rdm); |
261 |
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rdm{nn+1} = fgetl(fid); |
262 |
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end; |
263 |
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fclose(fid); |
264 |
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265 |
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