| 1 |
gforget |
1.1 |
function []=diags_driver_tex(dirMat,setDiags,dirTex,nameTex); |
| 2 |
|
|
%object: build tex file from a set of diagnostics |
| 3 |
|
|
%input: dirMat is the directory where diagnozed .mat files are. |
| 4 |
|
|
% dirMat is usually specified as a chararcter string, but |
| 5 |
|
|
% user can also specify dirMat as {dirMat,dirMatRef} |
| 6 |
|
|
% in order to plot the dirMat-dirMatRef anlomalies. |
| 7 |
|
|
% setDiags is the choice of diagnostics set. The default |
| 8 |
|
|
% is {'profiles','cost','A','B','C','D','controls'} where |
| 9 |
|
|
% 'profiles') model to insitu data comparison |
| 10 |
|
|
% 'cost') ssh etc. cost functions |
| 11 |
|
|
% 'A') trasnports |
| 12 |
|
|
% 'B') air-sea fluxes |
| 13 |
|
|
% 'C') state variables |
| 14 |
|
|
% 'D') global and regional budgets |
| 15 |
|
|
% 'controls') estimated control vector |
| 16 |
|
|
% dirTex is the directory where tex and figures files are created |
| 17 |
|
|
% nameTex is the tex file name (default : 'myPlots') |
| 18 |
|
|
%note: e.g. to plot just the budgets setDiags={'D'}, and |
| 19 |
|
|
% to plot just the subsurface budgets setDiags={{'D',11}} |
| 20 |
|
|
|
| 21 |
|
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 22 |
|
|
%determine input/output params: |
| 23 |
|
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 24 |
|
|
|
| 25 |
|
|
%directory names: |
| 26 |
|
|
if iscell(dirMat); dirMatRef=dirMat{2}; dirMat=dirMat{1}; end; |
| 27 |
|
|
dirMat=[dirMat '/']; |
| 28 |
|
|
if isempty(who('dirMatRef')); dirMatRef=''; |
| 29 |
|
|
elseif ~isempty(dirMatRef); dirMatRef=[dirMatRef '/']; |
| 30 |
|
|
end; |
| 31 |
|
|
if isempty(who('dirTex')); dirTex=''; else; dirTex=[dirTex '/']; end; |
| 32 |
|
|
if isempty(who('nameTex')); nameTex='myPlots'; end; |
| 33 |
|
|
|
| 34 |
|
|
%set default setDiags |
| 35 |
|
|
if isempty(setDiags); |
| 36 |
|
|
setDiags={'profiles','cost','A','B','C','D','controls'}; |
| 37 |
|
|
end; |
| 38 |
|
|
|
| 39 |
|
|
%set fileTex and create dirTex if needed |
| 40 |
|
|
if isempty(dirTex); error('dirTex must be specified'); end; |
| 41 |
|
|
fileTex=[dirTex nameTex '.tex']; |
| 42 |
|
|
if isempty(dir(dirTex)); eval(['!mkdir ' dirTex ';']); end; |
| 43 |
|
|
|
| 44 |
|
|
%%%%%%%%%%%%%%%%%%%%%% |
| 45 |
|
|
%load grid and params: |
| 46 |
|
|
%%%%%%%%%%%%%%%%%%%%%% |
| 47 |
|
|
|
| 48 |
|
|
gcmfaces_global; global myparms; |
| 49 |
|
|
test1=~isempty(dir([dirMat 'basic_diags_ecco_mygrid.mat'])); |
| 50 |
|
|
test2=~isempty(dir([dirMat 'diags_grid_parms.mat'])); |
| 51 |
|
|
if ~test1&~test2; |
| 52 |
|
|
error('missing diags_grid_parms.mat') |
| 53 |
|
|
elseif test2; |
| 54 |
|
|
nameGrid='diags_grid_parms.mat'; |
| 55 |
|
|
suffDiag='diags_set_'; |
| 56 |
|
|
budgetList='diags_select_budget_list.mat'; |
| 57 |
|
|
else; |
| 58 |
|
|
nameGrid='basic_diags_ecco_mygrid.mat'; |
| 59 |
|
|
suffDiag='basic_diags_ecco_'; |
| 60 |
|
|
budgetList='basic_diags_ecco_budget_list.mat'; |
| 61 |
|
|
end; |
| 62 |
|
|
|
| 63 |
|
|
%here we always reload the grid from dirMat to make sure the same one is used throughout |
| 64 |
|
|
eval(['load ' dirMat nameGrid ';']); |
| 65 |
|
|
|
| 66 |
|
|
%in case mygrid.memoryLimit=1, load the stuff that was not saved to diags_grid_parms.mat |
| 67 |
|
|
if mygrid.memoryLimit==1; |
| 68 |
|
|
list0={'hFacS','hFacW'}; |
| 69 |
|
|
for iFld=1:length(list0); |
| 70 |
|
|
eval(['mygrid.' list0{iFld} '=rdmds2gcmfaces([mygrid.dirGrid ''' list0{iFld} '*'']);']); |
| 71 |
|
|
end; |
| 72 |
|
|
% |
| 73 |
|
|
mygrid.hFacCsurf=mygrid.hFacC; |
| 74 |
|
|
for ff=1:mygrid.hFacC.nFaces; mygrid.hFacCsurf{ff}=mygrid.hFacC{ff}(:,:,1); end; |
| 75 |
|
|
% |
| 76 |
|
|
mskC=mygrid.hFacC; mskC(mskC==0)=NaN; mskC(mskC>0)=1; mygrid.mskC=mskC; |
| 77 |
|
|
mskW=mygrid.hFacW; mskW(mskW==0)=NaN; mskW(mskW>0)=1; mygrid.mskW=mskW; |
| 78 |
|
|
mskS=mygrid.hFacS; mskS(mskS==0)=NaN; mskS(mskS>0)=1; mygrid.mskS=mskS; |
| 79 |
|
|
% |
| 80 |
|
|
gcmfaces_lines_zonal; |
| 81 |
|
|
mygrid.LATS=[mygrid.LATS_MASKS.lat]'; |
| 82 |
|
|
[lonPairs,latPairs,names]=line_greatC_TUV_MASKS_v4; |
| 83 |
|
|
gcmfaces_lines_transp(lonPairs,latPairs,names); |
| 84 |
|
|
end; |
| 85 |
|
|
|
| 86 |
|
|
|
| 87 |
|
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 88 |
|
|
%finalize listDiags |
| 89 |
|
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 90 |
|
|
|
| 91 |
|
|
%determined where to display anomalies between runs |
| 92 |
|
|
doAnomalies=~isempty(dirMatRef); |
| 93 |
|
|
|
| 94 |
|
|
%check if result is here to plot |
| 95 |
|
|
doBudget=~isempty(dir([dirMat suffDiag 'D_*'])); |
| 96 |
gforget |
1.4 |
doBudget=~isempty(dir([dirMat suffDiag 'D_*']))|... |
| 97 |
|
|
~isempty(dir([dirMat 'diags_set_D/' suffDiag 'D_*'])); |
| 98 |
|
|
doProfiles=~isempty(dir([dirMat 'insitu_cost_all.mat']))|... |
| 99 |
|
|
~isempty(dir([dirMat 'cost/insitu_cost_all.mat'])); |
| 100 |
|
|
doCost=~isempty(dir([dirMat 'cost_altimeter_obs.mat']))|... |
| 101 |
|
|
~isempty(dir([dirMat 'cost/cost_altimeter_obs.mat'])); |
| 102 |
|
|
doCtrl=~isempty(dir([dirMat 'cost_xx_aqh.mat']))|... |
| 103 |
|
|
~isempty(dir([dirMat 'cost/cost_xx_aqh.mat'])); |
| 104 |
gforget |
1.1 |
|
| 105 |
|
|
%the following have no code for diff between runs |
| 106 |
|
|
if doAnomalies; |
| 107 |
|
|
doProfiles=0; |
| 108 |
|
|
doCost=0; |
| 109 |
|
|
doCtrl=0; |
| 110 |
|
|
end; |
| 111 |
|
|
|
| 112 |
|
|
%reduce setDiags if needed: |
| 113 |
|
|
doDiags=ones(1,length(setDiags)); |
| 114 |
|
|
% |
| 115 |
|
|
for ii=1:length(setDiags); |
| 116 |
|
|
if iscell(setDiags{ii}); |
| 117 |
|
|
if ~doBudget&strcmp(setDiags{ii}{1},'D'); doDiags(ii)=0; end; |
| 118 |
|
|
elseif ~doBudget&strcmp(setDiags{ii},'D'); doDiags(ii)=0; |
| 119 |
|
|
elseif ~doProfiles&strcmp(setDiags{ii},'profiles'); doDiags(ii)=0; |
| 120 |
|
|
elseif ~doCost&strcmp(setDiags{ii},'cost'); doDiags(ii)=0; |
| 121 |
|
|
elseif ~doCtrl&strcmp(setDiags{ii},'controls'); doDiags(ii)=0; |
| 122 |
|
|
end; |
| 123 |
|
|
end; |
| 124 |
|
|
% |
| 125 |
|
|
setDiags={setDiags{find(doDiags)}}; |
| 126 |
|
|
|
| 127 |
|
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 128 |
|
|
%initialize tex file |
| 129 |
|
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 130 |
|
|
|
| 131 |
|
|
tmp1=dirMat; tmp2=strfind(tmp1,'_'); tmp1(tmp2)=' '; |
| 132 |
|
|
myTitle={'my standard analysis of the solution in',tmp1}; |
| 133 |
|
|
if ~isempty(dirMatRef); |
| 134 |
|
|
tmp1=dirMat; tmp2=strfind(tmp1,'_'); tmp1(tmp2)=' '; |
| 135 |
|
|
myTitle={'my standard analysis of the solution in',tmp1}; |
| 136 |
|
|
tmp1=dirMatRef; tmp2=strfind(tmp1,'_'); tmp1(tmp2)=' '; |
| 137 |
|
|
myTitle={myTitle{:},' minus ',tmp1}; |
| 138 |
|
|
end; |
| 139 |
|
|
write2tex(fileTex,0,myTitle); |
| 140 |
|
|
|
| 141 |
|
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 142 |
|
|
%augment tex file |
| 143 |
|
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 144 |
|
|
|
| 145 |
|
|
for ii=1:length(setDiags); |
| 146 |
|
|
|
| 147 |
|
|
if iscell(setDiags{ii}); |
| 148 |
|
|
ttl=input('specify tex file section title:\n'); |
| 149 |
|
|
write2tex(fileTex,1,ttl,1); |
| 150 |
|
|
diags_display({dirMat,dirMatRef},setDiags{ii},dirTex,nameTex); |
| 151 |
|
|
|
| 152 |
|
|
elseif strcmp(setDiags{ii},'profiles'); |
| 153 |
|
|
%in situ profiles fit |
| 154 |
|
|
write2tex(fileTex,1,'fit to in situ data',1); |
| 155 |
gforget |
1.2 |
insitu_diags(dirMat,0,dirTex,nameTex); |
| 156 |
gforget |
1.1 |
|
| 157 |
|
|
elseif strcmp(setDiags{ii},'cost'); |
| 158 |
|
|
%altimeter fit |
| 159 |
|
|
write2tex(fileTex,1,'fit to altimeter data',1); |
| 160 |
gforget |
1.2 |
cost_altimeter_disp(dirMat,2,'modMobs',dirTex,nameTex); |
| 161 |
|
|
cost_altimeter_disp(dirMat,1,'modMobs',dirTex,nameTex); |
| 162 |
|
|
cost_altimeter_disp(dirMat,3,'modMobs',dirTex,nameTex); |
| 163 |
|
|
cost_altimeter_disp(dirMat,1,'obs',dirTex,nameTex); |
| 164 |
|
|
cost_altimeter_disp(dirMat,1,'mod',dirTex,nameTex); |
| 165 |
gforget |
1.1 |
|
| 166 |
|
|
%other cost terms |
| 167 |
|
|
write2tex(fileTex,1,'fit to sst data',1); |
| 168 |
gforget |
1.2 |
cost_sst('',dirMat,0,dirTex,nameTex); |
| 169 |
gforget |
1.1 |
write2tex(fileTex,1,'fit to grace data',1); |
| 170 |
gforget |
1.2 |
cost_bp('',dirMat,0,dirTex,nameTex); |
| 171 |
gforget |
1.3 |
write2tex(fileTex,1,'fit to nsidc data',1); |
| 172 |
|
|
cost_seaicearea('',dirMat,0,dirTex,nameTex); |
| 173 |
gforget |
1.1 |
|
| 174 |
|
|
elseif strcmp(setDiags{ii},'A'); |
| 175 |
|
|
write2tex(fileTex,1,'volume, heat and salt transports',1); |
| 176 |
|
|
diags_display({dirMat,dirMatRef},'A',dirTex,nameTex); |
| 177 |
|
|
|
| 178 |
|
|
elseif strcmp(setDiags{ii},'B'); |
| 179 |
|
|
write2tex(fileTex,1,'mean and variance maps',1); |
| 180 |
|
|
diags_display({dirMat,dirMatRef},'B',dirTex,nameTex); |
| 181 |
|
|
|
| 182 |
|
|
elseif strcmp(setDiags{ii},'C'); |
| 183 |
|
|
write2tex(fileTex,1,'global, zonal, regional averages',1); |
| 184 |
|
|
diags_display({dirMat,dirMatRef},'C',dirTex,nameTex); |
| 185 |
|
|
|
| 186 |
|
|
elseif strcmp(setDiags{ii},'D'); |
| 187 |
|
|
budget_list=1; |
| 188 |
|
|
if ~isempty(dir([dirMat budgetList])); |
| 189 |
|
|
eval(['load ' dirMat budgetList ';']); |
| 190 |
|
|
end; |
| 191 |
|
|
for kk=budget_list; |
| 192 |
|
|
if kk==1; |
| 193 |
|
|
tmp1='(top to bottom)'; |
| 194 |
|
|
else; |
| 195 |
|
|
tmp1=sprintf('(%im to bottom)',round(-mygrid.RF(kk))); |
| 196 |
|
|
end; |
| 197 |
|
|
write2tex(fileTex,1,['budgets : volume, heat and salt ' tmp1],1); |
| 198 |
|
|
diags_display({dirMat,dirMatRef},{'D',kk},dirTex,nameTex); |
| 199 |
|
|
end; |
| 200 |
|
|
|
| 201 |
|
|
elseif strcmp(setDiags{ii},'controls'); |
| 202 |
|
|
%controls |
| 203 |
|
|
write2tex(fileTex,1,'controls',1); |
| 204 |
gforget |
1.2 |
cost_xx('',dirMat,0,dirTex,nameTex); |
| 205 |
gforget |
1.1 |
|
| 206 |
|
|
else; |
| 207 |
|
|
ttl=input('specify tex file section title:\n'); |
| 208 |
|
|
write2tex(fileTex,1,ttl,1); |
| 209 |
|
|
diags_display({dirMat,dirMatRef},setDiags{ii},dirTex,nameTex); |
| 210 |
|
|
|
| 211 |
|
|
end;%if iscell(setDiags{ii}); |
| 212 |
|
|
end;%for ii=1:length(setDiags); |
| 213 |
|
|
|
| 214 |
|
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 215 |
|
|
%finalize tex file |
| 216 |
|
|
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 217 |
|
|
|
| 218 |
|
|
write2tex(fileTex,4); |
| 219 |
|
|
%write2tex(fileTex,5); |
| 220 |
|
|
|
Parent Directory
| 
Revision Log
| 
Revision Graph