/[MITgcm]/MITgcm_contrib/gael/comm/course-idma2016/guidelines/iap-idma-instructions
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Contents of /MITgcm_contrib/gael/comm/course-idma2016/guidelines/iap-idma-instructions

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Revision 1.1 - (show annotations) (download)
Thu Jan 7 20:23:50 2016 UTC (9 years, 6 months ago) by gforget
Branch: MAIN
- first set of instructions

1
2 ---- downloading matlab toolboxes ----
3
4 0) login as guest
5
6 1) open web browser and download setup_gcmfaces_and_mitprof.csh
7 from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/
8
9 notes :
10 to download this script: click on the file name, then
11 on the download button near the top of the page
12 if you are using a windows computer then the shell
13 script method wont do it -- see 'alternative download method'
14
15 2) open terminal window and download tooloxes via shell script:
16 csh
17 mkdir iap-idma
18 mv Downloads/setup_gcmfaces_and_mitprof.csh iap-idma/
19 cd iap-idma
20 source ./setup_gcmfaces_and_mitprof.csh
21
22 notes :
23 disk space requirement ~ 800M (plus session specific items)
24 2011 or later matlab version is needed (for native netcdf implementation)
25
26 2') alternative download method:
27 - open a web browser and go to
28 http://mit.ecco-group.org/opendap/ecco_for_las/version_4/checkpoints/c65r_gcmfaces.tar.gz
29 http://mit.ecco-group.org/opendap/ecco_for_las/version_4/checkpoints/c65r_MITprof.tar.gz
30 - move the two downloaded files to your iap-idma directory
31 - click on each of the two files to unpack c65r_gcmfaces and c65r_MITprof
32 - rename c65r_gcmfaces as gcmfaces and c65r_MITprof as MITprof
33
34 notes :
35 for session 1 you only need MITprof but gcmfaces will come
36 handy later so your might as well download both right away
37 the shell script method uses CVS (see http://mitgcm.org/public/using_cvs.html)
38 and should be preferred if possible (e.g. under linux or IOS on a MAC)
39 since CVS allows for updates later on.
40
41 ---- for session #1 ----
42
43 1,2) same as above (see 'downloading matlab toolboxes')
44
45 3) download idma_float_plot.m from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/comm/course-idma2016/matlab/
46
47 4) in terminal window
48 mv ~/Downloads/idma_float_plot.m ~/iap-idma/.
49
50 5) download Argo etc
51 cd ~/iap-idma
52 mkdir release1
53 wget --recursive ftp://mit.ecco-group.org/ecco_for_las/version_4/release1/MITprof_release1
54 mv mit.ecco-group.org/ecco_for_las/version_4/release1/MITprof_release1 release1/.
55
56 6) start matlab and run idma_float_plot.m
57 matlab
58 addpath matlab/
59 [p]=idma_float_plot('2900828');
60
61 notes :
62 disk space requirement ~ 6.4G (plus 0.8G from steps 1,2)
63 start matlab at command line : matlab -nodesktop
64 idma_float_plot adds the MITprof/ subdirectories to the matlab path

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