/[MITgcm]/MITgcm_contrib/gael/comm/course-idma2016/guidelines/iap-idma-instructions
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revision 1.1 by gforget, Thu Jan 7 20:23:50 2016 UTC revision 1.9 by gforget, Thu Jan 21 19:40:04 2016 UTC
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2  ---- downloading matlab toolboxes ----  This file has been replaced with the pdf version (idma2016-instructions.pdf) available at
3    http://mitgcm.org/viewvc/*checkout*/MITgcm/MITgcm_contrib/gael/comm/course-idma2016/guidelines/idma2016-instructions.pdf
 0) login as guest  
   
 1) open web browser and download setup_gcmfaces_and_mitprof.csh  
    from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/  
   
 notes :  
    to download this script: click on the file name, then  
      on the download button near the top of the page  
    if you are using a windows computer then the shell  
      script method wont do it -- see 'alternative download method'  
   
 2) open terminal window and download tooloxes via shell script:  
    csh  
    mkdir iap-idma  
    mv Downloads/setup_gcmfaces_and_mitprof.csh iap-idma/  
    cd iap-idma  
    source ./setup_gcmfaces_and_mitprof.csh  
   
 notes :  
    disk space requirement ~ 800M (plus session specific items)  
    2011 or later matlab version is needed (for native netcdf implementation)  
   
 2') alternative download method:  
    - open a web browser and go to  
      http://mit.ecco-group.org/opendap/ecco_for_las/version_4/checkpoints/c65r_gcmfaces.tar.gz  
      http://mit.ecco-group.org/opendap/ecco_for_las/version_4/checkpoints/c65r_MITprof.tar.gz  
    - move the two downloaded files to your iap-idma directory  
    - click on each of the two files to unpack c65r_gcmfaces and c65r_MITprof  
    - rename c65r_gcmfaces as gcmfaces and c65r_MITprof as MITprof  
   
 notes :  
    for session 1 you only need MITprof but gcmfaces will come  
       handy later so your might as well download both right away  
    the shell script method uses CVS (see http://mitgcm.org/public/using_cvs.html)  
       and should be preferred if possible (e.g. under linux or IOS on a MAC)  
       since CVS allows for updates later on.  
   
 ---- for session #1 ----  
   
 1,2) same as above (see 'downloading matlab toolboxes')  
   
 3) download idma_float_plot.m from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/comm/course-idma2016/matlab/  
   
 4) in terminal window  
    mv ~/Downloads/idma_float_plot.m ~/iap-idma/.  
   
 5) download Argo etc  
    cd ~/iap-idma  
    mkdir release1  
    wget --recursive ftp://mit.ecco-group.org/ecco_for_las/version_4/release1/MITprof_release1  
    mv mit.ecco-group.org/ecco_for_las/version_4/release1/MITprof_release1 release1/.  
   
 6) start matlab and run idma_float_plot.m  
    matlab  
    addpath matlab/  
    [p]=idma_float_plot('2900828');  
   
 notes :  
    disk space requirement ~ 6.4G (plus 0.8G from steps 1,2)  
    start matlab at command line : matlab -nodesktop  
    idma_float_plot adds the MITprof/ subdirectories to the matlab path  
   
4    

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