/[MITgcm]/MITgcm_contrib/gael/comm/course-idma2016/guidelines/iap-idma-instructions
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revision 1.5 by gforget, Thu Jan 14 14:55:43 2016 UTC revision 1.8 by gforget, Fri Jan 15 03:01:17 2016 UTC
# Line 5  Line 5 
5     called `iap-idma/matlab' and `iap-idma/release1'     called `iap-idma/matlab' and `iap-idma/release1'
6    
7  2) open a web browser and download the following two files:  2) open a web browser and download the following two files:
8       http://mit.ecco-group.org/opendap/ecco_for_las/version_4/checkpoints/c65r_gcmfaces.tar.gz       ftp://mit.ecco-group.org/ecco_for_las/version_4/checkpoints/gcmfaces_20160114.tar.gz
9       http://mit.ecco-group.org/opendap/ecco_for_las/version_4/checkpoints/c65r_MITprof.tar.gz       ftp://mit.ecco-group.org/ecco_for_las/version_4/checkpoints/c65r_MITprof.tar.gz
10    
11  3) move these two files to the idma directory and uncompress them.  3) move these two files to the idma directory and uncompress them.
12    
13  4) the iap-idma directory should now contain two subdirectories  4) the iap-idma directory should now contain two new subdirectories
14     named `c65r_gcmfaces' and `c65r_MITprof'. Rename them simply     named `gcmfaces' and `c65r_MITprof'. Rename c65r_MITprof as `MITprof'.
15     as `gcmfaces' and `MITprof'     At this point the iap-idma directory should contain 'matlab/',
16       'release1/','MITprof/', and 'gmcfaces/'.
17    
18  notes :  notes :
19  - disk space requirement ~ 800M (plus session specific items that will be added later)  - disk space requirement ~ 9M (plus session specific items that will be added later)
20  - 2011 or later matlab version is needed (for native netcdf implementation)  - 2011 or later matlab version is needed (for native netcdf implementation)
21  - for session 1 you only need MITprof but gcmfaces will come  - for session 1 you only need MITprof but gcmfaces will come
22    handy later so your might as well download both right away    handy later so your might as well download both right away
# Line 50  notes : Line 51  notes :
51  - idma_box_subset is the most time consuming of the three  - idma_box_subset is the most time consuming of the three
52    scripts and may take ~3 minutes    scripts and may take ~3 minutes
53    
54    ----- for session #2 -----
55    
56    1) see 'downloading matlab toolboxes'
57       note: make sure to use gcmfaces_20160114.tar.gz or the up to date version of
58             gcmfaces from CVS (rather than c65r_MITprof.tar.gz or earlier versions).
59    2) download the m_map plotting toolbox (use the 'zip archive' link) from
60          https://www.eoas.ubc.ca/~rich/map.html
61       unzip and move it to iap-idma/
62    2) using you favorite ftp client (e.g. fetch in iOS, secureFX in MS-windows,
63       or wget in LINUX) to download the following directory (145M):
64          ftp://mit.ecco-group.org/ecco_for_las/version_4/release1/nctiles_grid
65       and move it to iap-idma/
66    3) using you favorite ftp client (e.g. fetch in iOS, secureFX in MS-windows,
67       or wget in LINUX) to download the following directory (14G):
68          ftp://mit.ecco-group.org/ecco_for_las/version_4/release1/nctiles_climatology
69       and move it to iap-idma/release1/
70    4) start matlab, go to the iap-idma directory, and type:
71          p = genpath([pwd filesep 'gcmfaces/']); addpath(p);
72          p = genpath([pwd filesep 'MITprof/']); addpath(p);
73          p = genpath([pwd filesep 'm_map/']); addpath(p);
74          grid_load;%load ECCO v4 grid into mygrid
75          gcmfaces_global;%declare mygrid as global
76          disp(mygrid);%displays grid variables
77          diags=example_transports;%computes transports (takes ~ 2 minutes)
78          example_transports_disp(diags);%display results
79       then proceed as explained in section 5 of gcmfaces/gcmfaces.pdf
80       to use diags_driver.m and diags_display.m (takes ~ 5 minutes)
81    

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