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- add note related to setup shell script
| 1 | |
| 2 | ---- common to all matlab sessions ---- |
| 3 | |
| 4 | 0) login as guest |
| 5 | |
| 6 | 1) open web browser, and download setup_gcmfaces_and_mitprof.csh |
| 7 | from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/ |
| 8 | |
| 9 | note : |
| 10 | for step 1, please be sure to use the download button |
| 11 | of the browser rather than e.g. wget that can conflict |
| 12 | with the behavior of the CVS web interface |
| 13 | |
| 14 | 2) open terminal window, and proceed to download codes: |
| 15 | csh |
| 16 | mkdir iap-idma |
| 17 | mv Downloads/setup_gcmfaces_and_mitprof.csh iap-idma/ |
| 18 | cd iap-idma |
| 19 | source ./setup_gcmfaces_and_mitprof.csh |
| 20 | |
| 21 | notes : |
| 22 | disk space requirement ~ 800M (plus class specific items) |
| 23 | matlab requirement > 2011 (for native netcdf implementation) |
| 24 | |
| 25 | ---- for class #1 ---- |
| 26 | |
| 27 | 1,2) see 'common to all classes' above |
| 28 | |
| 29 | 3) download idma_float_plot.m from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/comm/course-idma2015/computing/ |
| 30 | |
| 31 | 4) in terminal window |
| 32 | mv ~/Downloads/idma_float_plot.m ~/iap-idma/. |
| 33 | |
| 34 | 5) download Argo etc |
| 35 | cd ~/iap-idma |
| 36 | mkdir release1 |
| 37 | wget --recursive ftp://mit.ecco-group.org/gforget/MITprof |
| 38 | mv mit.ecco-group.org/gforget/MITprof release1/. |
| 39 | |
| 40 | 6) start matlab and run idma_float_plot.m |
| 41 | matlab |
| 42 | [p]=idma_float_plot('2900828'); |
| 43 | |
| 44 | notes : |
| 45 | disk space requirement ~ 6.4G (plus 0.8G from steps 1,2) |
| 46 | start matlab at command line : matlab -nodesktop |
| 47 | |
| 48 | ---- for class #2 ---- |
| 49 | |
| 50 | 1,2) see 'common to all classes' above |
| 51 | |
| 52 | 3) start matlab and run gcmfaces_demo |
| 53 | cd ~/iap-idma |
| 54 | matlab |
| 55 | addpath gcmfaces |
| 56 | gcmfaces_demo |
| 57 | exit |
| 58 | |
| 59 | 4) download ECCO climatology |
| 60 | cd ~/iap-idma |
| 61 | mkdir release1 |
| 62 | |
| 63 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/THETA |
| 64 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/SALT |
| 65 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/UVELMASS |
| 66 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/VVELMASS |
| 67 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'ADVx_*' |
| 68 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'ADVy_*' |
| 69 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'DFxE_*' |
| 70 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'DFyE_*' |
| 71 | mv mit.ecco-group.org/gforget/nctiles_climatology release1/. |
| 72 | |
| 73 | 5) start matlab and run example_transports (or re-run gcmfaces_demo). |
| 74 | cd ~/iap-idma |
| 75 | matlab |
| 76 | addpath gcmfaces |
| 77 | gcmfaces_global |
| 78 | diags=example_transports('v4'); |
| 79 | example_transports_disp(diags); |
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