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- update instructions for matlab sessions #1 and #2
| 1 | |
| 2 | ---- common to all matlab sessions ---- |
| 3 | |
| 4 | 0) login as guest |
| 5 | |
| 6 | 1) open web browser, and download setup_gcmfaces_and_mitprof.csh |
| 7 | from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/ |
| 8 | |
| 9 | 2) open terminal window, and proceed to download codes: |
| 10 | csh |
| 11 | mkdir iap-idma |
| 12 | mv Downloads/setup_gcmfaces_and_mitprof.csh iap-idma/ |
| 13 | cd iap-idma |
| 14 | source ./setup_gcmfaces_and_mitprof.csh |
| 15 | |
| 16 | notes : |
| 17 | disk space requirement ~ 800M (plus class specific items) |
| 18 | matlab requirement > 2011 (for native netcdf implementation) |
| 19 | |
| 20 | ---- for class #1 ---- |
| 21 | |
| 22 | 1,2) see 'common to all classes' above |
| 23 | |
| 24 | 3) download idma_float_plot.m from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/comm/course-idma2015/computing/ |
| 25 | |
| 26 | 4) in terminal window |
| 27 | mv ~/Downloads/idma_float_plot.m ~/iap-idma/. |
| 28 | |
| 29 | 5) download Argo etc |
| 30 | cd ~/iap-idma |
| 31 | mkdir release1 |
| 32 | wget --recursive ftp://mit.ecco-group.org/gforget/MITprof |
| 33 | mv mit.ecco-group.org/gforget/MITprof release1/. |
| 34 | |
| 35 | 6) start matlab and run idma_float_plot.m |
| 36 | matlab |
| 37 | [p]=idma_float_plot('2900828'); |
| 38 | |
| 39 | notes : |
| 40 | disk space requirement ~ 6.4G (plus 0.8G from steps 1,2) |
| 41 | start matlab at command line : matlab -nodesktop |
| 42 | |
| 43 | ---- for class #2 ---- |
| 44 | |
| 45 | 1,2) see 'common to all classes' above |
| 46 | |
| 47 | 3) start matlab and run gcmfaces_demo |
| 48 | cd ~/iap-idma |
| 49 | matlab |
| 50 | addpath gcmfaces |
| 51 | gcmfaces_demo |
| 52 | exit |
| 53 | |
| 54 | 4) download ECCO climatology |
| 55 | cd ~/iap-idma |
| 56 | mkdir release1 |
| 57 | |
| 58 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/THETA |
| 59 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/SALT |
| 60 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/UVELMASS |
| 61 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/VVELMASS |
| 62 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'ADVx_*' |
| 63 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'ADVy_*' |
| 64 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'DFxE_*' |
| 65 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'DFyE_*' |
| 66 | mv mit.ecco-group.org/gforget/nctiles_climatology release1/. |
| 67 | |
| 68 | 5) start matlab and run example_transports (or re-run gcmfaces_demo). |
| 69 | cd ~/iap-idma |
| 70 | matlab |
| 71 | addpath gcmfaces |
| 72 | gcmfaces_global |
| 73 | diags=example_transports('v4'); |
| 74 | example_transports_disp(diags); |
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