/[MITgcm]/MITgcm_contrib/gael/comm/course-idma2015/computing/iap-idma-readme
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revision 1.1 by gforget, Wed Jan 14 17:35:23 2015 UTC revision 1.3 by gforget, Thu Jan 15 18:07:56 2015 UTC
# Line 1  Line 1 
1    
2    ---- common to all matlab sessions ----
3    
4  0) login as guest  0) login as guest
5    
6  1) open web browser, go to:  1) open web browser, and download setup_gcmfaces_and_mitprof.csh
7       http://mitgcm.org/     from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/
    follow links:  
      Source code  
      CVS code browser  
      Parent Directory  
      MITgcm_contrib/  
      gael/  
      setup_gcmfaces_and_mitprof.csh  
      download  
8    
9  2) open terminal window, and proceed to download material:  2) open terminal window, and proceed to download codes:
10       csh
11     mkdir iap-idma     mkdir iap-idma
12     mv Downloads/setup_gcmfaces_and_mitprof.csh iap-idma/     mv Downloads/setup_gcmfaces_and_mitprof.csh iap-idma/
13     cd iap-idma     cd iap-idma
    alias matlab /usr/local/matlab_2012a/bin/matlab  
14     source ./setup_gcmfaces_and_mitprof.csh     source ./setup_gcmfaces_and_mitprof.csh
15    
16  notes :  notes :
17     disk space requirement ~ 800M + 13G from item #4     disk space requirement ~ 800M (plus class specific items)
18     matlab requirement > 2011 (for native netcdf implementation)     matlab requirement > 2011 (for native netcdf implementation)
19    
20    ---- for class #1 ----
21    
22    1,2) see 'common to all classes' above
23    
24    3) download idma_float_plot.m from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/comm/course-idma2015/computing/
25    
26    4) in terminal window
27       mv ~/Downloads/idma_float_plot.m ~/iap-idma/.
28    
29    5) download Argo etc
30       cd ~/iap-idma
31       mkdir release1
32       wget --recursive ftp://mit.ecco-group.org/gforget/MITprof
33       mv mit.ecco-group.org/gforget/MITprof release1/.
34    
35    6) start matlab and run idma_float_plot.m
36       matlab
37       [p]=idma_float_plot('2900828');
38    
39    notes :
40       disk space requirement ~ 6.4G (plus 0.8G from steps 1,2)
41       start matlab at command line : matlab -nodesktop
42    
43    ---- for class #2 ----
44    
45    1,2) see 'common to all classes' above
46    
47  3) start matlab and run gcmfaces_demo  3) start matlab and run gcmfaces_demo
48     /usr/local/matlab_2012a/bin/matlab     cd ~/iap-idma
49       matlab
50     addpath gcmfaces     addpath gcmfaces
51     gcmfaces_demo     gcmfaces_demo
52       exit
53        
54  4) download Argo and ECCO climatology  4) download ECCO climatology
55       cd ~/iap-idma
56     mkdir release1     mkdir release1
    wget --recursive ftp://mit.ecco-group.org/gforget/MITprof  
    mv mit.ecco-group.org/gforget/MITprof release1/.  
57    
58     wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/THETA     wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/THETA
59     wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/SALT     wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/SALT
# Line 43  notes : Line 66  notes :
66     mv mit.ecco-group.org/gforget/nctiles_climatology release1/.     mv mit.ecco-group.org/gforget/nctiles_climatology release1/.
67    
68  5) start matlab and run example_transports (or re-run gcmfaces_demo).  5) start matlab and run example_transports (or re-run gcmfaces_demo).
69     /usr/local/matlab_2012a/bin/matlab     cd ~/iap-idma
70       matlab
71     addpath gcmfaces     addpath gcmfaces
72     gcmfaces_global     gcmfaces_global
73     diags=example_transports('v4');     diags=example_transports('v4');
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