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- add note related to setup shell script
| 1 | gforget | 1.2 | |
| 2 | gforget | 1.3 | ---- common to all matlab sessions ---- |
| 3 | gforget | 1.2 | |
| 4 | gforget | 1.1 | 0) login as guest |
| 5 | |||
| 6 | gforget | 1.2 | 1) open web browser, and download setup_gcmfaces_and_mitprof.csh |
| 7 | from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/ | ||
| 8 | gforget | 1.1 | |
| 9 | gforget | 1.4 | note : |
| 10 | for step 1, please be sure to use the download button | ||
| 11 | of the browser rather than e.g. wget that can conflict | ||
| 12 | with the behavior of the CVS web interface | ||
| 13 | |||
| 14 | gforget | 1.2 | 2) open terminal window, and proceed to download codes: |
| 15 | csh | ||
| 16 | gforget | 1.1 | mkdir iap-idma |
| 17 | mv Downloads/setup_gcmfaces_and_mitprof.csh iap-idma/ | ||
| 18 | cd iap-idma | ||
| 19 | source ./setup_gcmfaces_and_mitprof.csh | ||
| 20 | |||
| 21 | notes : | ||
| 22 | gforget | 1.2 | disk space requirement ~ 800M (plus class specific items) |
| 23 | gforget | 1.1 | matlab requirement > 2011 (for native netcdf implementation) |
| 24 | |||
| 25 | gforget | 1.2 | ---- for class #1 ---- |
| 26 | |||
| 27 | 1,2) see 'common to all classes' above | ||
| 28 | |||
| 29 | 3) download idma_float_plot.m from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/comm/course-idma2015/computing/ | ||
| 30 | |||
| 31 | 4) in terminal window | ||
| 32 | mv ~/Downloads/idma_float_plot.m ~/iap-idma/. | ||
| 33 | |||
| 34 | gforget | 1.3 | 5) download Argo etc |
| 35 | cd ~/iap-idma | ||
| 36 | gforget | 1.2 | mkdir release1 |
| 37 | wget --recursive ftp://mit.ecco-group.org/gforget/MITprof | ||
| 38 | mv mit.ecco-group.org/gforget/MITprof release1/. | ||
| 39 | |||
| 40 | gforget | 1.3 | 6) start matlab and run idma_float_plot.m |
| 41 | gforget | 1.2 | matlab |
| 42 | [p]=idma_float_plot('2900828'); | ||
| 43 | |||
| 44 | notes : | ||
| 45 | disk space requirement ~ 6.4G (plus 0.8G from steps 1,2) | ||
| 46 | start matlab at command line : matlab -nodesktop | ||
| 47 | |||
| 48 | ---- for class #2 ---- | ||
| 49 | |||
| 50 | gforget | 1.3 | 1,2) see 'common to all classes' above |
| 51 | |||
| 52 | gforget | 1.1 | 3) start matlab and run gcmfaces_demo |
| 53 | gforget | 1.3 | cd ~/iap-idma |
| 54 | gforget | 1.2 | matlab |
| 55 | gforget | 1.1 | addpath gcmfaces |
| 56 | gcmfaces_demo | ||
| 57 | gforget | 1.3 | exit |
| 58 | gforget | 1.1 | |
| 59 | gforget | 1.2 | 4) download ECCO climatology |
| 60 | gforget | 1.3 | cd ~/iap-idma |
| 61 | gforget | 1.1 | mkdir release1 |
| 62 | |||
| 63 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/THETA | ||
| 64 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/SALT | ||
| 65 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/UVELMASS | ||
| 66 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/VVELMASS | ||
| 67 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'ADVx_*' | ||
| 68 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'ADVy_*' | ||
| 69 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'DFxE_*' | ||
| 70 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'DFyE_*' | ||
| 71 | mv mit.ecco-group.org/gforget/nctiles_climatology release1/. | ||
| 72 | |||
| 73 | 5) start matlab and run example_transports (or re-run gcmfaces_demo). | ||
| 74 | gforget | 1.3 | cd ~/iap-idma |
| 75 | matlab | ||
| 76 | gforget | 1.1 | addpath gcmfaces |
| 77 | gcmfaces_global | ||
| 78 | diags=example_transports('v4'); | ||
| 79 | example_transports_disp(diags); |
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