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- update instructions for matlab sessions #1 and #2
| 1 | gforget | 1.2 | |
| 2 | gforget | 1.3 | ---- common to all matlab sessions ---- |
| 3 | gforget | 1.2 | |
| 4 | gforget | 1.1 | 0) login as guest |
| 5 | |||
| 6 | gforget | 1.2 | 1) open web browser, and download setup_gcmfaces_and_mitprof.csh |
| 7 | from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/ | ||
| 8 | gforget | 1.1 | |
| 9 | gforget | 1.2 | 2) open terminal window, and proceed to download codes: |
| 10 | csh | ||
| 11 | gforget | 1.1 | mkdir iap-idma |
| 12 | mv Downloads/setup_gcmfaces_and_mitprof.csh iap-idma/ | ||
| 13 | cd iap-idma | ||
| 14 | source ./setup_gcmfaces_and_mitprof.csh | ||
| 15 | |||
| 16 | notes : | ||
| 17 | gforget | 1.2 | disk space requirement ~ 800M (plus class specific items) |
| 18 | gforget | 1.1 | matlab requirement > 2011 (for native netcdf implementation) |
| 19 | |||
| 20 | gforget | 1.2 | ---- for class #1 ---- |
| 21 | |||
| 22 | 1,2) see 'common to all classes' above | ||
| 23 | |||
| 24 | 3) download idma_float_plot.m from http://mitgcm.org/viewvc/MITgcm/MITgcm_contrib/gael/comm/course-idma2015/computing/ | ||
| 25 | |||
| 26 | 4) in terminal window | ||
| 27 | mv ~/Downloads/idma_float_plot.m ~/iap-idma/. | ||
| 28 | |||
| 29 | gforget | 1.3 | 5) download Argo etc |
| 30 | cd ~/iap-idma | ||
| 31 | gforget | 1.2 | mkdir release1 |
| 32 | wget --recursive ftp://mit.ecco-group.org/gforget/MITprof | ||
| 33 | mv mit.ecco-group.org/gforget/MITprof release1/. | ||
| 34 | |||
| 35 | gforget | 1.3 | 6) start matlab and run idma_float_plot.m |
| 36 | gforget | 1.2 | matlab |
| 37 | [p]=idma_float_plot('2900828'); | ||
| 38 | |||
| 39 | notes : | ||
| 40 | disk space requirement ~ 6.4G (plus 0.8G from steps 1,2) | ||
| 41 | start matlab at command line : matlab -nodesktop | ||
| 42 | |||
| 43 | ---- for class #2 ---- | ||
| 44 | |||
| 45 | gforget | 1.3 | 1,2) see 'common to all classes' above |
| 46 | |||
| 47 | gforget | 1.1 | 3) start matlab and run gcmfaces_demo |
| 48 | gforget | 1.3 | cd ~/iap-idma |
| 49 | gforget | 1.2 | matlab |
| 50 | gforget | 1.1 | addpath gcmfaces |
| 51 | gcmfaces_demo | ||
| 52 | gforget | 1.3 | exit |
| 53 | gforget | 1.1 | |
| 54 | gforget | 1.2 | 4) download ECCO climatology |
| 55 | gforget | 1.3 | cd ~/iap-idma |
| 56 | gforget | 1.1 | mkdir release1 |
| 57 | |||
| 58 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/THETA | ||
| 59 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/SALT | ||
| 60 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/UVELMASS | ||
| 61 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/VVELMASS | ||
| 62 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'ADVx_*' | ||
| 63 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'ADVy_*' | ||
| 64 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'DFxE_*' | ||
| 65 | wget --recursive ftp://mit.ecco-group.org/gforget/nctiles_climatology/'DFyE_*' | ||
| 66 | mv mit.ecco-group.org/gforget/nctiles_climatology release1/. | ||
| 67 | |||
| 68 | 5) start matlab and run example_transports (or re-run gcmfaces_demo). | ||
| 69 | gforget | 1.3 | cd ~/iap-idma |
| 70 | matlab | ||
| 71 | gforget | 1.1 | addpath gcmfaces |
| 72 | gcmfaces_global | ||
| 73 | diags=example_transports('v4'); | ||
| 74 | example_transports_disp(diags); |
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