| 15 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | 
| 16 |  |  | 
| 17 | datacpl = rdmnc(cplFiles,'iter','HFtave','TXtave',... | datacpl = rdmnc(cplFiles,'iter','HFtave','TXtave',... | 
| 18 | 'TYtave','FWtave','SICtave'); | 'TYtave','FWtave','SICtave','T'); | 
| 19 | datagrd = rdmnc(gridFiles,'rA','XG','YG','XC','YC'); | datagrd = rdmnc(gridFiles,'rA','XG','YG','XC','YC','HFacC'); | 
| 20 | RAC = datagrd.rA; | RAC = datagrd.rA; | 
| 21 |  | HFacC = datagrd.HFacC; | 
| 22 | XC = datagrd.XC; XG = datagrd.XG(1:size(RAC,1),1:size(RAC,2)); | XC = datagrd.XC; XG = datagrd.XG(1:size(RAC,1),1:size(RAC,2)); | 
| 23 | YC = datagrd.YC; YG = datagrd.YG(1:size(RAC,1),1:size(RAC,2)); | YC = datagrd.YC; YG = datagrd.YG(1:size(RAC,1),1:size(RAC,2)); | 
| 24 | %save('DataPerCpl.mat','datacpl','RAC','XG','YG','XC','YC'); | % save('DataPerCpl.mat','datacpl','RAC','XG','YG','XC','YC','HFacC'); | 
| 25 | %load('DataPerCpl.mat'); | % load('DataPerCpl.mat'); | 
| 26 |  | HFacC_Top = HFacC(:,:,1); | 
| 27 |  |  | 
| 28 | % If a new focn is to be calculated, the old Focn must be loaded. | % If a new focn is to be calculated, the old Focn must be loaded. | 
| 29 | if ~FocnOnly | if ~FocnOnly | 
| 36 | fclose(fid); | fclose(fid); | 
| 37 | end | end | 
| 38 | end | end | 
| 39 |  | % merccube_mod(XG,YG,dataFocnOld.HF); | 
| 40 |  | % aaa = dataFocnOld.HF; | 
| 41 |  | % sum(aaa(:).*RAC(:))./sum(RAC(:)) | 
| 42 |  |  | 
| 43 |  |  | 
| 44 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | 
| 54 | dataCplSelect.([mncfld{ifield},'tave']) = ... | dataCplSelect.([mncfld{ifield},'tave']) = ... | 
| 55 | datacpl.([mncfld{ifield},'tave'])(:,:,index); | datacpl.([mncfld{ifield},'tave'])(:,:,index); | 
| 56 | end | end | 
| 57 |  | % merccube_mod(XG,YG,dataCplSelect.HFtave(:,:,end)); | 
| 58 |  | % aaa = dataCplSelect.HFtave(:,:,end); | 
| 59 |  | % sum(aaa(:).*RAC(:))./sum(RAC(:)) | 
| 60 |  |  | 
| 61 |  |  | 
| 62 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | 
| 67 | % treatment of finding Focn.  Should compute monthly mean before.  Test | % treatment of finding Focn.  Should compute monthly mean before.  Test | 
| 68 | % with various sorts of coupled field outputs. | % with various sorts of coupled field outputs. | 
| 69 | for ifield = 1:length(mncfld) | for ifield = 1:length(mncfld) | 
| 70 | FocnNew = mean(dataCplSelect.([mncfld{ifield},'tave']),3); | FocnNew = HFacC_Top.*mean(dataCplSelect.([mncfld{ifield},'tave']),3); | 
| 71 | FocnNew = DataCorrections(FocnNew,mncfld{ifield},gravity,RAC); | FocnNew = DataCorrections(FocnNew,mncfld{ifield},gravity,RAC,HFacC_Top); | 
| 72 | if FocnOnly | if FocnOnly | 
| 73 | Focn = FocnNew; | Focn = FocnNew; | 
| 74 | else | else | 
| 75 | FocnOld = dataFocnOld.(mncfld{ifield}); | FocnOld = HFacC_Top.*dataFocnOld.(mncfld{ifield}); | 
| 76 | if isequal(mncfld{ifield},'FW') | if isequal(mncfld{ifield},'FW') | 
| 77 | FocnOld = DataCorrections(FocnOld,mncfld{ifield},gravity,RAC); | FocnOld = DataCorrections(FocnOld,mncfld{ifield},... | 
| 78 |  | gravity,RAC,HFacC_Top); | 
| 79 | end | end | 
| 80 | Focn = (gWeight*FocnOld + FocnNew)/(gWeight+1); | Focn = (gWeight*FocnOld + FocnNew)/(gWeight+1); | 
| 81 | end | end | 
| 85 | fclose(fid); | fclose(fid); | 
| 86 | dataFocn.(mncfld{ifield}) = Focn; | dataFocn.(mncfld{ifield}) = Focn; | 
| 87 | end | end | 
| 88 |  | % merccube_mod(XG,YG,dataFocn.HF); | 
| 89 |  | % aaa = dataFocn.HF(:,:,end); | 
| 90 |  | % sum(aaa(:).*RAC(:))./sum(RAC(:)) | 
| 91 |  |  | 
| 92 |  |  | 
| 93 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | 
| 94 | %                         Prepare focn as needed                          % | %                         Prepare focn as needed                          % | 
| 95 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | 
| 96 |  |  | 
| 97 |  | % Must account for land!!!! | 
| 98 | if ~FocnOnly | if ~FocnOnly | 
| 99 |  |  | 
| 100 | years = [iitC:ditC:fitC].*dtC./31104000; | years = [iitC:ditC:fitC].*dtC./31104000; | 
| 101 | yrfrc = rem(years,floor(years)); | yrfrc = rem(years,floor(years)); | 
| 102 | yrfrc(yrfrc == 0) = 1; | yrfrc(yrfrc == 0) = 1; | 
| 103 | uyrfrc = sort(unique(yrfrc)); | uyrfrc = sort(unique(yrfrc)); | 
| 104 | length(yrfrc) | disp(['Cpl. data instances:  ',num2str(length(yrfrc))]); | 
| 105 | length(uyrfrc) | disp(['Cpl. data per year forcing:  ',length(uyrfrc)]); | 
| 106 |  |  | 
| 107 | for ifield = 1:length(mncfld) | for ifield = 1:length(mncfld) | 
| 108 |  |  | 
| 109 | % Make yearly forcing file. | % Make yearly forcing file (usually twelve months). | 
| 110 | focnFull = dataCplSelect.([mncfld{ifield},'tave']); | focnFull = dataCplSelect.([mncfld{ifield},'tave']); | 
| 111 | focn = NaN.*zeros([size(RAC,1),size(RAC,2),length(uyrfrc)]); | focn = NaN.*zeros([size(RAC,1),size(RAC,2),length(uyrfrc)]); | 
| 112 | for itime = 1:length(uyrfrc) | for itime = 1:length(uyrfrc) | 
| 117 | error('NaNs in ocean forcing files!!'); | error('NaNs in ocean forcing files!!'); | 
| 118 | end | end | 
| 119 |  |  | 
| 120 | % Remove mean, add Focn | % Account for bathymetry. | 
| 121 |  | for itime = 1:size(focn,3) | 
| 122 |  | focn(:,:,itime) = HFacC_Top.*focn(:,:,itime); | 
| 123 |  | end | 
| 124 |  |  | 
| 125 |  | % Remove time mean from focn, add Focn | 
| 126 | SubMean = mean(focn,3); | SubMean = mean(focn,3); | 
| 127 | AddMean = dataFocn.(mncfld{ifield}); | AddMean = dataFocn.(mncfld{ifield}); | 
| 128 | for itime = 1:size(focn,3) | for itime = 1:size(focn,3) | 
| 136 | focn = focn.*iceMask; | focn = focn.*iceMask; | 
| 137 | end | end | 
| 138 |  |  | 
|  |  |  | 
| 139 | focnmean = mean(focn,3); | focnmean = mean(focn,3); | 
| 140 | focnmean = sum(focnmean(:).*RAC(:))./sum(RAC(:)); | focnmean = sum(focnmean(:).*RAC(:))./sum(RAC(:)); | 
| 141 | disp([mncfld{ifield},' mean:  ',num2str(focnmean)]); | disp([mncfld{ifield},' mean:  ',num2str(focnmean)]); | 
| 143 | fid=fopen([outDir,'/',focnRoot,'.',fields{ifield},'.bin'],'w','b'); | fid=fopen([outDir,'/',focnRoot,'.',fields{ifield},'.bin'],'w','b'); | 
| 144 | fwrite(fid,focn,'real*8'); | fwrite(fid,focn,'real*8'); | 
| 145 | fclose(fid); | fclose(fid); | 
| 146 |  |  | 
| 147 |  | aaa = mean(focn,3); | 
| 148 |  | disp(['Number of land cells that do not have zero values:  ',... | 
| 149 |  | num2str(length(find(aaa(find(~HFacC_Top))~=0)))]); | 
| 150 | end | end | 
| 151 | end | end | 
| 152 |  |  | 
| 153 |  |  | 
| 154 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | 
| 155 | %                            Inspect Focn                                 % | %                            Inspect Focn                                 % | 
| 156 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% | 
| 161 | '.bin.',num2str(period)],'r','b'); | '.bin.',num2str(period)],'r','b'); | 
| 162 | Focn = reshape(fread(fid,'real*8'),size(RAC)); | Focn = reshape(fread(fid,'real*8'),size(RAC)); | 
| 163 | fclose(fid); | fclose(fid); | 
| 164 | figure(ifield); | figure; | 
| 165 | merccube(XG,YG,Focn); colorbar; | merccube_mod(XG,YG,Focn); colorbar; | 
| 166 | title(mncfld{ifield}); | title(mncfld{ifield}); | 
| 167 | end | end | 
| 168 | end | end | 
| 169 |  |  | 
| 170 | if Inspectfocn | if Inspectfocn | 
| 171 | for ifield = 1:length(mncfld) | for ifield = 1:length(mncfld) | 
| 172 | figure(ifield); orient tall; | figure; orient tall; | 
| 173 | fid=fopen([outDir,'/',focnRoot,'.',fields{ifield},'.bin'],'r','b'); | fid=fopen([outDir,'/',focnRoot,'.',fields{ifield},'.bin'],'r','b'); | 
| 174 | focn = reshape(fread(fid,'real*8'),[size(RAC),12]); | focn = reshape(fread(fid,'real*8'),[size(RAC),12]); | 
| 175 | fclose(fid); | fclose(fid); | 
| 176 | crange = [min(focn(:)),max(focn(:))]; | crange = [min(focn(:)),max(focn(:))]; | 
| 177 | for ii = 1:size(focn,3) | for ii = 1:size(focn,3) | 
| 178 | subplot(4,3,ii); merccube(XG,YG,focn(:,:,ii)); | subplot(4,3,ii); merccube_mod(XG,YG,focn(:,:,ii)); | 
| 179 | shading flat; caxis(crange); colorbar; | shading flat; caxis(crange); colorbar; | 
| 180 | title([mncfld{ifield},' month ',num2str(ii)]); | title([mncfld{ifield},' month ',num2str(ii)]); | 
| 181 | end | end | 
| 185 |  |  | 
| 186 | % Field dependent data corrections. | % Field dependent data corrections. | 
| 187 | function CorrectedData = ... | function CorrectedData = ... | 
| 188 | DataCorrections(DataToCorrect,CorrectionField,gravity,RAC) | DataCorrections(DataToCorrect,CorrectionField,gravity,RAC,HFacC_Top) | 
| 189 |  | index = find(HFacC_Top); | 
| 190 |  | correctdim = size(DataToCorrect); | 
| 191 |  | DataToCorrect = DataToCorrect(:); | 
| 192 | if     isequal(CorrectionField,'SIC') | if     isequal(CorrectionField,'SIC') | 
| 193 | CorrectedData = gravity.*DataToCorrect; | CorrectedData(index) = gravity.*DataToCorrect(index); | 
| 194 | elseif isequal(CorrectionField,'FW') | elseif isequal(CorrectionField,'FW') | 
| 195 | offset = sum(DataToCorrect(:).*RAC(:))./sum(RAC(:)); | DataToCorrect(index); | 
| 196 | CorrectedData = DataToCorrect - offset; | offset = sum(DataToCorrect(index).*RAC(index))./sum(RAC(index)); | 
| 197 |  | CorrectedData(index) = DataToCorrect(index) - offset; | 
| 198 | else | else | 
| 199 | CorrectedData = DataToCorrect; | CorrectedData(index) = DataToCorrect(index); | 
| 200 | end | end | 
| 201 |  | CorrectedData = reshape(CorrectedData,correctdim); | 
| 202 |  |  |