Diff of /MITgcm_contrib/enderton/Diagnostics/DiagLoadGradsData.m

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--- MITgcm_contrib/enderton/Diagnostics/DiagLoadGradsData.m	2005/01/31 15:43:26	1.1
+++ MITgcm_contrib/enderton/Diagnostics/DiagLoadGradsData.m	2005/01/31 19:58:15	1.2
@@ -1,10 +1,16 @@
 function [data,xax,yax,zax,months,time,dim] = ...
-    DiagLoadGradsData(Grads,dad,fln)
+    DiagLoadGradsData(Grads,dad,fln,DiagDebug)
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%                          Parse table file                               %
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+format = 'NONSEQUENTIAL';
 
-% Read table file.
 tablfile = [dad,'/',Grads,'.tabl'];
-datafile = [dad,'/',Grads,'.data'];
 file = textread(tablfile,'%s','delimiter','\n','whitespace','');
+
 for iline = 1:length(file)
     rem = file{iline}; tokens = {}; itoken = 0;
     while isstr(rem)
@@ -74,7 +80,8 @@
         elseif isequal(monchar,'NOV'), inimonth = 11;
         elseif isequal(monchar,'DEC'), inimonth = 12; end
         num = str2num(tokens{2});
-        months=[inimonth:num]; time=months/12; nt = length(months);
+        months=[inimonth:num+inimonth-1];
+        time=months/12; nt = length(months);
         
     end
     
@@ -82,21 +89,39 @@
         nv = str2num(tokens{2});
         VARSline = iline;
     end
-    
     if isequal(tokens{1},fln)
         FIELDline = iline;
-        index = iline - VARSline;
+        ivar = iline - VARSline;
     end
     
     if isequal(tokens{1},'UNDEF')
         undef = str2num(tokens{2});
     end
     
+    if isequal(tokens{1},'FORMAT')
+        if isequal(tokens{2},'SEQUENTIAL')
+            format = 'SEQUENTIAL';
+        else
+            disp(['Unrecognized grads FORMAT:  ',tokens{2}]);
+        end
+    end 
+    
+    if isequal(tokens{1},'DSET')
+        datafile = [dad,tokens{2}(2:end)];
+    end  
+    
 end
 
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%                       Verification and debugging                        %
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+if DiagDebug, disp(['  Debug -- grads data format:  ',format]); end
+
 % Verify that things are there.
-parameters = {'xax' ,'yax' ,'zax' ,'time','nv'  ,'undef','index'};
-GRADSnames = {'XDEF','YDEF','ZDEF','TDEF','VARS','UNDEF',fln    };
+parameters = {'xax' ,'yax' ,'zax' ,'time','nv'  ,'undef','ivar'};
+GRADSnames = {'XDEF','YDEF','ZDEF','TDEF','VARS','UNDEF',fln   };
 for ii = 1:length(parameters)
     try
         eval([parameters{ii},';']);
@@ -105,11 +130,21 @@
     end
 end
 
-% Read in grads data using axis infomation.
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%                              Read data file                             %
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
 tol = 1e-5;
 fid=fopen(datafile,'r','b');
 data = fread(fid,'real*4');
 fclose(fid);
+if isequal(format,'SEQUENTIAL')
+    index=true([nx*ny*nz*nv*nt+2*nv*nt,1]);
+    index([1:nx*ny*nz+2:end])=false;
+    index([2:nx*ny*nz+2:end])=false;
+    data = data(index);
+end
 data = reshape(data,[nx,ny,nz,nv,nt]);
-data = squeeze(data(:,:,:,index,:));
+data = squeeze(data(:,:,:,ivar,:));
 data( abs((data-undef)/undef) < tol ) = NaN;
\ No newline at end of file