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enderton |
1.1 |
#! /usr/bin/env bash |
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mat_matscript=$1 |
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mat_exp=$2 |
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mat_runDir=$3 |
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mat_dirroot=$4 |
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mat_outputdir=$5 |
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mat_dtA=$6 |
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mat_dtO=$7 |
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mat_iitA=$8 |
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mat_nitunitA=$9 |
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mat_fitA=${10} |
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mat_iitO=${11} |
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mat_nitunitO=${12} |
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mat_fitO=${13} |
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mat_iitC=${14} |
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mat_nitunitC=${15} |
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mat_fitC=${16} |
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mat_matscript_var="analysis/"$mat_matscript"_Variable.m" |
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mat_matscript_fix="analysis/"$mat_matscript"_Fixed.m" |
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mat_matscript_fin="analysis/"$mat_matscript".m" |
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mat_pbsscript="analysis/"$mat_matscript"_PBS" |
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rm -f $mat_matscript_fin $mat_matscript_var $mat_pbsscript |
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########################################################################### |
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# Variable section of diagnostics script # |
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########################################################################### |
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echo "close all;" >> $mat_matscript_var |
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echo "clear all;" >> $mat_matscript_var |
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echo "" >> $mat_matscript_var |
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echo "exp='"$mat_exp"';" >> $mat_matscript_var |
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echo "outputdir='"$mat_outputdir"';" >> $mat_matscript_var |
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echo "dirroot='"$mat_dirroot"';" >> $mat_matscript_var |
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echo "atmtavedir=[dirroot,'/Atm/TimeAverage/'];" >> $mat_matscript_var |
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echo "aimtavedir=[dirroot,'/Atm/Aim/'];" >> $mat_matscript_var |
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echo "ocntavedir=[dirroot,'/Ocn/TimeAverage/'];" >> $mat_matscript_var |
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echo "icetavedir=[dirroot,'/Ice/'];" >> $mat_matscript_var |
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echo "cpltavedir=[dirroot,'/CplFld/'];" >> $mat_matscript_var |
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echo "atmgriddir=[dirroot,'/Atm/Grid/'];" >> $mat_matscript_var |
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echo "ocngriddir=[dirroot,'/Ocn/Grid/'];" >> $mat_matscript_var |
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echo "" >> $mat_matscript_var |
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echo "dtA="$mat_dtA";" >> $mat_matscript_var |
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echo "dtO="$mat_dtO";" >> $mat_matscript_var |
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echo "itA=["$mat_iitA":"$mat_nitunitA":"$mat_fitA"];" >> $mat_matscript_var |
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echo "itO=["$mat_iitO":"$mat_nitunitO":"$mat_fitO"];" >> $mat_matscript_var |
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echo "itC=["$mat_iitC":"$mat_nitunitC":"$mat_fitC"];" >> $mat_matscript_var |
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# Make full analysis script. |
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cat $mat_matscript_var $mat_matscript_fix > $mat_matscript_fin |
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# Make PBS script |
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echo "#PBS -N DiagPlots" >> $mat_pbsscript |
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echo "#PBS -l nodes=1" >> $mat_pbsscript |
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echo "#PBS -V" >> $mat_pbsscript |
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echo "#PBS -q four" >> $mat_pbsscript |
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echo "" >> $mat_pbsscript |
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echo "cd "$runDir"/analysis" >> $mat_pbsscript |
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echo "" >> $mat_pbsscript |
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echo ". /etc/profile.d/modules.sh" >> $mat_pbsscript |
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echo "module add matlab" >> $mat_pbsscript |
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echo "" >> $mat_pbsscript |
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echo "matlab < "$mat_matscript".m > "$mat_matscript"_MatLog" >> $mat_pbsscript |
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