/[MITgcm]/MITgcm_contrib/ecco_darwin/v4_llc270/readme_darwin.txt
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revision 1.1 by dimitri, Fri Dec 1 19:02:10 2017 UTC revision 1.2 by dimitri, Fri Dec 1 21:19:03 2017 UTC
# Line 7  ln -sf ../../MITgcm_contrib/darwin/pkg/d Line 7  ln -sf ../../MITgcm_contrib/darwin/pkg/d
7  cd ..  cd ..
8  mkdir build  mkdir build
9  cd build  cd build
 cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/code_darwin/packages.conf .  
10  module purge  module purge
11  module load comp-intel/2016.2.181 mpi-sgi/mpt.2.14r19 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt  module load comp-intel/2016.2.181 mpi-sgi/mpt.2.14r19 hdf4/4.2.12 hdf5/1.8.18_mpt netcdf/4.4.1.1_mpt
12  ../tools/genmake2 -of \  ../tools/genmake2 -of \
13    ../../MITgcm_contrib/ecco_darwin/v4_llc270/code/linux_amd64_ifort+mpi_ice_nas -mo \    ../../MITgcm_contrib/ecco_darwin/v4_llc270/code/linux_amd64_ifort+mpi_ice_nas \
14    '../../MITgcm_contrib/ecco_darwin/v4_llc270/code_darwin ../../MITgcm_contrib/ecco_darwin/v4_llc270/code'    -mo ../../MITgcm_contrib/ecco_darwin/v4_llc270/code \
15      -mo ../../MITgcm_contrib/ecco_darwin/v4_llc270/code_darwin
16  make depend  make depend
17  make -j 16  make -j 16
18    
19    
20  ==============  ==============
21  # Instructions for running forward-only llc270 optimized solution (2001-2015)  # Instructions for running ECCO-Darwin Version 4 for 2009-2015 period
 cd ..  
 mkdir run  
 cd run  
 ln -sf ../build/mitgcmuv .  
 cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/input/* .  
 ln -sf /nobackup/hzhang1/obs/input/bathy270_filled_noCaspian_r4 .  
 ln -sf /nobackup/hzhang1/forcing/era_xx .  
 ln -sf /nobackup/hzhang1/obs/input/pickup* .  
 ln -sf /nobackup/hzhang1/obs/input/runoff-2d-Fekete-1deg-mon-V4-SMOOTH.bin .  
 ln -sf /nobackup/hzhang1/obs/pri_err/smooth* .  
 ln -sf /nobackup/hzhang1/obs/input/tile* .  
 ln -sf /nobackup/hzhang1/pub/llc270_FWD/input/w*data .  
 ln -sf /nobackup/hzhang1/obs/optim33/xx_* .  
 # modify job_llc270_fdH as needed  
 qsub job_llc270_fdH  
   
   
 ==============  
 # Instructions for running forward-only llc270 optimized solution (2009-2015)  
22  cd ..  cd ..
23  mkdir run  mkdir run
24  cd run  cd run
25  ln -sf ../build/mitgcmuv .  ln -sf ../build/mitgcmuv .
26  cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/input/* .  cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/input/* .
27    cp ../../MITgcm_contrib/ecco_darwin/v4_llc270/input_darwin/* .
28  cp data_2009 data  cp data_2009 data
29  cp data.ctrl_2009 data.ctrl  cp data.ctrl_2009 data.ctrl
30  ln -sf /nobackup/hzhang1/obs/input/bathy270_filled_noCaspian_r4 .  ln -sf /nobackup/hzhang1/obs/input/bathy270_filled_noCaspian_r4 .
# Line 53  ln -sf /nobackup/hzhang1/obs/pri_err/smo Line 35  ln -sf /nobackup/hzhang1/obs/pri_err/smo
35  ln -sf /nobackup/hzhang1/obs/input/tile* .  ln -sf /nobackup/hzhang1/obs/input/tile* .
36  ln -sf /nobackup/hzhang1/pub/llc270_FWD/input/w*data .  ln -sf /nobackup/hzhang1/pub/llc270_FWD/input/w*data .
37  ln -sf /nobackup/hzhang1/obs/optim33/xx_* .  ln -sf /nobackup/hzhang1/obs/optim33/xx_* .
38    ln -sf /nobackup/hbrix/ICBC/pco2a_blended_* .
39    ln -sf pco2a_blended_2012 pco2a_blended_2013
40    ln -sf pco2a_blended_2012 pco2a_blended_2014
41    ln -sf pco2a_blended_2012 pco2a_blended_2015
42    ln -sf pco2a_blended_2012 pco2a_blended_2016
43    ln -sf ~dmenemen/CMS/run_template_cg1/darwin* .
44    ln -sf /nobackup/dcarrol2/temp/pickup_llc270_dic.gf_cg1.0000078912.data pickup_dic.0000078912.data
45    ln -sf /nobackup/dcarrol2/temp/pickup_llc270_ptracers.gf_cg1.0000078912.data pickup_ptracers.0000078912.data
46    ln -sf /nobackup/dcarrol2/temp/pickup*.meta .
47    ln -sf /nobackup/hzhang1/cs510/ICBC_2009/pickup*.0000000001.??ta .
48    ln -sf /nobackup/dmenemen/forcing/runoff/runoff-360x180x12.bin .
49    ln -sf /nobackup/hzhang1/cs510/run_template/tile00* .
50  # modify job_llc270_fdH as needed  # modify job_llc270_fdH as needed
51  qsub job_llc270_fdH  qsub job_llc270_fdH
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