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function [ub,vb]=calcBolusVelCube(d,g,GMform); |
function [ub,vb,wb]=calcBolusVelCube(d,g,GMform); |
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3 |
% [ub,vb] = calcBolusVelCube(d,g,GMform); |
% [ub,vb] = calcBolusVelCube(d,g,GMform); |
4 |
% |
% |
44 |
ra = reshape(g.rA(1:6*nc,1:nc) ,[6*nc*nc,1]); |
ra = reshape(g.rA(1:6*nc,1:nc) ,[6*nc*nc,1]); |
45 |
rAs = reshape(g.rAs(1:6*nc,1:nc) ,[6*nc*nc,1]); |
rAs = reshape(g.rAs(1:6*nc,1:nc) ,[6*nc*nc,1]); |
46 |
rAw = reshape(g.rAw(1:6*nc,1:nc) ,[6*nc*nc,1]); |
rAw = reshape(g.rAw(1:6*nc,1:nc) ,[6*nc*nc,1]); |
47 |
%dxc = reshape(g.dxC(1:6*nc,1:nc),[6*nc*nc,1]); |
dxc = reshape(g.dxC(1:6*nc,1:nc),[6*nc*nc,1]); |
48 |
%dyc = reshape(g.dyC(1:6*nc,1:nc),[6*nc*nc,1]); |
dyc = reshape(g.dyC(1:6*nc,1:nc),[6*nc*nc,1]); |
49 |
%dxg = reshape(g.dxG(1:6*nc,1:nc),[6*nc*nc,1]); |
dxg = reshape(g.dxG(1:6*nc,1:nc),[6*nc*nc,1]); |
50 |
%dyg = reshape(g.dyG(1:6*nc,1:nc),[6*nc*nc,1]); |
dyg = reshape(g.dyG(1:6*nc,1:nc),[6*nc*nc,1]); |
51 |
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%rAw=dxc.*dyg; |
%rAw=dxc.*dyg; |
53 |
%rAs=dyc.*dxg; |
%rAs=dyc.*dxg; |
56 |
mw=ceil(hw); mw=min(1,mw); |
mw=ceil(hw); mw=min(1,mw); |
57 |
ms=ceil(hs); ms=min(1,ms); |
ms=ceil(hs); ms=min(1,ms); |
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59 |
%hw(find(hw==0))=Inf; |
hw(find(hw==0))=Inf; |
60 |
%hs(find(hs==0))=Inf; |
hs(find(hs==0))=Inf; |
61 |
%hw_recip=1./hw; %hw_recip(find(hw==0))=0; |
hw_recip=1./hw; %hw_recip(find(hw==0))=0; |
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%hs_recip=1./hs; %hs_recip(find(hs==0))=0; |
hs_recip=1./hs; %hs_recip(find(hs==0))=0; |
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64 |
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ub_all = zeros(6*nc,nc,nr,nt); |
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vb_all = zeros(6*nc,nc,nr,nt); |
66 |
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wb_all = zeros(6*nc,nc,nr,nt); |
67 |
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68 |
switch GMform |
switch GMform |
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121 |
ub = reshape(ub./(rAw*dr),[6*nc,nc,nr]); |
ub = reshape(ub./(rAw*dr),[6*nc,nc,nr]); |
122 |
% vb = reshape(hs_recip.*vb./(rAs*dr),[6*nc,nc,nr]); |
% vb = reshape(hs_recip.*vb./(rAs*dr),[6*nc,nc,nr]); |
123 |
vb = reshape(vb./(rAs*dr),[6*nc,nc,nr]); |
vb = reshape(vb./(rAs*dr),[6*nc,nc,nr]); |
124 |
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125 |
ub_all(:,:,:,it) = ub; |
ub_all(:,:,:,it) = ub; |
126 |
vb_all(:,:,:,it) = vb; |
vb_all(:,:,:,it) = vb; |
127 |
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128 |
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%%%%%%%%%%%%% |
129 |
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[u6t,v6t] =split_UV_cub(ub,vb,0,1); |
130 |
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[hw6t,hs6t]=split_UV_cub(reshape(hw,6*nc,nc,nr),reshape(hs,6*nc,nc,nr),0,1); |
131 |
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[dy6t,dx6t]=split_UV_cub(reshape(dyg,6*nc,nc),reshape(dxg,6*nc,nc),0,1); |
132 |
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133 |
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%F6tX = u6t.*hw6t.*permute(repmat(dy6t,[1 1 1 nr]),[1 2 4 3]); |
134 |
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%F6tY = v6t.*hs6t.*permute(repmat(dx6t,[1 1 1 nr]),[1 2 4 3]); |
135 |
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F6tX = u6t.*permute(repmat(dy6t,[1 1 1 nr]),[1 2 4 3]); |
136 |
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F6tY = v6t.*permute(repmat(dx6t,[1 1 1 nr]),[1 2 4 3]); |
137 |
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138 |
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Hdiv = zeros(nc,nc,nr,6); |
139 |
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Hdiv = F6tX([2:nc+1],:,:,:) - F6tX([1:nc],:,:,:) ... |
140 |
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+ F6tY(:,[2:nc+1],:,:) - F6tY(:,[1:nc],:,:); |
141 |
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for k=1:nr |
142 |
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Hdiv(:,:,k,:) = -Hdiv(:,:,k,:)*dr(k); |
143 |
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end |
144 |
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145 |
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%psiX = zeros(6*nc,nc,nr); |
146 |
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%for n = 1:6 |
147 |
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% is = 1+nc*(n-1);ie=nc*n; |
148 |
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% psiX([is:ie],[1:nc],[1:nr]) = Hdiv([1:nc],[1:nc],[1:nr],n); |
149 |
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%end |
150 |
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psiX = reshape(permute(Hdiv,[1 4 2 3]),6*nc,nc,nr); |
151 |
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%wb = psiX ./ repmat(reshape(ra,6*nc,nc),[1 1 nr]); |
152 |
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153 |
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wb = zeros(6*nc,nc,nr+1); |
154 |
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for k=nr:-1:1 |
155 |
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wb(:,:,k)= psiX(:,:,k) ./ reshape(ra,6*nc,nc) + wb(:,:,k+1); |
156 |
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end |
157 |
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158 |
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wb_all(:,:,:,it) = wb(:,:,1:30); |
159 |
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%%%%%%%%%%%% |
160 |
end |
end |
161 |
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162 |
%%%%%%% Advective form case |
%%%%%%% Advective form case |
197 |
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198 |
ub = ub_all; |
ub = ub_all; |
199 |
vb = vb_all; |
vb = vb_all; |
200 |
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wb = wb_all; |