#!/bin/bash

echo -n "Would you like to use default settings? (y/n): "
read yn

if echo $yn | grep -q n 
then

  rm .darwinview/filenames
  rm .darwinview/*.dat

  echo -n "Please enter screen resolution: "
  read win
  echo $win > .darwinview/config
  echo -n "Please enter dimensions of data: "
  read dim
  echo $dim >> .darwinview/config
  echo -n "Please enter dimensions of data sets: "
  read dimset
  echo $dimset >> .darwinview/config
  echo .darwinview/filenames >> .darwinview/config
  echo -n "Please enter directory containing data: "
  read dir

  name="start"

  while [ $name != 'q' ] 
  do
   echo -n "Please enter name of species: "
   read name
   if [ $name != 'q' ]
   then
    echo .darwinview/$name.dat >> .darwinview/filenames 
    for i in `ls $dir`
    do
     touch .darwinview/$name.dat
     echo $dir/$i/`ls $dir/$i | grep $name` >> .darwinview/$name.dat
    done
   fi
  done

fi

make
./a.out