| 1 |
jahn |
1.1 |
C $Name: $ |
| 2 |
|
|
|
| 3 |
|
|
#include "CPP_OPTIONS.h" |
| 4 |
|
|
#include "DARWIN_OPTIONS.h" |
| 5 |
|
|
|
| 6 |
|
|
#ifdef ALLOW_PTRACERS |
| 7 |
|
|
#ifdef ALLOW_DARWIN |
| 8 |
|
|
#ifdef ALLOW_QUOTA |
| 9 |
|
|
|
| 10 |
|
|
c ========================================================== |
| 11 |
|
|
c SUBROUTINE QUOTA_INIT_VARI() |
| 12 |
|
|
c initialize stuff for generalized quota plankton model |
| 13 |
|
|
c adapted from NPZD2Fe - Mick Follows, Fall 2005 |
| 14 |
|
|
c modified - Stephanie Dutkiewicz, Spring 2006 |
| 15 |
|
|
c modified - Ben Ward, 2009/2010 |
| 16 |
|
|
c ========================================================== |
| 17 |
|
|
c |
| 18 |
|
|
SUBROUTINE QUOTA_INIT_VARI(myThid) |
| 19 |
|
|
|
| 20 |
|
|
IMPLICIT NONE |
| 21 |
|
|
|
| 22 |
|
|
#include "SIZE.h" |
| 23 |
|
|
#include "GRID.h" |
| 24 |
|
|
#include "DYNVARS.h" |
| 25 |
|
|
#include "EEPARAMS.h" |
| 26 |
|
|
#include "PARAMS.h" |
| 27 |
|
|
#include "QUOTA_SIZE.h" |
| 28 |
|
|
#include "QUOTA.h" |
| 29 |
|
|
c#include "GCHEM.h" |
| 30 |
|
|
#include "DARWIN_IO.h" |
| 31 |
|
|
|
| 32 |
|
|
C !INPUT PARAMETERS: =================================================== |
| 33 |
|
|
C myThid :: thread number |
| 34 |
|
|
INTEGER myThid |
| 35 |
|
|
|
| 36 |
|
|
C === Functions === |
| 37 |
|
|
_RL DARWIN_RANDOM |
| 38 |
|
|
EXTERNAL DARWIN_RANDOM |
| 39 |
|
|
|
| 40 |
|
|
C !LOCAL VARIABLES: |
| 41 |
|
|
C === Local variables === |
| 42 |
|
|
C msgBuf - Informational/error meesage buffer |
| 43 |
|
|
CHARACTER*(MAX_LEN_MBUF) msgBuf |
| 44 |
|
|
CHARACTER*(MAX_LEN_MBUF) char_str |
| 45 |
|
|
INTEGER char_n |
| 46 |
|
|
INTEGER IniUnit1, IniUnit2, IniUnit3, IniUnit4, IniUnit5 |
| 47 |
|
|
|
| 48 |
|
|
INTEGER bi, bj, k, i, j, iPAR |
| 49 |
|
|
INTEGER ii,io,jp,jp2,ko |
| 50 |
|
|
_RL pday |
| 51 |
|
|
c length of day (seconds) |
| 52 |
|
|
pday = 86400.0 _d 0 |
| 53 |
|
|
CEOP |
| 54 |
|
|
|
| 55 |
|
|
WRITE(msgBuf,'(A)') |
| 56 |
|
|
& '// =======================================================' |
| 57 |
|
|
CALL PRINT_MESSAGE( msgBuf, standardMessageUnit, |
| 58 |
|
|
& SQUEEZE_RIGHT, myThid ) |
| 59 |
|
|
WRITE(msgBuf,'(A)') '// Quota init variables >>> START <<<' |
| 60 |
|
|
CALL PRINT_MESSAGE( msgBuf, standardMessageUnit, |
| 61 |
|
|
& SQUEEZE_RIGHT, myThid ) |
| 62 |
|
|
WRITE(msgBuf,'(A)') |
| 63 |
|
|
& '// =======================================================' |
| 64 |
|
|
CALL PRINT_MESSAGE( msgBuf, standardMessageUnit, |
| 65 |
|
|
& SQUEEZE_RIGHT, myThid ) |
| 66 |
|
|
|
| 67 |
|
|
c test.................... |
| 68 |
|
|
c write(6,*)'testing in npzd2fe_init_vari ' |
| 69 |
|
|
c test.................... |
| 70 |
|
|
|
| 71 |
|
|
|
| 72 |
|
|
c set up ecosystem coefficients |
| 73 |
|
|
c |
| 74 |
|
|
|
| 75 |
|
|
c initialize total number of functional groups tried |
| 76 |
|
|
ngroups = 0 |
| 77 |
|
|
CALL quota_generate_phyto(MyThid) |
| 78 |
|
|
c %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 79 |
|
|
|
| 80 |
|
|
c %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 81 |
|
|
c %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 82 |
|
|
c write out initial plankton and organic matter characteristics |
| 83 |
|
|
CALL MDSFINDUNIT( IniUnit1, mythid ) |
| 84 |
|
|
open(IniUnit1,file='plankton-ini-char.dat',status='unknown') |
| 85 |
|
|
CALL MDSFINDUNIT( IniUnit2, mythid ) |
| 86 |
|
|
open(IniUnit2,file='plankton_ini_char_nohead.dat', |
| 87 |
|
|
& status='unknown') |
| 88 |
|
|
c----------------------------------------------- |
| 89 |
|
|
char_str=' pft bio_vol qcarbon' |
| 90 |
|
|
& //' biosink bioswim mortality' |
| 91 |
|
|
& //' respiration autotrophy pp_opt' |
| 92 |
|
|
char_n=108 |
| 93 |
|
|
c loop elements |
| 94 |
|
|
do ii=1,iimax |
| 95 |
|
|
WRITE(msgBuf,'(I1)'),ii |
| 96 |
|
|
char_str=char_str(1:char_n)//' vmaxi_'//msgBuf(1:1) |
| 97 |
|
|
char_n=char_n+12 |
| 98 |
|
|
enddo |
| 99 |
|
|
do ii=2,iimax ! skip carbon |
| 100 |
|
|
WRITE(msgBuf,'(I1)'),ii |
| 101 |
|
|
char_str=char_str(1:char_n)//' kn_'//msgBuf(1:1) |
| 102 |
|
|
char_n=char_n+12 |
| 103 |
|
|
enddo |
| 104 |
|
|
c loop quotas |
| 105 |
|
|
do io=2,iomax-iChl ! skip carbon |
| 106 |
|
|
WRITE(msgBuf,'(I1)'),io |
| 107 |
|
|
char_str=char_str(1:char_n)//' qmin_'//msgBuf(1:1) |
| 108 |
|
|
& //' qmax_'//msgBuf(1:1) |
| 109 |
|
|
char_n=char_n+24 |
| 110 |
|
|
enddo |
| 111 |
|
|
do io=1,iomax-iChl |
| 112 |
|
|
WRITE(msgBuf,'(I1)'),io |
| 113 |
|
|
if (io.eq.iCarb.or.io.eq.iNitr.or.io.eq.iPhos) then |
| 114 |
|
|
char_str=char_str(1:char_n)//' excretn_'//msgBuf(1:1) |
| 115 |
|
|
char_n=char_n+12 |
| 116 |
|
|
endif |
| 117 |
|
|
char_str=char_str(1:char_n)//' beta_mort_'//msgBuf(1:1) |
| 118 |
|
|
& //' beta_graz_'//msgBuf(1:1) |
| 119 |
|
|
char_n=char_n+24 |
| 120 |
|
|
enddo |
| 121 |
|
|
c |
| 122 |
|
|
char_str=char_str(1:char_n)//' alphachl' |
| 123 |
|
|
& //' maxgraz k_graz' |
| 124 |
|
|
char_n=char_n+36 |
| 125 |
|
|
write(IniUnit1,'(A)'),char_str(1:char_n) |
| 126 |
|
|
c----------------------------------------------- |
| 127 |
|
|
do jp = 1, npmax |
| 128 |
|
|
write(msgBuf,120)float(pft(jp)),biovol(jp),qcarbon(jp), |
| 129 |
|
|
& biosink(jp)*pday,bioswim(jp)*pday,kmort(jp)*pday, |
| 130 |
|
|
& respiration(jp)*pday,autotrophy(jp),pp_opt(jp) |
| 131 |
|
|
char_str=msgBuf |
| 132 |
|
|
char_n=108 |
| 133 |
|
|
c loop elements |
| 134 |
|
|
do ii=1,iimax |
| 135 |
|
|
write(msgBuf,111)vmaxi(ii,jp)*pday |
| 136 |
|
|
char_str=char_str(1:char_n)//msgBuf |
| 137 |
|
|
char_n=char_n+12 |
| 138 |
|
|
enddo |
| 139 |
|
|
do ii=2,iimax ! skip carbon |
| 140 |
|
|
write(msgBuf,111)kn(ii,jp) |
| 141 |
|
|
char_str=char_str(1:char_n)//msgBuf |
| 142 |
|
|
char_n=char_n+12 |
| 143 |
|
|
enddo |
| 144 |
|
|
c loop quotas |
| 145 |
|
|
do io=2,iomax-iChl ! skip carbon |
| 146 |
|
|
write(msgBuf,112)qmin(io,jp),qmax(io,jp) |
| 147 |
|
|
char_str=char_str(1:char_n)//msgBuf |
| 148 |
|
|
char_n=char_n+24 |
| 149 |
|
|
enddo |
| 150 |
|
|
do io=1,iomax-iChl |
| 151 |
|
|
if (io.eq.iCarb.or.io.eq.iNitr.or.io.eq.iPhos) then |
| 152 |
|
|
write(msgBuf,111)kexc(io,jp)*pday |
| 153 |
|
|
char_str=char_str(1:char_n)//msgBuf |
| 154 |
|
|
char_n=char_n+12 |
| 155 |
|
|
endif |
| 156 |
|
|
write(msgBuf,112)beta_mort(io,jp),beta_graz(io,jp) |
| 157 |
|
|
char_str=char_str(1:char_n)//msgBuf |
| 158 |
|
|
char_n=char_n+24 |
| 159 |
|
|
enddo |
| 160 |
|
|
write(msgBuf,113)alphachl(jp), |
| 161 |
|
|
& graz(jp)*pday,kg(jp) |
| 162 |
|
|
char_str=char_str(1:char_n)//msgBuf |
| 163 |
|
|
char_n=char_n+36 |
| 164 |
|
|
c----------------------------------------------- |
| 165 |
|
|
write(IniUnit1,'(A)')char_str(1:char_n) |
| 166 |
|
|
write(IniUnit2,'(A)')char_str(1:char_n) |
| 167 |
|
|
enddo |
| 168 |
|
|
c<><><><><><><><><><><><><><><><><><><><><><><><><><> |
| 169 |
|
|
close(IniUnit2) |
| 170 |
|
|
close(IniUnit1) |
| 171 |
|
|
c----------------------------------------------- |
| 172 |
|
|
c write out grazing max rate and half sat matrices |
| 173 |
|
|
CALL MDSFINDUNIT( IniUnit3, mythid ) |
| 174 |
|
|
open(IniUnit3,file='plankton-grazing.dat',status='unknown') |
| 175 |
|
|
! max ingestion rates |
| 176 |
|
|
do jp=1,npmax |
| 177 |
|
|
char_n=0 |
| 178 |
|
|
do jp2=1,npmax |
| 179 |
|
|
write(msgBuf,'(e9.3)')graz(jp)*pday |
| 180 |
|
|
char_str=char_str(1:char_n)//msgBuf(1:10) |
| 181 |
|
|
char_n=char_n+10 |
| 182 |
|
|
enddo |
| 183 |
|
|
write(IniUnit3,'(A)')char_str(1:char_n) |
| 184 |
|
|
enddo |
| 185 |
|
|
char_n=0 |
| 186 |
|
|
do jp2=1,npmax |
| 187 |
|
|
char_str=char_str(1:char_n)//'----------' |
| 188 |
|
|
char_n=char_n+10 |
| 189 |
|
|
enddo |
| 190 |
|
|
write(IniUnit3,'(A)')char_str(1:char_n) |
| 191 |
|
|
! 1/2-saturations |
| 192 |
|
|
do jp=1,npmax |
| 193 |
|
|
char_n=0 |
| 194 |
|
|
do jp2=1,npmax |
| 195 |
|
|
write(msgBuf,'(e9.3)')kg(jp) |
| 196 |
|
|
char_str=char_str(1:char_n)//msgBuf(1:10) |
| 197 |
|
|
char_n=char_n+10 |
| 198 |
|
|
enddo |
| 199 |
|
|
write(IniUnit3,'(A)')char_str(1:char_n) |
| 200 |
|
|
enddo |
| 201 |
|
|
char_n=0 |
| 202 |
|
|
do jp2=1,npmax |
| 203 |
|
|
char_str=char_str(1:char_n)//'----------' |
| 204 |
|
|
char_n=char_n+10 |
| 205 |
|
|
enddo |
| 206 |
|
|
write(IniUnit3,'(A)')char_str(1:char_n) |
| 207 |
|
|
! predator prey-preference |
| 208 |
|
|
do jp=1,npmax |
| 209 |
|
|
char_n=0 |
| 210 |
|
|
do jp2=1,npmax |
| 211 |
|
|
write(msgBuf,'(e9.3)')graz_pref(jp,jp2) |
| 212 |
|
|
char_str=char_str(1:char_n)//msgBuf(1:10) |
| 213 |
|
|
char_n=char_n+10 |
| 214 |
|
|
enddo |
| 215 |
|
|
write(IniUnit3,'(A)')char_str(1:char_n) |
| 216 |
|
|
enddo |
| 217 |
|
|
c<><><><><><><><><><><><><><><><><><><><><><><><><><> |
| 218 |
|
|
close(IniUnit3) |
| 219 |
|
|
c----------------------------------------------- |
| 220 |
|
|
c write out organic matter remineralisation rates |
| 221 |
|
|
CALL MDSFINDUNIT( IniUnit3, mythid ) |
| 222 |
|
|
open(IniUnit4,file='plankton-orgmat.dat',status='unknown') |
| 223 |
|
|
! DOM remineralisation rates |
| 224 |
|
|
char_n=0 |
| 225 |
|
|
do io=1,iomax-iChl |
| 226 |
|
|
if (io.ne.iSili) then |
| 227 |
|
|
write(msgBuf,'(e9.3)')remin(io,1)*pday |
| 228 |
|
|
char_str=char_str(1:char_n)//msgBuf(1:10) |
| 229 |
|
|
endif |
| 230 |
|
|
char_n=char_n+10 |
| 231 |
|
|
enddo |
| 232 |
|
|
write(IniUnit4,'(A)')char_str(1:char_n) |
| 233 |
|
|
! POM remineralisation rates |
| 234 |
|
|
char_n=0 |
| 235 |
|
|
do io=1,iomax-iChl |
| 236 |
|
|
write(msgBuf,'(e9.3)')remin(io,2)*pday |
| 237 |
|
|
char_str=char_str(1:char_n)//msgBuf(1:10) |
| 238 |
|
|
char_n=char_n+10 |
| 239 |
|
|
enddo |
| 240 |
|
|
write(IniUnit4,'(A)')char_str(1:char_n) |
| 241 |
|
|
c<><><><><><><><><><><><><><><><><><><><><><><><><><> |
| 242 |
|
|
close(IniUnit4) |
| 243 |
|
|
c----------------------------------------------- |
| 244 |
|
|
111 format(1e12.4) |
| 245 |
|
|
112 format(2e12.4) |
| 246 |
|
|
113 format(3e12.4) |
| 247 |
|
|
114 format(4e12.4) |
| 248 |
|
|
115 format(5e12.4) |
| 249 |
|
|
116 format(6e12.4) |
| 250 |
|
|
118 format(8e12.4) |
| 251 |
|
|
120 format(10e12.4) |
| 252 |
|
|
c %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 253 |
|
|
c %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% |
| 254 |
|
|
CALL LEF_ZERO( inputFe,myThid ) |
| 255 |
|
|
CALL LEF_ZERO( sur_par,myThid ) |
| 256 |
|
|
#ifdef NUT_SUPPLY |
| 257 |
|
|
DO bj = myByLo(myThid), myByHi(myThid) |
| 258 |
|
|
DO bi = myBxLo(myThid), myBxHi(myThid) |
| 259 |
|
|
DO j=1-Oly,sNy+Oly |
| 260 |
|
|
DO i=1-Olx,sNx+Olx |
| 261 |
|
|
DO k=1,nR |
| 262 |
|
|
nut_wvel(i,j,k,bi,bj) = 0. _d 0 |
| 263 |
|
|
ENDDO |
| 264 |
|
|
ENDDO |
| 265 |
|
|
ENDDO |
| 266 |
|
|
ENDDO |
| 267 |
|
|
ENDDO |
| 268 |
|
|
#endif |
| 269 |
|
|
|
| 270 |
|
|
#ifdef ALLOW_PAR_DAY |
| 271 |
|
|
DO iPAR=1,2 |
| 272 |
|
|
DO bj=myByLo(myThid), myByHi(myThid) |
| 273 |
|
|
DO bi=myBxLo(myThid), myBxHi(myThid) |
| 274 |
|
|
DO k=1,nR |
| 275 |
|
|
DO j=1-Oly,sNy+Oly |
| 276 |
|
|
DO i=1-Olx,sNx+Olx |
| 277 |
|
|
PARday(i,j,k,bi,bj,iPAR) = 0. _d 0 |
| 278 |
|
|
ENDDO |
| 279 |
|
|
ENDDO |
| 280 |
|
|
ENDDO |
| 281 |
|
|
ENDDO |
| 282 |
|
|
ENDDO |
| 283 |
|
|
ENDDO |
| 284 |
|
|
IF ( .NOT. ( startTime .EQ. baseTime .AND. nIter0 .EQ. 0 |
| 285 |
|
|
& .AND. pickupSuff .EQ. ' ') ) THEN |
| 286 |
|
|
COJ should probably initialize from a file when nIter0 .EQ. 0 |
| 287 |
|
|
CALL DARWIN_READ_PICKUP( nIter0, myThid ) |
| 288 |
|
|
ENDIF |
| 289 |
|
|
#endif |
| 290 |
|
|
c |
| 291 |
|
|
#ifdef ALLOW_TIMEAVE |
| 292 |
|
|
c set arrays to zero if first timestep |
| 293 |
|
|
DO bj = myByLo(myThid), myByHi(myThid) |
| 294 |
|
|
DO bi = myBxLo(myThid), myBxHi(myThid) |
| 295 |
|
|
CALL TIMEAVE_RESET(PARave, Nr, bi, bj, myThid) |
| 296 |
|
|
CALL TIMEAVE_RESET(PPave, Nr, bi, bj, myThid) |
| 297 |
|
|
#ifdef DAR_DIAG_DIVER |
| 298 |
|
|
CALL TIMEAVE_RESET(Diver1ave, Nr, bi, bj, myThid) |
| 299 |
|
|
CALL TIMEAVE_RESET(Diver2ave, Nr, bi, bj, myThid) |
| 300 |
|
|
CALL TIMEAVE_RESET(Diver3ave, Nr, bi, bj, myThid) |
| 301 |
|
|
CALL TIMEAVE_RESET(Diver4ave, Nr, bi, bj, myThid) |
| 302 |
|
|
#endif |
| 303 |
|
|
c CALL TIMEAVE_RESET(SURave, 1, bi, bj, myThid) |
| 304 |
|
|
WRITE(msgbuf,'(A)') |
| 305 |
|
|
& 'QQ start timeave' |
| 306 |
|
|
CALL PRINT_MESSAGE( msgBuf, standardMessageUnit, |
| 307 |
|
|
& SQUEEZE_RIGHT , mythid) |
| 308 |
|
|
|
| 309 |
|
|
do k=1,Nr |
| 310 |
|
|
DAR_TimeAve(bi,bj,k)=0. _d 0 |
| 311 |
|
|
enddo |
| 312 |
|
|
ENDDO |
| 313 |
|
|
ENDDO |
| 314 |
|
|
#endif /* ALLOW_TIMEAVE */ |
| 315 |
|
|
|
| 316 |
|
|
#ifdef CHECK_CONS |
| 317 |
|
|
coj find unused units for darwin_cons output |
| 318 |
|
|
CALL MDSFINDUNIT( DAR_cons_unit1, mythid ) |
| 319 |
|
|
open(DAR_cons_unit1,file='darwin_cons_C.txt',status='unknown') |
| 320 |
|
|
CALL MDSFINDUNIT( DAR_cons_unit2, mythid ) |
| 321 |
|
|
open(DAR_cons_unit2,file='darwin_cons_N.txt',status='unknown') |
| 322 |
|
|
#endif |
| 323 |
|
|
|
| 324 |
|
|
c test.................... |
| 325 |
|
|
c write(6,*)'finishing darwin_init_vari ' |
| 326 |
|
|
c test.................... |
| 327 |
|
|
WRITE(msgBuf,'(A)') |
| 328 |
|
|
& '// =======================================================' |
| 329 |
|
|
CALL PRINT_MESSAGE( msgBuf, standardMessageUnit, |
| 330 |
|
|
& SQUEEZE_RIGHT, myThid ) |
| 331 |
|
|
WRITE(msgBuf,'(A)') '// Darwin init variables >>> END <<<' |
| 332 |
|
|
CALL PRINT_MESSAGE( msgBuf, standardMessageUnit, |
| 333 |
|
|
& SQUEEZE_RIGHT, myThid ) |
| 334 |
|
|
WRITE(msgBuf,'(A)') |
| 335 |
|
|
& '// =======================================================' |
| 336 |
|
|
CALL PRINT_MESSAGE( msgBuf, standardMessageUnit, |
| 337 |
|
|
& SQUEEZE_RIGHT, myThid ) |
| 338 |
|
|
|
| 339 |
|
|
RETURN |
| 340 |
|
|
END |
| 341 |
|
|
#endif /*ALLOW_QUOTA*/ |
| 342 |
|
|
#endif /*ALLOW_DARWIN*/ |
| 343 |
|
|
#endif /*ALLOW_PTRACERS*/ |
| 344 |
|
|
c ========================================================== |
| 345 |
|
|
|
Parent Directory
| 
Revision Log
| 
Revision Graph