--- MITgcm_contrib/darwin2/pkg/monod/MONOD.h	2011/11/09 23:34:17	1.4
+++ MITgcm_contrib/darwin2/pkg/monod/MONOD.h	2014/05/01 16:19:32	1.7
@@ -1,4 +1,4 @@
-C $Header: /home/ubuntu/mnt/e9_copy/MITgcm_contrib/darwin2/pkg/monod/MONOD.h,v 1.4 2011/11/09 23:34:17 jahn Exp $
+C $Header: /home/ubuntu/mnt/e9_copy/MITgcm_contrib/darwin2/pkg/monod/MONOD.h,v 1.7 2014/05/01 16:19:32 jahn Exp $
 C $Name:  $
 
 c MONOD.h
@@ -36,6 +36,9 @@
          COMMON/darwin_ecoparam/mu,ksatPO4,ksatNO3,ksatNO2,ksatNH4,
      &          ksatSi,ksatFeT,ksatPAR,
      &          mortzoo,wsink,R_NP,R_FeP,R_SiP,R_PC,R_PICPOC, physize,
+#ifdef FIX_ZOO_QUOTAS
+     &          R_NP_zoo,R_FeP_zoo,R_SiP_zoo,R_PC_zoo,
+#endif
      &          diacoc,diazotroph,zoosize,ExportFracZ,
      &          Kpremin_P, Kpremin_N, Kpremin_Fe, Kpremin_Si,
      &          sig1,sig2,sig3,
@@ -60,7 +63,7 @@
      &          SmallPsatrange, BigPsatrange, ProcPsatrange,
      &          prochlPsat,
      &          UniDzPsat, UniDzPsatrange, 
-     &          depthdenit, o2crit, denit_np,
+     &          depthdenit, o2crit, denit_np, denit_no3, no3crit,
 #ifdef OLD_GRAZE
      &          graze,
      &          kgrazesat,
@@ -81,6 +84,9 @@
      &          val_R_SiP_diatom, val_R_NP_diaz, val_RFeP_diaz,
      &          val_R_NP, val_RFeP, val_R_PC,
      &          val_R_PICPOC,
+#ifdef FIX_ZOO_QUOTAS
+     &          val_R_NP_zoo, val_RFeP_zoo, val_R_SiP_zoo, val_R_PC_zoo,
+#endif
      &          ksatNH4fac, ksatNO2fac, val_ksatsi,
      &          ngrowfac, ilight,
      &          phymin, PAR0, diaz_growfac,
@@ -92,6 +98,11 @@
 #ifdef PART_SCAV
      &         ,scav_rat, scav_inter, scav_exp
 #endif
+#ifdef ALLOW_CDOM
+     &         , fraccdom, cdomdegrd, cdombleach, PARcdom
+     &         , rnp_cdom, rfep_cdom, rcp_cdom
+     &         , cdomcoeff
+#endif
      &         ,nsource,ngroups
     
          _RL mu(npmax)
@@ -110,6 +121,12 @@
          _RL R_SiP(npmax)
          _RL R_PC(npmax)
          _RL R_PICPOC(npmax)
+#ifdef FIX_ZOO_QUOTAS
+         _RL R_NP_zoo(nzmax)
+         _RL R_FeP_zoo(nzmax)
+         _RL R_SiP_zoo(nzmax)
+         _RL R_PC_zoo(nzmax)
+#endif
          _RL physize(npmax)
          _RL diacoc(npmax)
          _RL diazotroph(npmax)
@@ -149,7 +166,8 @@
          _RL UniDzPsat, UniDzPsatrange
          _RL depthdenit
          _RL o2crit
-         _RL denit_np
+         _RL denit_np, denit_no3
+         _RL no3crit
          _RL ksatNH4fac, ksatNO2fac
          _RL sig1,sig2,sig3
          _RL val_ksatsi
@@ -174,6 +192,9 @@
          _RL ZoomortSmall2, ZoomortBig2
          _RL val_R_SiP_diatom, val_R_NP_diaz, val_RFeP_diaz,
      &          val_R_NP, val_RFeP, val_R_PC, val_R_PICPOC
+#ifdef FIX_ZOO_QUOTAS
+         _RL val_R_SiP_zoo, val_R_NP_zoo, val_RFeP_zoo, val_R_PC_zoo
+#endif
          _RL ngrowfac,ilight
          _RL phymin
          _RL PAR0
@@ -187,7 +208,11 @@
 #ifdef PART_SCAV
          _RL scav_rat, scav_inter, scav_exp
 #endif
-
+#ifdef ALLOW_CDOM
+         _RL fraccdom, cdomdegrd, cdombleach, PARcdom
+         _RL rnp_cdom, rfep_cdom, rcp_cdom
+         _RL cdomcoeff
+#endif
          INTEGER nsource(npmax)
          INTEGER ngroups