/[MITgcm]/MITgcm_contrib/darwin2/pkg/monod/MONOD.h
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revision 1.2 by stephd, Wed Oct 5 20:37:22 2011 UTC revision 1.4 by jahn, Wed Nov 9 23:34:17 2011 UTC
# Line 17  c ksat = half sat coeff, phyto specific Line 17  c ksat = half sat coeff, phyto specific
17  c ksatlight = half sat coeff wrt light, phyto specific  c ksatlight = half sat coeff wrt light, phyto specific
18  c graze = grazing rate, phyto specific for each zooplankton  c graze = grazing rate, phyto specific for each zooplankton
19  c mortzoo = mortality rate for each zooplankton  c mortzoo = mortality rate for each zooplankton
20    c mortzoo2 = quadratic mortality rate for each zooplankton
21  c wsink = sinking speed, phyto specific  c wsink = sinking speed, phyto specific
22  c R_XY = stoichiometric ratios of nutrients in phytoplankton  c R_XY = stoichiometric ratios of nutrients in phytoplankton
23  c        specific to each functional group, relative to Phos  c        specific to each functional group, relative to Phos
# Line 43  c           have been tried Line 44  c           have been tried
44       &          zooTempCoeff, zooTempExp, zooTempOptimum, kinhib,       &          zooTempCoeff, zooTempExp, zooTempOptimum, kinhib,
45       &          diatomgraz, coccograz, olargegraz,       &          diatomgraz, coccograz, olargegraz,
46       &          mortphy, ExportFracP,       &          mortphy, ExportFracP,
47         &          mortzoo2,
48       &          Smallgrow, Biggrow, Smallmort, Bigmort,       &          Smallgrow, Biggrow, Smallmort, Bigmort,
49       &          Smallgrowrange, Biggrowrange, Smallmortrange,       &          Smallgrowrange, Biggrowrange, Smallmortrange,
50       &          Bigmortrange,       &          Bigmortrange,
# Line 75  c           have been tried Line 77  c           have been tried
77       &          hollexp,       &          hollexp,
78  #endif  #endif
79       &          ZoomortSmall, ZoomortBig, ZooexfacSmall, ZooexfacBig,       &          ZoomortSmall, ZoomortBig, ZooexfacSmall, ZooexfacBig,
80         &          ZoomortSmall2, ZoomortBig2,
81       &          val_R_SiP_diatom, val_R_NP_diaz, val_RFeP_diaz,       &          val_R_SiP_diatom, val_R_NP_diaz, val_RFeP_diaz,
82       &          val_R_NP, val_RFeP, val_R_PC,       &          val_R_NP, val_RFeP, val_R_PC,
83       &          val_R_PICPOC,       &          val_R_PICPOC,
# Line 100  c           have been tried Line 103  c           have been tried
103           _RL ksatFeT(npmax)           _RL ksatFeT(npmax)
104           _RL ksatPAR(npmax)           _RL ksatPAR(npmax)
105           _RL mortzoo(nzmax)           _RL mortzoo(nzmax)
106             _RL mortzoo2(nzmax)
107           _RL wsink(npmax)           _RL wsink(npmax)
108           _RL R_NP(npmax)           _RL R_NP(npmax)
109           _RL R_FeP(npmax)           _RL R_FeP(npmax)
# Line 167  c           have been tried Line 171  c           have been tried
171           _RL hollexp           _RL hollexp
172  #endif  #endif
173           _RL ZoomortSmall, ZoomortBig, ZooexfacSmall, ZooexfacBig           _RL ZoomortSmall, ZoomortBig, ZooexfacSmall, ZooexfacBig
174             _RL ZoomortSmall2, ZoomortBig2
175           _RL val_R_SiP_diatom, val_R_NP_diaz, val_RFeP_diaz,           _RL val_R_SiP_diatom, val_R_NP_diaz, val_RFeP_diaz,
176       &          val_R_NP, val_RFeP, val_R_PC, val_R_PICPOC       &          val_R_NP, val_RFeP, val_R_PC, val_R_PICPOC
177           _RL ngrowfac,ilight           _RL ngrowfac,ilight
# Line 216  c    istar          - photoadaptation li Line 221  c    istar          - photoadaptation li
221           COMMON/darwin_diags_param/           COMMON/darwin_diags_param/
222       &          diver_thresh0, diver_thresh1,       &          diver_thresh0, diver_thresh1,
223       &          diver_thresh2, diver_thresh3,       &          diver_thresh2, diver_thresh3,
224       &          diver_thresh4       &          diver_thresh4, shannon_thresh
225    
226           _RL diver_thresh0, diver_thresh1           _RL diver_thresh0, diver_thresh1
227           _RL diver_thresh2, diver_thresh3           _RL diver_thresh2, diver_thresh3
228           _RL diver_thresh4           _RL diver_thresh4, shannon_thresh
229    
230  #ifdef GEIDER  #ifdef GEIDER
231  c ANNA geider by mQyield instead of alpha  c ANNA geider by mQyield instead of alpha
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