/[MITgcm]/MITgcm_contrib/darwin2/pkg/monod/MONOD.h
ViewVC logotype

Diff of /MITgcm_contrib/darwin2/pkg/monod/MONOD.h

Parent Directory Parent Directory | Revision Log Revision Log | View Revision Graph Revision Graph | View Patch Patch

revision 1.1 by jahn, Wed Apr 13 18:56:25 2011 UTC revision 1.5 by stephd, Thu May 31 21:08:25 2012 UTC
# Line 17  c ksat = half sat coeff, phyto specific Line 17  c ksat = half sat coeff, phyto specific
17  c ksatlight = half sat coeff wrt light, phyto specific  c ksatlight = half sat coeff wrt light, phyto specific
18  c graze = grazing rate, phyto specific for each zooplankton  c graze = grazing rate, phyto specific for each zooplankton
19  c mortzoo = mortality rate for each zooplankton  c mortzoo = mortality rate for each zooplankton
20    c mortzoo2 = quadratic mortality rate for each zooplankton
21  c wsink = sinking speed, phyto specific  c wsink = sinking speed, phyto specific
22  c R_XY = stoichiometric ratios of nutrients in phytoplankton  c R_XY = stoichiometric ratios of nutrients in phytoplankton
23  c        specific to each functional group, relative to Phos  c        specific to each functional group, relative to Phos
# Line 43  c           have been tried Line 44  c           have been tried
44       &          zooTempCoeff, zooTempExp, zooTempOptimum, kinhib,       &          zooTempCoeff, zooTempExp, zooTempOptimum, kinhib,
45       &          diatomgraz, coccograz, olargegraz,       &          diatomgraz, coccograz, olargegraz,
46       &          mortphy, ExportFracP,       &          mortphy, ExportFracP,
47         &          mortzoo2,
48       &          Smallgrow, Biggrow, Smallmort, Bigmort,       &          Smallgrow, Biggrow, Smallmort, Bigmort,
49       &          Smallgrowrange, Biggrowrange, Smallmortrange,       &          Smallgrowrange, Biggrowrange, Smallmortrange,
50       &          Bigmortrange,       &          Bigmortrange,
# Line 72  c           have been tried Line 74  c           have been tried
74       &          phygrazmin,       &          phygrazmin,
75       &          ExportFracGraz,       &          ExportFracGraz,
76       &          ExGrazfracbig, ExGrazfracsmall,       &          ExGrazfracbig, ExGrazfracsmall,
77         &          hollexp,
78  #endif  #endif
79       &          ZoomortSmall, ZoomortBig, ZooexfacSmall, ZooexfacBig,       &          ZoomortSmall, ZoomortBig, ZooexfacSmall, ZooexfacBig,
80         &          ZoomortSmall2, ZoomortBig2,
81       &          val_R_SiP_diatom, val_R_NP_diaz, val_RFeP_diaz,       &          val_R_SiP_diatom, val_R_NP_diaz, val_RFeP_diaz,
82       &          val_R_NP, val_RFeP, val_R_PC,       &          val_R_NP, val_RFeP, val_R_PC,
83       &          val_R_PICPOC,       &          val_R_PICPOC,
# Line 88  c           have been tried Line 92  c           have been tried
92  #ifdef PART_SCAV  #ifdef PART_SCAV
93       &         ,scav_rat, scav_inter, scav_exp       &         ,scav_rat, scav_inter, scav_exp
94  #endif  #endif
95    #ifdef ALLOW_CDOM
96         &         , fraccdom, cdomdegrd, cdombleach, PARcdom
97         &         , rnp_cdom, rfep_cdom, rcp_cdom
98         &         , cdomcoeff
99    #endif
100       &         ,nsource,ngroups       &         ,nsource,ngroups
101            
102           _RL mu(npmax)           _RL mu(npmax)
# Line 99  c           have been tried Line 108  c           have been tried
108           _RL ksatFeT(npmax)           _RL ksatFeT(npmax)
109           _RL ksatPAR(npmax)           _RL ksatPAR(npmax)
110           _RL mortzoo(nzmax)           _RL mortzoo(nzmax)
111             _RL mortzoo2(nzmax)
112           _RL wsink(npmax)           _RL wsink(npmax)
113           _RL R_NP(npmax)           _RL R_NP(npmax)
114           _RL R_FeP(npmax)           _RL R_FeP(npmax)
# Line 163  c           have been tried Line 173  c           have been tried
173           _RL phygrazmin           _RL phygrazmin
174           _RL ExportFracGraz(nzmax)           _RL ExportFracGraz(nzmax)
175           _RL ExGrazfracbig, ExGrazfracsmall           _RL ExGrazfracbig, ExGrazfracsmall
176             _RL hollexp
177  #endif  #endif
178           _RL ZoomortSmall, ZoomortBig, ZooexfacSmall, ZooexfacBig           _RL ZoomortSmall, ZoomortBig, ZooexfacSmall, ZooexfacBig
179             _RL ZoomortSmall2, ZoomortBig2
180           _RL val_R_SiP_diatom, val_R_NP_diaz, val_RFeP_diaz,           _RL val_R_SiP_diatom, val_R_NP_diaz, val_RFeP_diaz,
181       &          val_R_NP, val_RFeP, val_R_PC, val_R_PICPOC       &          val_R_NP, val_RFeP, val_R_PC, val_R_PICPOC
182           _RL ngrowfac,ilight           _RL ngrowfac,ilight
# Line 180  c           have been tried Line 192  c           have been tried
192  #ifdef PART_SCAV  #ifdef PART_SCAV
193           _RL scav_rat, scav_inter, scav_exp           _RL scav_rat, scav_inter, scav_exp
194  #endif  #endif
195    #ifdef ALLOW_CDOM
196             _RL fraccdom, cdomdegrd, cdombleach, PARcdom
197             _RL rnp_cdom, rfep_cdom, rcp_cdom
198             _RL cdomcoeff
199    #endif
200           INTEGER nsource(npmax)           INTEGER nsource(npmax)
201           INTEGER ngroups           INTEGER ngroups
202    
# Line 214  c    istar          - photoadaptation li Line 230  c    istar          - photoadaptation li
230           COMMON/darwin_diags_param/           COMMON/darwin_diags_param/
231       &          diver_thresh0, diver_thresh1,       &          diver_thresh0, diver_thresh1,
232       &          diver_thresh2, diver_thresh3,       &          diver_thresh2, diver_thresh3,
233       &          diver_thresh4       &          diver_thresh4, shannon_thresh
234    
235           _RL diver_thresh0, diver_thresh1           _RL diver_thresh0, diver_thresh1
236           _RL diver_thresh2, diver_thresh3           _RL diver_thresh2, diver_thresh3
237           _RL diver_thresh4           _RL diver_thresh4, shannon_thresh
238    
239  #ifdef GEIDER  #ifdef GEIDER
240  c ANNA geider by mQyield instead of alpha  c ANNA geider by mQyield instead of alpha
Legend:
Removed from v.1.1  
changed lines
  Added in v.1.5
  ViewVC Help
Powered by ViewVC 1.1.22