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jahn |
1.7 |
C $Header: /u/gcmpack/MITgcm_contrib/darwin2/pkg/darwin/DARWIN_IO.h,v 1.6 2012/10/23 17:55:30 stephd Exp $ |
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stephd |
1.2 |
C $Name: $ |
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jahn |
1.1 |
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#include "DARWIN_OPTIONS.h" |
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c DARWIN_IO.h |
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c -------------------------------------------------------------------- |
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c Description: input and diagnostic output for DARWIN pkg |
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c Stephanie Dutkiewicz: Spring 2006 |
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c NOTE: additional diagnostics still needed |
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c -------------------------------------------------------------------- |
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C-- COMMON /DARWIN_FILENAMES/ |
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C darwin_iceFile :: file name of seaice fraction |
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C darwin_ironFile :: file name of aeolian iron flux |
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C darwin_PARFile :: file name of Photosynthetically Active Radiation at surface |
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C darwin_nutWVelFile :: file name of nutrient wvel |
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C darwin_waterabsorbFile :: file name of water absorption/scattering spectra |
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C darwin_phytoabsorbFile :: file name of phyto absorption/scattering spectra |
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C darwin_particleabsorbFile :: file name of particle absorption/scattering spectra |
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C darwin_surfacespecFile :: file name of spectrum of incident light |
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C darwin_acdomFile :: file name of CDOM absorption spectrum |
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jahn |
1.3 |
C darwin_PARunits :: units of data in PAR file; one of Ein/m2/d, uEin/m2/s, W/m2 |
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C darwin_PARFileConv :: conversion factor from PAR file units to uEin/m2/s |
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C darwin_W_to_uEins :: conversion factor from W to uEin/s |
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jahn |
1.4 |
C darwin_ironUnits :: units of data in iron file; one of mol Fe/m2/s, kg dust/m2/s |
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C darwin_dustFrac :: fraction of dust by weight that is iron |
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jahn |
1.1 |
C darwin_forcingPeriod :: perioDARWIN forcing parameter specific for DARWIN (seconds) |
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C darwin_forcingCycle :: perioDARWIN forcing parameter specific for DARWIN (seconds) |
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C darwin_seed :: seed for the random number generator |
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COMMON /DARWIN_FILENAMES/ |
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& darwin_iceFile, |
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& darwin_ironFile, |
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& darwin_PARFile, |
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& darwin_nutWVelFile, |
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& darwin_PO4_relaxFile, darwin_NO3_relaxFile, |
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& darwin_FeT_relaxFile, darwin_Si_relaxFile, |
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& darwin_relaxscale, |
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& darwin_PO4_fluxFile, darwin_NO3_FluxFile, |
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& darwin_FeT_fluxFile, darwin_Si_fluxFile, |
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& darwin_oasim_edFile, darwin_oasim_esFile, |
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& darwin_waterabsorbFile, darwin_phytoabsorbFile, |
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& darwin_surfacespecFile, darwin_acdomFile, |
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& darwin_particleabsorbFile, |
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jahn |
1.4 |
& darwin_PARunits, darwin_ironUnits, |
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& darwin_PARFileConv, darwin_ironFileConv, |
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& darwin_dustFrac, |
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jahn |
1.3 |
& darwin_W_to_uEins, |
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jahn |
1.1 |
& darwin_forcingPeriod, darwin_forcingCycle, |
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& darwin_seed |
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CHARACTER*(MAX_LEN_FNAM) darwin_iceFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_ironFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_PARFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_NutWVelFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_PO4_relaxFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_NO3_relaxFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_FeT_relaxFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_Si_relaxFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_PO4_fluxFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_NO3_fluxFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_FeT_fluxFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_Si_fluxFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_oasim_edFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_oasim_esFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_waterabsorbFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_phytoabsorbFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_particleabsorbFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_surfacespecFile |
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CHARACTER*(MAX_LEN_FNAM) darwin_acdomFile |
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jahn |
1.3 |
CHARACTER*(MAX_LEN_FNAM) darwin_PARunits |
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jahn |
1.4 |
CHARACTER*(MAX_LEN_FNAM) darwin_ironUnits |
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jahn |
1.1 |
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_RL darwin_relaxscale |
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_RL darwin_forcingPeriod |
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_RL darwin_forcingCycle |
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jahn |
1.3 |
_RL darwin_PARFileConv |
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_RL darwin_W_to_uEins |
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jahn |
1.4 |
_RL darwin_ironFileConv |
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_RL darwin_dustFrac |
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jahn |
1.1 |
INTEGER darwin_seed |
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c INPUT: |
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c fice - ice fraction |
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c inputFe - aeolian input of iron |
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c sur_par - surface PAR |
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COMMON /DARWIN_INPUT/ |
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& fice, inputFe, sur_par |
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#ifdef NUT_SUPPLY |
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& ,nut_wvel |
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#endif |
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#ifdef RELAX_NUTS |
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& ,po4_obs, no3_obs, fet_obs, si_obs |
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#endif |
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#ifdef FLUX_NUTS |
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& ,po4_flx, no3_flx, fet_flx, si_flx |
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#endif |
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c |
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_RL fice(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nSx, nSy) |
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_RL inputFe(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nSx, nSy) |
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_RL sur_par(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nSx, nSy) |
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#ifdef NUT_SUPPLY |
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_RL nut_wvel(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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#endif |
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#ifdef RELAX_NUTS |
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_RL po4_obs(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL no3_obs(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL fet_obs(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL si_obs(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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#endif |
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#ifdef FLUX_NUTS |
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_RL po4_flx(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL no3_flx(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL fet_flx(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL si_flx(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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#endif |
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c |
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c OUPUT DIAGNOSTICS |
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c PPave - average primary production |
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c Nfixave - average N fixation |
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c Zoograzave - average zooplankton consumption |
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c Parave - average PAR |
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c Chlave - average chlorophyll |
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benw |
1.5 |
c npzd_timeave - time for averaging |
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c Nlim,Flim,etc- Quota model average limitation factors |
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jahn |
1.1 |
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COMMON /DARWIN_OUPUT/ |
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& PPave, Nfixave, Zoograzave, |
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& PARave, Chlave, Denitave, |
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benw |
1.5 |
#ifdef QUOTA_DIAG_LIMIT |
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& Nlimave,Flimave,Ilimave,Tlimave, |
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#endif |
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jahn |
1.1 |
c ANNA_TAVE |
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#ifdef WAVES_DIAG_PCHL |
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& Pchlave, |
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#endif |
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#ifdef DAR_DIAG_ACDOM |
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& aCDOMave, |
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#endif |
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stephd |
1.6 |
#ifdef DAR_DIAG_PARW |
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& chl2cave, |
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#endif |
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#ifdef DAR_DIAG_EK |
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& Ekave, EkoverEave, acclimave, |
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#endif |
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jahn |
1.1 |
c ANNA end TAVE |
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#ifdef DAR_DIAG_RSTAR |
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& Rstarave, RNstarave, |
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#endif |
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#ifdef DAR_DIAG_DIVER |
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& Diver1ave, Diver2ave, Diver3ave, Diver4ave, |
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#endif |
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#ifdef DAR_DIAG_GROW |
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& Growave, Growsqave, |
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#endif |
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#ifdef ALLOW_DIAZ |
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#ifdef DAR_DIAG_NFIXP |
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& NfixPave, |
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#endif |
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#endif |
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& dar_timeave |
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c |
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_RL PPave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL Nfixave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL Zoograzave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL PARave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL Chlave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL Denitave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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benw |
1.5 |
#ifdef QUOTA_DIAG_LIMIT |
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_RL Nlimave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy, npmax) |
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_RL Flimave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy, npmax) |
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_RL Ilimave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy, npmax) |
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_RL Tlimave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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#endif |
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jahn |
1.1 |
c ANNA_TAVE |
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#ifdef WAVES_DIAG_PCHL |
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_RL Pchlave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy,npmax) |
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#endif |
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#ifdef DAR_DIAG_ACDOM |
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_RL aCDOMave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx,nSy) |
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#endif |
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stephd |
1.6 |
#ifdef DAR_DIAG_PARW |
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_RL chl2cave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy,npmax) |
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#endif |
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#ifdef DAR_DIAG_EK |
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_RL Ekave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy,npmax) |
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_RL EkoverEave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy,npmax) |
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_RL acclimave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy,npmax) |
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#endif |
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jahn |
1.1 |
c ANNA end TAVE |
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#ifdef DAR_DIAG_RSTAR |
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_RL Rstarave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy,npmax) |
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_RL RNstarave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy,npmax) |
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#endif |
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#ifdef DAR_DIAG_DIVER |
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_RL Diver1ave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL Diver2ave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL Diver3ave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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_RL Diver4ave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy) |
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#endif |
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#ifdef DAR_DIAG_GROW |
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_RL Growave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy,npmax) |
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_RL Growsqave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy,npmax) |
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#endif |
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#ifdef ALLOW_DIAZ |
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#ifdef DAR_DIAG_NFIXP |
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_RL NfixPave(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx, nSy,npmax) |
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#endif |
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#endif |
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_RL DAR_timeave(nSx,nSy,nR) |
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#ifdef CHECK_CONS |
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COMMON /DARWIN_CHECK_CONS/ |
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jahn |
1.7 |
& DAR_cons_unitC, DAR_cons_unitN, |
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& DAR_cons_unitP, DAR_cons_unitF, |
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& DAR_cons_unitS, DAR_cons_unitA, |
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& DAR_cons_unitO |
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INTEGER DAR_cons_unitC |
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INTEGER DAR_cons_unitN |
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INTEGER DAR_cons_unitP |
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INTEGER DAR_cons_unitF |
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INTEGER DAR_cons_unitS |
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INTEGER DAR_cons_unitA |
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INTEGER DAR_cons_unitO |
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jahn |
1.1 |
#endif |
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stephd |
1.2 |
#ifdef CALC_RATE_TOTALS |
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COMMON /DARWIN_RATE_TOT/ |
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& DAR_ratetot_unit, DAR_fluxtot_unit |
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INTEGER DAR_ratetot_unit |
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INTEGER DAR_fluxtot_unit |
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#endif |
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jahn |
1.1 |
#ifdef ALLOW_PAR_DAY |
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C PARday :: array for accumulating/storing daily-averaged PAR |
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COMMON /DARWIN_PAR_DAY/ PARday, |
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& darwin_PARavPeriod, darwin_PARnav |
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_RL PARday(1-OLx:sNx+OLx,1-OLy:sNy+OLy,nR,nSx,nSy,2) |
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_RL darwin_PARavPeriod |
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INTEGER darwin_PARnav |
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#endif |
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#ifdef ALLOW_CARBON |
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C-- COMMON /DIC_FILENAMES/ |
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C DIC_windFile :: file name of wind speeds |
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C DIC_atmospFile :: file name of atmospheric pressure |
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C dic_pCO2 :: Atmospheric pCO2 to be rad in data.dic |
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C dic_int* :: place holder to read in a integer number, set at run time |
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COMMON /DIC_FILENAMES/ |
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& DIC_windFile, DIC_atmospFile, |
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& dic_pCO2, dic_int1, dic_int2, dic_int3, dic_int4 |
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CHARACTER*(MAX_LEN_FNAM) DIC_windFile |
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CHARACTER*(MAX_LEN_FNAM) DIC_atmospFile |
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_RL dic_pCO2 |
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INTEGER dic_int1 |
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INTEGER dic_int2 |
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INTEGER dic_int3 |
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INTEGER dic_int4 |
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#endif |
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