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steps: | 
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1) add | 
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setenv CVSROOT ':ext:atn@mitgcm.org:/u/gcmpack' | 
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(for baudelaire.csail.mit.edu: setenv CVSROOT '/u/gcmpack' ) | 
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 | 
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into .cshrc | 
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 | 
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2)  | 
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a) either create a pair of keys and copy the private/ublic one to proper locations or | 
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b) check a machine that has a private key whose public key is in authorizedkeys (say ross) and copy over | 
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 | 
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3) commit file: | 
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cp /scratch/atn/MITgcm/verification/lab_sea/code_5x5_newcode_stripped_v6g/* . | 
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cvs co -P -d atnguyen_contrib MITgcm_contrib/atnguyen | 
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cd atnguyen_contrib/ | 
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mkdir code_21Dec2012_saltplume | 
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cvs add code_21Dec2012_saltplume | 
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%cvs add -m "code latest saltplume fix" code_21Dec2012_saltplume | 
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cd code_21Dec2012_saltplume | 
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cvs -q -n update | 
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cp /scratch/atn/MITgcm/verification/lab_sea/code_5x5_newcode_stripped_v6g/* . | 
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cvs add *.F *.h packages.conf README SIZE.h_mpi | 
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cvs -q update | 
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cvs commit -m "inprogress swapping 1-x with x in plumefrac" *.F *.h packages.conf README SIZE.h_mpi | 
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 | 
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3) remove file: | 
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cd to the dir of file to remove, say filename is "a.h": | 
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cvs -q -n up | 
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rm a.h | 
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cvs remove a.h | 
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cvs commit -m "remove a.h" a.h | 
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cvs -q -n up | 
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 | 
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4) fresh copy of only MITgcm_code + testreport + specific verification exp: | 
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cvs co -P MITgcm_code | 
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cd MITgcm | 
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cvs co -d verification MITgcm/verification/testreport | 
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cd verification | 
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cvs co -d lab_sea MITgcm/verification/lab_sea | 
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 | 
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5) fresh copy of entire code + test report + all verification: | 
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cvs co -P MITgcm | 
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cd MITgcm | 
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cvs -q up -A <-- updating file with the most recent copy, not stuck to tag/release | 
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cvs co -P MITgcm_contrib/atnguyen | 
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cd MITgcm_contrib/ | 
| 47 | 
 | 
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6) check for updates: | 
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cd verification/ | 
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cvs diff testreport           <-- check diff with exact release copy, not most updated one | 
| 51 | 
cvs -diff -r 1.196 testreport <-- check diff with a specific release | 
| 52 | 
cvs -q -n up -A testreport    <-- show if testreport is different that latest release | 
| 53 | 
 | 
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7) grepping experiments relevant, for example the ones running with kpp: | 
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cd verification/ | 
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grep -i 'useKPP.*=.*true' */input*/data.pkg | 
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 | 
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8) run test report: | 
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testreport -norun   <-- only do make clean, genmake2, make depend | 
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testreport -runonly <-- execute whatever is in 'command ..', skip compiling | 
| 61 | 
testreport -q       <-- skip make clean, genmake2, make depend |