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1 heimbach 1.1
2 heimbach 1.2 %% Created for Patrick Heimbach at 2009-04-10 14:06:00 -0400
3 heimbach 1.1
4    
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6    
7    
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10     @string{bams = {Bull.~Am.~Met.~Soc.}}
11    
12     @string{blm = {Bound.~Layer~Meteorol.}}
13    
14     @string{cup = {Cambridge University Press}}
15    
16     @string{dao = {Dyn.~Atmos.~Oceans}}
17    
18     @string{dkrz = {Deutsches Klimarechenzentrum (DKRZ)}}
19    
20     @string{dnmi = {The Norwegian Meteorological Institute (DNMI)}}
21    
22     @string{dsr = {Deep Sea Res.}}
23    
24     @string{ecmwf = {ECMWF}}
25    
26     @string{eos = {EOS Transactions AGU}}
27    
28     @string{esa = {European Space Agency (ESA)}}
29    
30     @string{esapub = {ESA Publications Division, ESTEC, Noordwijk (NL)}}
31    
32     @string{estec = {European Space Research and Technology Centre (ESTEC)}}
33    
34     @string{gaos = {Global Atmos.~Ocean System}}
35    
36     @string{gji = {Geophys.~J.~Int.}}
37    
38     @string{grl = {Geophys.~Res.~Lett.}}
39    
40     @string{ieee = {IEEE Trans.~Geosci. Remote Sensing}}
41    
42     @string{ifremer = {IFREMER/CERSAT}}
43    
44     @string{igarss = {IEEE Press, Piscataway, N.J., USA}}
45    
46     @string{ijrs = {Int.~J.~Remote Sensing}}
47    
48     @string{jaot = {J.~Atmos.~Ocean.~Technol.}}
49    
50     @string{jas = {J.~Atmos.~Sci.}}
51    
52     @string{jclim = {J.~Clim.}}
53    
54     @string{jfm = {J.~Fluid Mech.}}
55    
56     @string{jgr = {J.~Geophys.~Res.}}
57    
58     @string{jms = {J.~Mar.~Sys.}}
59    
60     @string{jpo = {J.~Phys.~Oceanogr.}}
61    
62     @string{mpi = {MPI f\"ur Meteorologie}}
63    
64     @string{mwr = {Mon.~Wea.~Rev.}}
65    
66     @string{omod = {Ocean Modelling}}
67    
68     @string{pnas = {Proc.~Natl.~Acad.~Sci. USA}}
69    
70     @string{ptrsa = {Phil.~Trans.~Roy.~Soc.~A}}
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72     @string{qjrms = {{Q.~J.~R.~Meteorol.~Soc.}}}
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74     @string{tel = {Tellus}}
75    
76    
77 heimbach 1.2 @incollection{gile:01,
78     Author = {Giles, M.},
79     Booktitle = {Automatic Differentiation: From Simulation to Optimization},
80     Date-Added = {2009-04-10 12:27:20 -0400},
81     Date-Modified = {2009-04-10 14:06:00 -0400},
82     Editor = {Corliss, C. and C. Faure and A. Griewank and L. Hascoet and U. Naumann},
83     Pages = {145-152},
84     Publisher = {Springer-Verlag},
85     Title = {On the iterative solution of adjoint equations},
86     Year = {2001}}
87    
88     @article{chri:98,
89     Author = {Christianson, B.},
90     Date-Added = {2009-04-10 11:38:58 -0400},
91     Date-Modified = {2009-04-10 11:40:24 -0400},
92     Journal = {Optimisation Methods and Software},
93     Number = {4},
94     Pages = {307-322},
95     Title = {Reverse accumulation and implicit functions},
96     Volume = {9},
97     Year = {1998}}
98    
99     @article{heim-bugn:09,
100     Author = {P. Heimbach and V. Bugnion},
101     Date-Added = {2009-04-10 10:15:51 -0400},
102     Date-Modified = {2009-04-10 10:15:51 -0400},
103     Journal = {Annals Glaciol.},
104     Pages = {in press},
105     Title = {Greenland ice sheet volume sensitivity to basal, surface, and initial conditions, derived from an adjoint model},
106     Volume = {52},
107     Year = {2009}}
108    
109     @article{venet-etal:09,
110     Author = {Veneziani, M. and C.A. Edwards and A.M. Moore},
111     Date-Added = {2009-04-09 15:24:59 -0400},
112     Date-Modified = {2009-04-09 17:14:52 -0400},
113     Journal = {J.~Geophys.~Res.},
114     Pages = {~},
115     Title = {A Central California modeling study. Part II: Adjoint sensitivities to local and remote driving mechanisms},
116     Volume = {in press},
117     Year = {2009}}
118    
119     @article{moor-etal:09,
120     Author = {Moore, A.M. and H.G. Arango and E. {Di Lorenzo} and A. Miller and B.D. Cornuelle},
121     Date-Added = {2009-04-09 15:22:33 -0400},
122     Date-Modified = {2009-04-09 15:24:56 -0400},
123     Journal = {J.~Phys.~Oceanogr.},
124     Number = {3},
125     Pages = {702-720},
126     Title = {An adjoint sensitivity analysis of the Southern California Current Circulation and ecosystem},
127     Volume = {39},
128     Year = {2009}}
129    
130     @article{smit-hain:09,
131     Author = {Smith, G. and K. Haines },
132     Date-Added = {2009-04-04 01:24:45 -0400},
133     Date-Modified = {2009-04-04 01:25:45 -0400},
134     Journal = {{Q.~J.~R.~Meteorol.~Soc.}},
135     Pages = {~},
136     Title = {Evaluation of the S(T) assimilation method with the Argo dataset},
137     Volume = {in press},
138     Year = {2009}}
139    
140     @article{palm-hain:09,
141     Author = {Palmer, M. and K. Haines },
142     Date-Added = {2009-04-04 01:13:01 -0400},
143     Date-Modified = {2009-04-04 01:14:02 -0400},
144     Journal = {J.~Clim.},
145     Pages = {~},
146     Title = {Estimating oceanic heat content change using isotherms},
147     Volume = {in press},
148     Year = {2009}}
149    
150     @article{palm-etal:07,
151     Author = {Palmer, M. and K. Haines and S. Tett and T. Ansell },
152     Date-Added = {2009-04-04 01:11:29 -0400},
153     Date-Modified = {2009-04-04 01:12:57 -0400},
154     Doi = {10.1029/2007GL031712},
155     Journal = {Geophys.~Res.~Lett.},
156     Pages = {L23610},
157     Title = {Isolating the signal of ocean global warming},
158     Volume = {34},
159     Year = {2007},
160     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2007GL031712}}
161    
162     @misc{palm-etal:09,
163     Author = {Palmer, M. and {others}},
164     Date-Added = {2009-04-04 01:05:54 -0400},
165     Date-Modified = {2009-04-04 01:07:53 -0400},
166     Howpublished = {OceanObs'09 White Paper},
167     Title = {Future observations for monitoring global heat content},
168     Year = {2009}}
169    
170     @article{wij-etal:08,
171     Author = {Wijffels, S.E. and J. Willis and C.M. Domingues and P. Barker and N.J. White and A. Gronell and K. Ridgway and J.A. Church},
172     Date-Added = {2009-04-04 01:02:19 -0400},
173     Date-Modified = {2009-04-04 01:02:19 -0400},
174     Journal = {J.~Clim.},
175     Pages = {5657-5672},
176     Title = {Changing eXpendable Bathythermograph fall-rates and their impact on estimates of thermosteric sea level rise},
177     Volume = {21},
178     Year = {2008}}
179    
180     @article{tref-etal:93,
181     Author = {Trefethen, L.N. and A.E. Trefethen and S.C. Reddy and T.A. Driscoll},
182     Date-Added = {2009-03-31 21:04:39 -0400},
183     Date-Modified = {2009-03-31 21:06:22 -0400},
184     Doi = {10.1126/science.261.5121.578},
185     Journal = {Science},
186     Pages = {578-584},
187     Title = {Hydrodynamic stability without eigenvalues},
188     Volume = {261},
189     Year = {1993},
190     Bdsk-Url-1 = {http://dx.doi.org/10.1126/science.261.5121.578}}
191    
192     @article{gros:00,
193     Author = {Grossmann, S.},
194     Date-Added = {2009-03-31 21:01:08 -0400},
195     Date-Modified = {2009-03-31 21:02:13 -0400},
196     Journal = {Rev.~Mod.~Phys.},
197     Number = {2},
198     Pages = {603-618},
199     Title = {The onset of shear flow turbulence},
200     Volume = {72},
201     Year = {2000}}
202    
203     @article{baeh:08,
204     Author = {Baehr, J.},
205     Date-Added = {2009-03-31 15:23:34 -0400},
206     Date-Modified = {2009-03-31 15:24:11 -0400},
207     Journal = {J.~Phys.~Oceanogr.},
208     Title = {Influence of the RAPID/MOCHA and Florida Current Cable data on the ECCO-GODAE ocean state estimate},
209     Volume = {submitted},
210     Year = {2008}}
211    
212     @article{cart-gies:08,
213     Author = {{Carton}, J.A. and {Giese}, B.S.},
214     Date-Added = {2009-03-31 15:19:12 -0400},
215     Date-Modified = {2009-03-31 15:28:12 -0400},
216     Journal = {Mon.~Wea.~Rev.},
217     Number = {8},
218     Pages = {2999-3017},
219     Title = {A Reanalysis of Ocean Climate Using Simple Ocean Data Assimilation (SODA)},
220     Volume = {136},
221     Year = {2008}}
222    
223     @article{guin-etal:04,
224     Author = {Guinehut, S. and P. Y. Le Traon and G. Larnicol and S. Philipps},
225     Date-Added = {2009-03-31 15:15:28 -0400},
226     Date-Modified = {2009-03-31 15:17:06 -0400},
227     Doi = {10.1016/j.jmarsys.2003.11.022},
228     Journal = {J.~Marine Systems},
229     Number = {1-4},
230     Pages = {85-98},
231     Title = {Combining Argo and remote-sensing data to estimate the ocean three-dimensional temperature fields--a first approach based on simulated observations},
232     Volume = {46},
233     Year = {2004},
234     Bdsk-Url-1 = {http://dx.doi.org/10.1016/j.jmarsys.2003.11.022}}
235    
236     @misc{oke-etal:09,
237     Author = {Oke, P.R. and {9 others}},
238     Date-Added = {2009-03-31 15:00:20 -0400},
239     Date-Modified = {2009-03-31 18:28:34 -0400},
240     Howpublished = {Community White Paper for OceanObs'09},
241     Title = {Ocean observing system evaluation},
242     Year = {2009}}
243    
244     @article{daes:08,
245     Author = {Daescu, D.N.},
246     Date-Added = {2009-03-31 12:37:37 -0400},
247     Date-Modified = {2009-03-31 12:38:57 -0400},
248     Journal = {Mon.~Wea.~Rev.},
249     Pages = {3050-3065},
250     Title = {On the sensitivity equations of four-dimensional variational (4D-Var) data assimilation},
251     Volume = {136},
252     Year = {2008}}
253    
254     @article{trem:08,
255     Author = {Tremolet, Y.},
256     Date-Added = {2009-03-31 12:36:09 -0400},
257     Date-Modified = {2009-03-31 12:37:10 -0400},
258     Journal = {Tellus},
259     Pages = {964-978},
260     Title = {Computation of observation sensitivity and observation impact in incremental variational data assimilation},
261     Volume = {60A},
262     Year = {2008}}
263    
264     @article{gela-etal:07,
265     Author = {Gelaro, R. and Y. Zhu and R.M. Errico},
266     Date-Added = {2009-03-31 12:33:23 -0400},
267     Date-Modified = {2009-03-31 12:35:41 -0400},
268     Journal = {Meteorologische Zeitschrift},
269     Number = {6},
270     Pages = {685-692},
271     Title = {Examination of various-order adjoint-based approximations of observation impact},
272     Volume = {16},
273     Year = {2007}}
274    
275     @article{erri:07,
276     Author = {Errico, R.M.},
277     Date-Added = {2009-03-31 12:30:39 -0400},
278     Date-Modified = {2009-03-31 12:31:57 -0400},
279     Journal = {Tellus},
280     Pages = {273-276},
281     Title = {Interpretations od an adjoint-derived observational impact measure},
282     Volume = {59A},
283     Year = {2007}}
284    
285     @article{gela-zhu:09,
286     Author = {Gelaro, R. and Y. Zhu},
287     Date-Added = {2009-03-31 12:28:13 -0400},
288     Date-Modified = {2009-03-31 12:29:44 -0400},
289     Journal = {Tellus},
290     Pages = {179-193},
291     Title = {Examination of observation impacts derived from observing system experiments (OSEs) and adjoint models},
292     Volume = {61A},
293     Year = {2009}}
294    
295     @article{forg-etal:08b,
296     Author = {Forget, G. and H. Mercier and B. Ferron},
297     Date-Added = {2009-03-31 11:02:04 -0400},
298     Date-Modified = {2009-03-31 11:03:49 -0400},
299     Doi = {10.1016/j.ocemod.2007.06.002},
300     Journal = {Ocean Modelling},
301     Number = {1},
302     Pages = {17-34},
303     Title = {Combining Argo profiles with a general circulation model in the North Atlantic. Part 2: Realistic transports and improved hydrography, between spring 2002 and spring 2003},
304     Volume = {20},
305     Year = {2008b},
306     Bdsk-Url-1 = {http://dx.doi.org/10.1016/j.ocemod.2007.06.002}}
307    
308     @article{forg-etal:08a,
309     Author = {Forget, G. and B. Ferron and H. Mercier},
310     Date-Added = {2009-03-31 10:58:27 -0400},
311     Date-Modified = {2009-03-31 11:01:56 -0400},
312     Doi = {10.1016/j.ocemod.2007.06.001},
313     Journal = {Ocean Modelling},
314     Number = {1},
315     Pages = {1-16},
316     Title = {Combining ARGO profiles with a general circulation model in the North Atlantic. Part I: estimation of hydrographic and circulation anomalies from synthetic profiles, over a year},
317     Volume = {20},
318     Year = {2008},
319     Bdsk-Url-1 = {http://dx.doi.org/10.1016/j.ocemod.2007.06.001}}
320    
321     @article{oke-schi:07,
322     Author = {Oke, P.R. and A. Schiller},
323     Date-Added = {2009-03-31 10:51:19 -0400},
324     Date-Modified = {2009-03-31 10:52:52 -0400},
325     Journal = {Geophys.~Res.~Lett.},
326     Pages = {L19601},
327     Title = {Impact of Argo, SST, and altimeter data on an eddy-resolving ocean reanalysis},
328     Volume = {34},
329     Year = {2007}}
330    
331     @article{vida-etal:07,
332     Author = {Vidard, A. and D. L. T. Anderson and M. Balmaseda},
333     Date-Added = {2009-03-30 22:06:10 -0400},
334     Date-Modified = {2009-03-30 22:07:12 -0400},
335     Journal = {Mon.~Wea.~Rev.},
336     Pages = {409-429},
337     Title = {Impact of ocean observation systems on ocean analysis and seasonal forecasts},
338     Volume = {135},
339     Year = {2007}}
340    
341     @article{rabi-etal:08,
342     Author = {Rabier, F. and P. Gauthier and C. Cardinali and R. Langland and M. Tsyrulnikov and A. Lorenc and P. Steinle and R. Gelaro and K. Koizumi},
343     Date-Added = {2009-03-30 22:03:46 -0400},
344     Date-Modified = {2009-03-31 16:11:28 -0400},
345     Journal = {Nonlinear Processes in Geophysics},
346     Pages = {81-94},
347     Title = {An update on THORPEX-related research in data assimilation and observing strategies},
348     Volume = {15},
349     Year = {2008}}
350    
351     @article{card-etal:04,
352     Author = {Cardinali, C. and S. Pezzulli and E. Andersson},
353     Date-Added = {2009-03-30 22:01:42 -0400},
354     Date-Modified = {2009-03-30 22:02:47 -0400},
355     Journal = {{Q.~J.~R.~Meteorol.~Soc.}},
356     Pages = {2767-2786},
357     Title = {Influence-matrix diagnostic of a data assimilation system},
358     Volume = {130},
359     Year = {2004}}
360    
361     @article{balm-ande:09,
362     Author = {Balmaseda, M. A. and D. Anderson},
363     Date-Added = {2009-03-30 22:00:24 -0400},
364     Date-Modified = {2009-03-30 22:01:36 -0400},
365     Doi = {10.1029/2008GL035561},
366     Journal = {Geophys.~Res.~Lett.},
367     Pages = {L01701},
368     Title = {Impact on initialization strategies and observations on seasonal forecast skill},
369     Volume = {36},
370     Year = {2009},
371     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2008GL035561}}
372    
373     @article{balm-etal:07,
374     Author = {Balmaseda, M. A. and D. Anderson and A. Vidard},
375     Date-Added = {2009-03-30 21:58:55 -0400},
376     Date-Modified = {2009-03-30 22:00:13 -0400},
377     Doi = {10.1029/2007GL030452},
378     Journal = {Geophys.~Res.~Lett.},
379     Pages = {L16605},
380     Title = {Impact of Argo on analyses of the global ocean},
381     Volume = {34},
382     Year = {2007},
383     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2007GL030452}}
384    
385     @article{pont-etal:07,
386     Author = {Ponte, R.M. and C. Wunsch and D.Stammer},
387     Date-Added = {2009-03-30 21:37:35 -0400},
388     Date-Modified = {2009-03-30 21:40:35 -0400},
389     Journal = {J.~Atmos.~Ocean.~Technol.},
390     Number = {6},
391     Pages = {1078-1085},
392     Title = {Spatial mapping of time-variable errors in Jason-1 and TOPEX/POSEIDON sea surface height measurements},
393     Volume = {24},
394     Year = {2007}}
395    
396     @misc{lee-etal:09,
397     Author = {Lee, T. and {26 others}},
398     Date-Added = {2009-03-30 21:21:38 -0400},
399     Date-Modified = {2009-03-30 21:57:07 -0400},
400     Howpublished = {Community White Paper for OceanObs'09},
401     Title = {Ocean State Estimation for Climate Research},
402     Year = {2009}}
403    
404     @article{will-etal:07,
405     Author = {Willis, J. K. and J. M. Lyman and G. C. Johnson and J. Gilson},
406     Date-Added = {2009-03-30 21:14:56 -0400},
407     Date-Modified = {2009-03-30 21:16:17 -0400},
408     Doi = {10.1029/2007GL030323},
409     Journal = {Geophys.~Res.~Lett.},
410     Pages = {L16601},
411     Title = {Correction to Recent cooling of the upper ocean},
412     Volume = {34},
413     Year = {2007},
414     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2007GL030323}}
415    
416     @article{quin-pont:08,
417     Author = {Quinn, K. J. and R. M. Ponte},
418     Date-Added = {2009-03-30 21:12:46 -0400},
419     Date-Modified = {2009-03-30 21:14:29 -0400},
420     Doi = {10.1029/2008JC004903},
421     Journal = {J.~Geophys.~Res.},
422     Pages = {C12013},
423     Title = {Estimating weights for the use of time-dependent Gravity Recovery And Climate Experiment data in constraining ocean models},
424     Volume = {113},
425     Year = {2008},
426     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2008JC004903}}
427    
428     @article{beck-etal:07,
429     Author = {Beckley, B. D. and F. G. Lemoine and S. B. Luthcke and R. D. Ray and N. P. Zelensky},
430     Date-Added = {2009-03-30 21:10:59 -0400},
431     Date-Modified = {2009-03-30 21:12:37 -0400},
432     Doi = {10.1029/2007GL030002},
433     Journal = {Geophys.~Res.~Lett.},
434     Pages = {L14608},
435     Title = {A reassessment of global and regional mean sea level trends from TOPEX and Jason-1 altimetry based on revised reference frame and orbits},
436     Volume = {34},
437     Year = {2007},
438     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2007GL030002}}
439    
440     @article{wikl-berl:07,
441     Author = {Wikle, C.K. and L.M. Berliner},
442     Date-Added = {2009-03-15 22:52:12 -0400},
443     Date-Modified = {2009-03-15 22:53:48 -0400},
444     Journal = {Physica D},
445     Pages = {1-16},
446     Title = {A Bayesian tutorial for data assimilation},
447     Volume = {230},
448     Year = {2007}}
449    
450     @book{tref-embr:05,
451     Author = {Trefethen, L.N. and M. Embree},
452     Date-Added = {2009-03-06 12:41:50 -0500},
453     Date-Modified = {2009-03-06 12:43:38 -0500},
454     Publisher = {Princeton University Press},
455     Title = {Spectra and pseudospectra: the behavior of nonnormal matrices and operators},
456     Year = {2005}}
457    
458     @misc{Anasazi,
459     Author = {Anasazi},
460     Date-Added = {2009-03-02 10:39:48 -0500},
461     Date-Modified = {2009-03-02 10:42:36 -0500},
462     Title = {The {Trilinos} Project},
463     Url = {http://trilinos.sandia.gov/},
464     Year = {2008},
465     Bdsk-Url-1 = {http://trilinos.sandia.gov/}}
466    
467     @techreport{bens-etal:07,
468     Address = {Argonne, IL, 60439},
469     Author = {Benson, S. and L.C. McInnes and J.J. More and T. Munson and J. Sarich},
470     Date-Added = {2009-03-01 23:36:17 -0500},
471     Date-Modified = {2009-03-01 23:39:56 -0500},
472     Institution = {Argonne National Laboratory},
473     Number = {ANL/MCS-TM-242},
474     Organization = {Argonne National Laboratory},
475     Title = {Toolkit for Advanced Optimization (TAO) Users Manual},
476     Type = {Technical Report},
477     Year = {2007}}
478    
479     @article{utCh07,
480     Author = {I. Charpentier and J. Utke},
481     Date-Added = {2009-03-01 22:58:53 -0500},
482     Date-Modified = {2009-03-01 22:58:53 -0500},
483     Note = {submitted to Optimization Methods and Software},
484     Title = {Fast Higher-Order Derivative Tensors},
485     Year = {2007}}
486    
487     @book{mors-fesh:53,
488     Author = {Morse, P.M. and H. Feshbach},
489     Date-Added = {2009-03-01 22:58:16 -0500},
490     Date-Modified = {2009-03-01 22:58:16 -0500},
491     Publisher = {McGraw-Hill},
492     Title = {Methods of Theoretical Physics, Part I},
493     Year = {1953}}
494    
495     @book{thir:97,
496     Address = {New York},
497     Author = {Thirring, W.},
498     Date-Added = {2009-02-28 18:47:41 -0500},
499     Date-Modified = {2009-02-28 18:49:45 -0500},
500     Edition = {3rd},
501     Publisher = {Springer-Verlag},
502     Title = {Classical Mathematial Physics},
503     Year = {1997}}
504    
505     @article{bech:05,
506     Author = {Bechhoefer, J.},
507     Date-Added = {2009-02-28 18:46:23 -0500},
508     Date-Modified = {2009-02-28 18:47:27 -0500},
509     Journal = {Rev.~Mod.~Phys.},
510     Pages = {783-836},
511     Title = {Feedback for physicists: A tutorial essay on control.},
512     Volume = {77},
513     Year = {2005}}
514    
515     @article{wuns-etal:09,
516     Author = {Wunsch, C. and P. Heimbach and R. Ponte and I. Fukumori},
517     Date-Added = {2009-02-28 13:27:25 -0500},
518     Date-Modified = {2009-02-28 13:29:14 -0500},
519     Journal = {Oceanography},
520     Title = {The Global General Circulation of the Oceans Estimated by the ECCO-Consortium},
521     Volume = {in press},
522     Year = {2009}}
523    
524     @book{draz-reid:04,
525     Author = {Drazin, P.G. and W.H. Reid},
526     Date-Added = {2009-02-27 22:31:33 -0500},
527     Date-Modified = {2009-02-27 22:33:08 -0500},
528     Edition = {2nd},
529     Publisher = {Cambridge University Press},
530     Title = {Hydrodynamic Stability},
531     Year = {2004}}
532    
533     @book{palm-hagd:06,
534     Author = {Palmer, T. and R. Hagedorn},
535     Date-Added = {2009-02-27 22:07:11 -0500},
536     Date-Modified = {2009-02-27 22:08:35 -0500},
537     Publisher = {Cambridge University Press},
538     Title = {Predictability of Weather and Climate},
539     Year = {2006}}
540    
541     @article{kami-etal:02,
542     Author = {Kaminski, T. and W. Knorr and M. Heimann},
543     Date-Added = {2009-02-27 19:01:48 -0500},
544     Date-Modified = {2009-02-27 19:03:34 -0500},
545     Journal = {Global Biogeochemical Cycles},
546     Number = {4},
547     Pages = {1-16},
548     Title = {Assimilating atmospheric data into a terrestrial biosphere model: A case study of the seasonal cycle.},
549     Volume = {16},
550     Year = {2002}}
551    
552     @techreport{hern-etal:09,
553     Author = {Hernandez, V. and J.E. Roman and E. Romero and A. Tomas and V. Vidal},
554     Date-Added = {2009-02-27 18:39:59 -0500},
555     Date-Modified = {2009-02-27 18:43:05 -0500},
556     Institution = {Universidad Politecnica de Valencia},
557     Number = {DSIC-II/24/02},
558     Title = {SLEPc Users Manual. Scalable Library for Eigenvalue Problem Computations},
559     Type = {Technical Report},
560     Url = {http://www.grycap.upv.es/slepc},
561     Year = {2009},
562     Bdsk-Url-1 = {http://www.grycap.upv.es/slepc}}
563    
564     @article{pint-etal:07,
565     Author = {Pinty, B. and {9 others}},
566     Date-Added = {2009-02-27 15:32:35 -0500},
567     Date-Modified = {2009-02-27 15:34:32 -0500},
568     Journal = {J.~Geophys.~Res.},
569     Pages = {D10116},
570     Title = {Retrieving surface parameters for climate models from MODIS-MISR albedo products},
571     Volume = {112},
572     Year = {2007}}
573    
574     @article{daes-carm:03,
575     Author = {Daescu, D.N. and G.R. Carmichael},
576     Date-Added = {2009-02-27 15:28:27 -0500},
577     Date-Modified = {2009-02-27 15:31:24 -0500},
578     Journal = {J.~Atmos.~Sci.},
579     Number = {2},
580     Pages = {434-450},
581     Title = {An adjoint sensitivity method for the adaptive location of the observations in air quality modeling. },
582     Volume = {60},
583     Year = {2003}}
584    
585     @article{sand-etal:05,
586     Author = {Sandu, A. and W. Liao and G.R. Carmichael and D.K. Henze and J.H. Seinfeld},
587     Date-Added = {2009-02-27 15:12:54 -0500},
588     Date-Modified = {2009-02-27 15:14:24 -0500},
589     Journal = {Aerosol Science And Technology},
590     Number = {8},
591     Pages = {677-694},
592     Title = {Inverse modeling of aerosol dynamics using adjoints: Theoretical and numerical considerations.},
593     Volume = {39},
594     Year = {2005}}
595    
596     @article{henz-etal:07,
597     Author = {Henze, D.K. and A. Hakami and J.H. Seinfeld},
598     Date-Added = {2009-02-27 15:11:16 -0500},
599     Date-Modified = {2009-02-27 15:12:40 -0500},
600     Journal = {Atmos.~Chem.~Phys.},
601     Number = {9},
602     Pages = {2413-2433},
603     Title = {Development of the adjoint of {GEOS-Chem}},
604     Volume = {7},
605     Year = {2007}}
606    
607     @article{kauk-etal:09,
608     Author = {Kauker, F. and T. Kaminski and M. Karcher and R. Giering and R. Gerdes and M. Vosbeck},
609     Date-Added = {2009-02-19 22:39:15 -0500},
610     Date-Modified = {2009-02-19 22:40:39 -0500},
611     Journal = {Geophys.~Res.~Lett.},
612     Title = {Adjoint analysis of the 2007 all time Arctic sea-ice minimum},
613     Volume = {submitted},
614     Year = {2009}}
615    
616     @techreport{bala-etal:04,
617     Author = {S. Balay and {8 others}},
618     Date-Added = {2009-02-05 10:19:38 -0500},
619     Date-Modified = {2009-02-05 10:22:11 -0500},
620     Institution = {Argonne National Laboratory},
621     Number = {ANL-95/11 - Revision 2.1.5},
622     Title = {{PETS}c Users Manual},
623     Year = {2004}}
624    
625     @book{golu-vanl:96,
626     Author = {Golub, G.H. and C.F. {Van Loan}},
627     Date-Added = {2009-02-05 10:13:16 -0500},
628     Date-Modified = {2009-02-05 10:15:18 -0500},
629     Edition = {3rd},
630     Publisher = {Johns Hopkins University Press},
631     Title = {Matrix Computations},
632     Year = {1996}}
633    
634     @book{tref-bau:97,
635     Author = {Trefethen, L.N. and D. {Bau III}},
636     Date-Added = {2009-02-05 10:12:03 -0500},
637     Date-Modified = {2009-02-05 10:13:06 -0500},
638     Publisher = {SIAM},
639     Title = {Numerical Linear Algebra},
640     Year = {1997}}
641    
642     @book{leho-etal:98,
643     Author = {Lehoucq, R.B. and D.C. Sorensen and C. Yang},
644     Date-Added = {2009-02-05 10:05:32 -0500},
645     Date-Modified = {2009-02-05 10:10:44 -0500},
646     Publisher = {SIAM},
647     Title = {ARPACK Users' Guide: Solution to large scale eigenvalue problems with implicitly restarted Arnoldi methods},
648     Type = {Technical Report},
649     Year = {1998}}
650    
651     @article{zann-tzip:08,
652     Author = {Zanna, L. and E. Tziperman},
653     Date-Added = {2009-02-04 23:38:01 -0500},
654     Date-Modified = {2009-02-28 14:05:21 -0500},
655     Journal = {J.~Phys.~Oceanogr.},
656     Number = {8},
657     Pages = {1820-1830},
658     Title = {Surface optimal excitation of the thermohaline circulation},
659     Volume = {38},
660     Year = {2008}}
661    
662     @article{mars-etal:01b,
663     Author = {Marshall, J. and {9 others}},
664     Date-Added = {2009-02-04 23:21:05 -0500},
665     Date-Modified = {2009-02-04 23:23:03 -0500},
666     Doi = {10.1002/joc.693},
667     Journal = {Int. J. Climatology},
668     Pages = {1863--1898},
669     Title = {North Atlantic climate variability: phenomena, impacts and mechanisms},
670     Volume = {21},
671     Year = {2001},
672     Bdsk-Url-1 = {http://dx.doi.org/10.1002/joc.693}}
673    
674     @article{grif-brya:97,
675     Author = {Griffies, S.M. and K. Bryan},
676     Date-Added = {2009-02-04 23:16:01 -0500},
677     Date-Modified = {2009-02-04 23:17:34 -0500},
678     Journal = {Science},
679     Pages = {181--184},
680     Title = {Predictability of North Atlantic multidecadal climate variability},
681     Volume = {275},
682     Year = {1997}}
683    
684     @article{hurr-etal:06,
685     Author = {Hurrell, J.W. and {18 others}},
686     Date-Added = {2009-02-04 23:07:49 -0500},
687     Date-Modified = {2009-02-04 23:10:54 -0500},
688     Journal = {J.~Clim.},
689     Number = {20},
690     Pages = {5100--5121},
691     Title = {Atlantic Climate Variability and Predictability: A CLIVAR Perspective},
692     Volume = {19},
693     Year = {2006}}
694    
695     @incollection{vall:08,
696     Author = {Vallis, G.K.},
697     Booktitle = {Stochastic Physics and Climate Modelling},
698     Date-Added = {2009-02-04 22:55:42 -0500},
699     Date-Modified = {2009-02-04 23:01:05 -0500},
700     Editor = {T. Palmer and P. Williams},
701     Publisher = {Cambridge University Press},
702     Title = {Mechanisms of climate variability from years to decades},
703     Volume = {in press},
704     Year = {2010}}
705    
706     @article{bias-etal:08,
707     Author = {Biastoch, A. and C.W. Boening and J. Getzlaff and J.-M. Molines and G. Madec},
708     Date-Added = {2009-02-04 22:52:14 -0500},
709     Date-Modified = {2009-02-04 22:53:38 -0500},
710     Journal = {J.~Clim.},
711     Number = {24},
712     Pages = {6599--6615},
713     Title = {Causes of Interannual--Decadal Variability in the Meridional Overturning Circulation of the Midlatitude North Atlantic Ocean},
714     Volume = {21},
715     Year = {2008}}
716    
717     @incollection{Bhowmick2008APT,
718     Abstract = {We present a polynomial-time algorithm to improve the
719     performance of computing the
720     Hessian of a vector-valued function. The values of the Hessian
721     derivatives are calculated by
722     applying face, edge, or vertex elimination operations on a
723     symmetric computational graph. Our
724     algorithm detects symmetry in the graph by matching the
725     vertices and edges with their corresponding
726     pairs; thereby enabling us to identify duplicate operations.
727     Through the detection of symmetry, the
728     computation costs can potentially be halved by performing only
729     one of each of these operations.},
730     Ad_Theotech = {Computational Graph, Hessian},
731     Author = {Sanjukta Bhowmick and Paul D. Hovland},
732     Booktitle = {Advances in Automatic Differentiation},
733     Doi = {10.1007/978-3-540-68942-3_9 <http://dx.doi.org/10.1007/978-3-540-68942-3_9>},
734     Editor = {Christian H. Bischof and H. Martin B{\"u}cker and Paul D. Hovland and Uwe Naumann and J. Utke},
735     Isbn = {978-3-540-68935-5},
736     Issn = {1439-7358},
737     Pages = {91--102},
738     Publisher = {Springer},
739     Title = {A Polynomial-Time Algorithm for Detecting Directed Axial Symmetry in {H}essian Computational Graphs},
740     Year = {2008},
741     Bdsk-Url-1 = {10.1007/978-3-540-68942-3_9%20%3Chttp://dx.doi.org/10.1007/978-3-540-68942-3_9%3E}}
742    
743     @article{coll-alle:02,
744     Author = {Collins, M. and M.R. Allen},
745     Date-Added = {2009-02-04 22:49:02 -0500},
746     Date-Modified = {2009-02-04 22:49:49 -0500},
747     Journal = {J.~Clim.},
748     Number = {21},
749     Pages = {3104--3109},
750     Title = {Assessing the Relative Roles of Initial and Boundary Conditions in Interannual to Decadal Climate Predictability},
751     Volume = {15},
752     Year = {2002}}
753    
754     @article{lati-etal:06,
755     Author = {Latif, M. and M. Collins and H. Pohlmann and N. Keenlyside},
756     Date-Added = {2009-02-04 22:47:02 -0500},
757     Date-Modified = {2009-02-04 22:48:11 -0500},
758     Journal = {J.~Clim.},
759     Number = {23},
760     Pages = {5971--5987},
761     Title = {A Review of Predictability Studies of Atlantic Sector Climate on Decadal Time },
762     Volume = {19},
763     Year = {2006}}
764    
765     @article{coll-etal:06,
766     Author = {Collins, M. and {11 others}},
767     Date-Added = {2009-02-04 22:44:09 -0500},
768     Date-Modified = {2009-02-04 22:45:41 -0500},
769     Journal = {J.~Clim.},
770     Number = {7},
771     Pages = {1195--1203},
772     Title = {Interannual to Decadal Climate Predictability in the North Atlantic: A Multimodel-Ensemble Study},
773     Volume = {19},
774     Year = {2006}}
775    
776     @article{sutt-hods:05,
777     Author = {R.T. Sutton and D.L.R. Hodson},
778     Date-Added = {2009-02-04 22:36:40 -0500},
779     Date-Modified = {2009-02-04 22:37:52 -0500},
780     Journal = {Science},
781     Pages = {115--118},
782     Title = {Atlantic Ocean forcing of North American and European summer climate},
783     Volume = {309},
784     Year = {2005}}
785    
786     @article{keen-etal:08,
787     Author = {Keenlyside, N.S. and M. Latif and J. Jungclaus and L. Kornblueh and E. Roeckner},
788     Date-Added = {2009-02-04 22:28:19 -0500},
789     Date-Modified = {2009-02-04 22:31:25 -0500},
790     Journal = {Nature},
791     Pages = {84--88},
792     Title = {Advancing decadal-scale climate prediction in the North Atlantic sector},
793     Volume = {453},
794     Year = {2008}}
795    
796     @article{gela-etal:99,
797     Author = {Gelaro, R. and R.H. Langland and G.D. Rohali and T.E. Rosmond},
798     Date-Added = {2009-02-03 21:10:04 -0500},
799     Date-Modified = {2009-02-03 21:12:48 -0500},
800     Journal = {{Q.~J.~R.~Meteorol.~Soc.}},
801     Pages = {3299--3327},
802     Title = {An assessment of the singular-vector approach to targeted observations using the FASTEX dataset},
803     Volume = {125},
804     Year = {1999}}
805    
806     @article{buiz-mont:99,
807     Author = {Buizza, R. and A. Montani},
808     Date-Added = {2009-02-03 21:08:04 -0500},
809     Date-Modified = {2009-02-03 21:09:50 -0500},
810     Journal = {J.~Atmos.~Sci.},
811     Pages = {2965--2985},
812     Title = {Targeting observations using singular vectors},
813     Volume = {56},
814     Year = {1999}}
815    
816     @article{penl-sard:95,
817     Author = {C. Penland and P.D. Sardeshmukh},
818     Date-Added = {2009-02-03 07:35:18 -0500},
819     Date-Modified = {2009-02-03 07:36:36 -0500},
820     Journal = {J.~Clim.},
821     Number = {8},
822     Pages = {1999-2024},
823     Title = {The optimal growth of tropical sea surface temperature anomalies},
824     Volume = {8},
825     Year = {1995}}
826    
827     @article{hawk-sutt:09,
828     Author = {Hawkins, E. and R. Sutton},
829     Date-Added = {2009-02-03 07:33:17 -0500},
830     Date-Modified = {2009-04-04 01:15:26 -0400},
831     Doi = {10.1175/2009JCLI2720.1},
832     Journal = {J.~Clim.},
833     Pages = {~},
834     Title = {Decadal predictability of the Atlantic ocean in a coupled GCM: forecast skill and optimal perturbations using linear inverse modeling},
835     Volume = {in press},
836     Year = {2009},
837     Bdsk-Url-1 = {http://dx.doi.org/10.1175/2009JCLI2720.1}}
838    
839     @article{hawk-sutt:08a,
840     Author = {Hawkins, E. and R. Sutton},
841     Date-Added = {2009-02-03 07:31:43 -0500},
842     Date-Modified = {2009-02-03 07:33:12 -0500},
843     Journal = {Geophys.~Res.~Lett.},
844     Pages = {L11603},
845     Title = {Potential predictability of rapid changes in the Atlantic meridional overturning circulation},
846     Volume = {35},
847     Year = {2008a}}
848    
849     @article{fuji-etal:08,
850     Author = {Y. Fujii and H. Tsujino and N. Usui and H. Nakano and M. Kamachi},
851     Date-Added = {2009-02-02 22:15:12 -0500},
852     Date-Modified = {2009-02-02 22:19:44 -0500},
853     Journal = {J.~Geophys.~Res.},
854     Pages = {C07026},
855     Title = {Application of singular vector analysis to the Kuroshio large meander},
856     Volume = {113},
857     Year = {2008}}
858    
859     @article{tzip-etal:08,
860     Author = {Tziperman E. and L. Zanna and C. Penland, 2008},
861     Date-Added = {2009-02-02 22:09:53 -0500},
862     Date-Modified = {2009-02-02 22:11:08 -0500},
863     Journal = {J.~Phys.~Oceanogr.},
864     Number = {3},
865     Pages = {588-604},
866     Title = {Non normal amplification of thermohaline circulation anomaliesnormal thermohaline circulation dynamics in a coupled ocean-atmosphere GCM},
867     Volume = {38},
868     Year = {2008}}
869    
870     @article{mars-etal:07,
871     Author = {Marshall, J. and D. Ferreira and J.-M. Campin and D. Enderton},
872     Date-Added = {2009-02-02 12:41:59 -0500},
873     Date-Modified = {2009-02-02 12:43:39 -0500},
874     Journal = {J.~Atmos.~Sci.},
875     Pages = {4270-4286},
876     Title = {Mean climate and variability of the atmosphere and ocean on an aqua-planet},
877     Volume = {64},
878     Year = {2007}}
879    
880     @article{hall:00,
881     Author = {N.M.J. Hall},
882     Date-Added = {2009-02-02 10:10:48 -0500},
883     Date-Modified = {2009-02-02 10:11:58 -0500},
884     Journal = {J.~Atmos.~Sci.},
885     Pages = {1557-1572},
886     Title = {A simple GCM based on dry dynamics and constant forcing},
887     Volume = {57},
888     Year = {2000}}
889    
890     @article{bles-etal:08,
891     Author = {S. Blessing and R.J. Greatbatch and K. Fraedrich and F. Lunkeit},
892     Date-Added = {2009-02-02 10:01:34 -0500},
893     Date-Modified = {2009-02-02 10:03:38 -0500},
894     Journal = {J.~Clim.},
895     Pages = {4629-4646},
896     Title = {Interpreting the atmospheric circulation trend during the last half of the twentieth century: application of an adjoint model},
897     Volume = {21},
898     Year = {2008}}
899    
900     @article{zann-etal:09b,
901     Author = {L. Zanna and P. Heimbach and A.M. Moore and E. Tziperman},
902     Date-Added = {2009-02-02 09:46:56 -0500},
903     Date-Modified = {2009-02-27 10:39:51 -0500},
904     Journal = {J.~Clim.},
905     Title = {Optimal excitation of interannual Atlantic meridional overturning circulation variability},
906     Volume = {to be submitted},
907     Year = {2009b}}
908    
909     @article{zann-etal:09a,
910     Author = {L. Zanna and P. Heimbach and A.M. Moore and E. Tziperman},
911     Date-Added = {2009-02-02 09:44:30 -0500},
912     Date-Modified = {2009-02-27 10:39:38 -0500},
913     Journal = {J.~Phys.~Oceanogr.},
914     Title = {Optimal growth of tropical Atlantic SST anomalies},
915     Volume = {submitted},
916     Year = {2009a}}
917    
918     @article{seve-etal:09,
919     Author = {F. Sevellec and T. Huck and M.B. Jelloul and N. Grima and J. Viadard and A. Weaver},
920     Date-Added = {2009-02-02 09:41:22 -0500},
921     Date-Modified = {2009-02-02 09:44:24 -0500},
922     Journal = {J.~Phys.~Oceanogr.},
923     Title = {Optimal surface salinity perturbations of the meridional overturning and heat transport in a global ocean general circulation model},
924     Volume = {in press},
925     Year = {2009}}
926    
927     @article{seve-etal:07,
928     Author = {F. Sevellec and M.B. Jelloul and T. Huck},
929     Date-Added = {2009-02-02 09:39:15 -0500},
930     Date-Modified = {2009-02-02 09:41:18 -0500},
931     Journal = {J.~Phys.~Oceanogr.},
932     Pages = {2789-2808},
933     Title = {Optimal surface salinity perturbations influencing the thermohaline circulation},
934     Volume = {37},
935     Year = {2007}}
936    
937     @article{czes-etal:08,
938     Author = {L. Czeschel and D.P. Marshall and H.L. Johnson},
939     Date-Added = {2009-02-02 09:37:55 -0500},
940     Date-Modified = {2009-02-02 09:39:01 -0500},
941     Journal = {Nature},
942     Title = {Oscillatory response of Atlantic overturning to high-latitude forcing},
943     Volume = {under revision},
944     Year = {2008}}
945    
946     @article{lomb-etal:07,
947     Author = {Lombard, A. and D. Garcia and A. Cazenave and G. Ramillien and R. B. Fletchner and M. Ishii},
948     Date-Added = {2008-10-26 20:47:11 -0400},
949     Date-Modified = {2008-10-26 20:50:32 -0400},
950     Journal = {Earth Planet. Sci. Lett.},
951     Pages = {194--202},
952     Title = {Estimation of steric sea level variations from combined GRACE and satellite altimetry data},
953     Volume = {254},
954     Year = {2007}}
955    
956     @inproceedings{bind-etal:07,
957     Author = {N. Bindoff and {12 others}},
958     Booktitle = {Climate Change: The Physical Science Basis. Contribution of Working Group 1 to the Fourth Assessment Report of the IPCC},
959     Date-Added = {2008-10-26 20:41:08 -0400},
960     Date-Modified = {2008-10-26 20:45:50 -0400},
961     Editor = {Solomon, S. and D. Qin and M. Manning and Z. Chen and M. Marquis and K.B. Averyt and M. Tignor and H.L. Miller},
962     Publisher = {Cambridge University Press},
963     Title = {Observations: Oceanic Climate and Sea Level},
964     Year = {2007}}
965    
966     @article{caze-etal:08,
967     Author = {A. Cazenave and K. Dominh and S. Guinehut and E. Berthier and W. Llovel and G. Ramillien and M. Ablain and G. Larnicol},
968     Date-Added = {2008-10-26 20:31:13 -0400},
969     Date-Modified = {2008-10-26 20:34:49 -0400},
970     Doi = {10.1016/j.gloplacha.2008.10.004},
971     Journal = {Global and Planetary Change},
972     Pages = {accepted},
973     Title = {Sea level budget over 2003-2008: a re-evaluation from GRACE space gravimetry, satellite altimetry, and Argo},
974     Year = {2008},
975     Bdsk-Url-1 = {http://dx.doi.org/10.1016/j.gloplacha.2008.10.004}}
976    
977     @article{kerr:08a,
978     Author = {R.A. Kerr},
979     Date-Added = {2008-10-26 19:48:16 -0400},
980     Date-Modified = {2008-10-26 19:49:21 -0400},
981     Journal = {Science},
982     Pages = {51},
983     Title = {Global warming throws some curves in the Atlantic Ocean.},
984     Volume = {322},
985     Year = {2008a}}
986    
987     @article{char-etal:08,
988     Author = {Charrassin, J. B., and {21 others}},
989     Date-Added = {2008-10-01 21:11:14 -0400},
990     Date-Modified = {2008-10-01 21:13:26 -0400},
991     Doi = {10.1073/pnas.0800790105},
992     Journal = {Proc.~Natl.~Acad.~Sci. USA},
993     Month = {August},
994     Number = {33},
995     Pages = {11,634-11,639},
996     Title = {Southern Ocean frontal structure and sea-ice formation rates revealed by elephant seals},
997     Volume = {105},
998     Year = {2008},
999     Bdsk-Url-1 = {http://dx.doi.org/10.1073/pnas.0800790105}}
1000    
1001     @book{grie-walt:08,
1002     Address = {Philadelphia},
1003     Author = {A. Griewank and A. Walther},
1004     Date-Added = {2008-09-29 16:11:49 -0400},
1005     Date-Modified = {2008-09-29 16:22:59 -0400},
1006     Edition = {2nd},
1007     Pages = {442 pp.},
1008     Publisher = {SIAM},
1009     Series = {Frontiers in Applied Mathematics},
1010     Title = {Evaluating Derivatives. Principles and Techniques of Algorithmic Differentiation},
1011     Volume = {19},
1012     Year = {2008}}
1013    
1014 heimbach 1.1 @inproceedings{kim-etal:06b,
1015     Author = {J.G. Kim and E.C. Hunke and W.H. Lipscomb},
1016     Booktitle = {Computational Science -- ICCS 2006},
1017     Date-Added = {2008-09-04 11:43:25 -0400},
1018     Date-Modified = {2008-09-04 11:52:25 -0400},
1019     Doi = {10.1007/11758549},
1020     Editor = {Alexandrov, V.N. and G.D. {van Albada} and P.M.A. Sloot and J.J. Dongarra},
1021     Pages = {533--540},
1022     Publisher = {Springer Verlag},
1023     Series = {Lecture Notes in Computer Science},
1024     Title = {A Sensitivity-enhanced Simulation Approach for Community Climate System Model.},
1025     Volume = {3994, Part IV},
1026 heimbach 1.2 Year = {2006b},
1027     Bdsk-Url-1 = {http://dx.doi.org/10.1007/11758549}}
1028 heimbach 1.1
1029     @article{kim-etal:06a,
1030     Author = {J.G. Kim and E.C. Hunke and W.H. Lipscomb},
1031     Date-Added = {2008-09-04 11:41:46 -0400},
1032     Date-Modified = {2008-09-04 11:43:08 -0400},
1033     Journal = {Ocean Modelling},
1034     Number = {1-2},
1035     Pages = {61-80},
1036     Title = {Sensitivity Analysis and Parameter Tuning Scheme for Global Sea-Ice Modeling},
1037     Volume = {14},
1038     Year = {2006a}}
1039    
1040     @article{park-cava:08,
1041     Author = {C.L. Parkinson and D.J. Cavalieri},
1042     Date-Added = {2008-08-22 11:38:22 -0400},
1043     Date-Modified = {2008-08-22 11:39:41 -0400},
1044     Journal = {J.~Geophys.~Res.},
1045     Pages = {C07003},
1046     Title = {Arctic sea ice variability and trends, 1979--2006},
1047     Volume = {113},
1048     Year = {2008}}
1049    
1050     @article{cava-park:08,
1051     Author = {D.J. Cavalieri and C.L. Parkinson},
1052     Date-Added = {2008-08-22 11:36:29 -0400},
1053     Date-Modified = {2008-08-22 11:38:12 -0400},
1054     Journal = {J.~Geophys.~Res.},
1055     Pages = {C07004},
1056     Title = {Antarctic sea ice variability and trends, 1979--2006},
1057     Volume = {113},
1058     Year = {2008}}
1059    
1060     @article{gier-etal:05,
1061     Author = {R. Giering and T. Kaminski and T. Slawig},
1062     Date-Added = {2008-08-12 19:05:30 -0400},
1063     Date-Modified = {2008-08-12 19:07:31 -0400},
1064     Journal = {Future Generation Computer Systems},
1065     Pages = {1345-1355},
1066     Title = {Generating Efficient Derivative Code with TAF: Adjoint and Tangent Linear Euler Flow Around an Airfoil},
1067     Volume = {21(8)},
1068     Year = {2005}}
1069    
1070 heimbach 1.2 @phdthesis{fent:09,
1071 heimbach 1.1 Address = {Cambridge (MA), USA},
1072     Author = {I. Fenty},
1073     Date-Added = {2008-08-11 08:38:19 -0400},
1074 heimbach 1.2 Date-Modified = {2009-02-02 10:12:38 -0500},
1075 heimbach 1.1 School = {MIT, Program in Atmosphere, Ocean and Climate (PAOC)},
1076 heimbach 1.2 Title = {State estimation of the Labrador Sea with a coupled ocean/sea-ice adjoint model.},
1077 heimbach 1.1 Type = {Ph.D. thesis},
1078 heimbach 1.2 Year = {2009}}
1079 heimbach 1.1
1080 heimbach 1.2 @article{heim-etal:09,
1081 heimbach 1.1 Author = {P. Heimbach and D. Menemenlis and M. Losch and J.M. Campin and C. Hill},
1082     Date-Added = {2008-08-11 08:36:13 -0400},
1083 heimbach 1.2 Date-Modified = {2009-02-02 10:17:34 -0500},
1084 heimbach 1.1 Journal = omod,
1085     Owner = {heimbach},
1086     Pages = {~},
1087     Timestamp = {2007.09.04},
1088     Title = {A dynamic-thermodynamic sea ice model for ocean climate modeling on an Arakawa C-grid: Part 2: Adjoint model sensitivities.},
1089 heimbach 1.2 Volume = {to be submitted},
1090     Year = {2009}}
1091 heimbach 1.1
1092     @incollection{lyon-utke:08,
1093     Author = {A. Lyons and J. Utke},
1094     Booktitle = {Lecture Notes in Computer Science and Engineering (LNCSE)},
1095     Date-Added = {2008-08-11 08:31:05 -0400},
1096     Date-Modified = {2008-08-11 08:52:05 -0400},
1097     Pages = {103--114},
1098     Publisher = {Springer Verlag},
1099     Title = {On the practical exploitation of scarsity},
1100     Volume = {64},
1101     Year = {2008}}
1102    
1103     @techreport{utke:08,
1104     Address = {Chicago, IL},
1105     Author = {J. Utke},
1106     Date-Added = {2008-08-11 08:29:25 -0400},
1107     Date-Modified = {2008-08-11 08:30:52 -0400},
1108     Institution = {Argonne National Laboratory},
1109     Number = {ANL/MCS-P1529-0808},
1110     Title = {A tracing facility for Nonsmooth Model Behavior},
1111     Type = {Preprint},
1112     Year = {2008}}
1113    
1114     @article{lump-spee:07,
1115     Author = {R. Lumpkin and K. Speer},
1116     Date-Added = {2008-08-04 22:37:58 -0400},
1117     Date-Modified = {2008-08-04 22:39:33 -0400},
1118     Journal = {J.~Phys.~Oceanogr.},
1119     Pages = {2550-2562},
1120     Title = {Global ocean meridional overturning},
1121     Volume = {37},
1122     Year = {2007}}
1123    
1124 heimbach 1.2 @article{wuns-heim:09,
1125     Author = {Wunsch, C. and P. Heimbach},
1126 heimbach 1.1 Date-Added = {2008-08-04 17:37:53 -0400},
1127 heimbach 1.2 Date-Modified = {2009-03-10 12:11:50 -0400},
1128 heimbach 1.1 Journal = {J.~Phys.~Oceanogr.},
1129 heimbach 1.2 Number = {2},
1130     Pages = {351-368},
1131 heimbach 1.1 Title = {The globally integrated ocean circulation (MOC), 1992-2006: seasonal and decadal variability},
1132 heimbach 1.2 Volume = {39},
1133     Year = {2009}}
1134 heimbach 1.1
1135     @techreport{scha:07,
1136     Address = {Delft, The Netherlands},
1137     Author = {R. Scharroo},
1138     Date-Added = {2008-04-17 17:38:45 -0400},
1139     Date-Modified = {2008-04-17 17:40:13 -0400},
1140     Institution = {DEOS, Delft University of Technology},
1141     Title = {RADS version 2.2. User Manual and Format Specification.},
1142     Type = {User manual},
1143     Year = {2007}}
1144    
1145     @article{donl-etal:07,
1146     Author = {C. Donlon and {25 others}},
1147     Date-Added = {2008-04-17 17:14:20 -0400},
1148     Date-Modified = {2008-04-17 17:17:26 -0400},
1149     Journal = {Bull.~Am.~Met.~Soc.},
1150     Pages = {1197-1213},
1151     Title = {The Global Ocean Data Assimilation Experiment high-resolution sea surface temperature pilot project (GHRSST-PP)},
1152     Volume = {~},
1153     Year = {2007}}
1154    
1155     @article{forg:08,
1156     Author = {G. Forget},
1157     Date-Added = {2008-04-17 12:13:21 -0400},
1158 heimbach 1.2 Date-Modified = {2009-03-31 08:13:16 -0400},
1159 heimbach 1.1 Journal = {J.~Phys.~Oceanogr.},
1160     Title = {Mapping ocean observations in a dynamical framework: a 2004 -- 2006 Atlas},
1161 heimbach 1.2 Volume = {submitted},
1162 heimbach 1.1 Year = {2008}}
1163    
1164     @article{camp-heim:08,
1165     Author = {J.-M. Campin and P. Heimbach},
1166     Date-Added = {2008-04-17 09:23:18 -0400},
1167     Date-Modified = {2008-04-17 09:25:15 -0400},
1168     Journal = {Ocean Modelling},
1169     Title = {Sea-level, freshwater, and salinity budgets in a linear free surface solution},
1170     Volume = {in preparation},
1171     Year = {2008}}
1172    
1173     @article{bess-etal:08,
1174     Author = {L. Bessi\`eres and G. Madec and F. Lyard},
1175     Date-Added = {2008-04-16 19:37:34 -0400},
1176     Date-Modified = {2008-04-16 19:39:11 -0400},
1177     Journal = {Geophys.~Res.~Lett.},
1178     Pages = {L03609},
1179     Title = {Global tidal residual mean circulation: Does it affect a climate OGCM?},
1180     Volume = {35},
1181     Year = {2008}}
1182    
1183     @article{fox-etal:08,
1184     Author = {B. Fox-Kemper and R. Ferrari and R.W. Hallberg},
1185     Date-Added = {2008-04-16 19:24:33 -0400},
1186     Date-Modified = {2008-04-16 19:30:11 -0400},
1187     Journal = {J.~Phys.~Oceanogr.},
1188     Title = {Parameterization of Mixed Layer Eddies. I: Theory and Diagnosis},
1189     Volume = {in press},
1190     Year = {2008}}
1191    
1192     @article{fox-ferr:08,
1193     Author = {B. Fox-Kemper and R. Ferrari},
1194     Date-Added = {2008-04-16 19:23:17 -0400},
1195     Date-Modified = {2008-04-16 19:24:22 -0400},
1196     Journal = {J.~Phys.~Oceanogr.},
1197     Title = {Parameterization of Mixed Layer Eddies. II: Prognosis and Impact},
1198     Volume = {in press},
1199     Year = {2008}}
1200    
1201     @article{roma-etal:06,
1202     Author = {Romanou, A. and W.B. Rossow and S.-H. Chou},
1203     Date-Added = {2008-04-16 19:16:22 -0400},
1204     Date-Modified = {2008-04-16 19:17:46 -0400},
1205     Doi = {10.1175/JCLI3773.1},
1206     Journal = {J.~Clim.},
1207     Pages = {3378-3393},
1208     Title = {Decorrelation scales of high resolution turbulent fluxes at the ocean-surface and a method to fill-in gaps in satellite data products},
1209     Volume = {19},
1210     Year = {2006},
1211     Bdsk-Url-1 = {http://dx.doi.org/10.1175/JCLI3773.1}}
1212    
1213     @unpublished{heim-koeh:07,
1214     Author = {P. Heimbach and A. K\"ohl},
1215     Date-Added = {2008-04-16 19:08:10 -0400},
1216     Date-Modified = {2008-04-16 19:09:33 -0400},
1217     Month = {August},
1218     Note = {Note prepared for CLIVAR/GSOP},
1219     Title = {A note on parameterizations of the drag coefficient},
1220     Year = {2007}}
1221    
1222     @article{brun-etal:03,
1223     Author = {M.A. Brunke and C.W. Fairall and X. Zeng and L. Eymard and J.A. Curry},
1224     Date-Added = {2008-04-16 18:49:29 -0400},
1225     Date-Modified = {2008-04-16 18:51:24 -0400},
1226     Journal = {J.~Clim.},
1227     Pages = {619--635},
1228     Title = {Which bulk aerodynamical algorithms are least problematic in computing ocean surface turbulent fluxes?},
1229     Volume = {16},
1230     Year = {2003}}
1231    
1232     @article{kara-etal:07,
1233     Author = {A.B. Kara and A.J. Wallcraft and E.J. Metzger and H.E. Hurlburt},
1234     Date-Added = {2008-04-16 18:28:47 -0400},
1235     Date-Modified = {2008-04-16 18:49:03 -0400},
1236     Journal = {J.~Clim.},
1237     Pages = {5856--5864},
1238     Title = {Wind stress drag coefficient over the global ocean},
1239     Volume = {20},
1240     Year = {2007}}
1241    
1242     @article{chel-etal:07,
1243     Author = {D. Chelton and M.G. Schlax and R.M. Samelson},
1244     Date-Added = {2008-04-16 18:26:36 -0400},
1245     Date-Modified = {2008-04-16 18:28:15 -0400},
1246     Journal = {J.~Phys.~Oceanogr.},
1247     Pages = {495--517},
1248     Title = {Summertime coupling between sea surface temperature and wind stress in the California current system},
1249     Volume = {37},
1250     Year = {2007}}
1251    
1252     @article{stor-etal:07,
1253     Author = {J.-S. von Storch and H. Sasaki and j. Marotzke},
1254     Date-Added = {2008-04-16 18:23:56 -0400},
1255     Date-Modified = {2008-04-16 18:26:21 -0400},
1256     Journal = {J.~Phys.~Oceanogr.},
1257     Pages = {657--672},
1258     Title = {Wind-generated power inout to the deep ocean: An estimate using a 1/10$^{\circ}$ general circulation model},
1259     Volume = {37},
1260     Year = {2007}}
1261    
1262     @techreport{wod:05,
1263     Address = {Silver Spring (MD), USA},
1264     Author = {Boyer, T. and J.I. Antonov and H.E. Garcia and D.R. Johnson and R.A. Locarnini and A.V. Mishonov and M.T. Pitcher and O.K. Baranova and I.V. Smolyar},
1265     Date-Added = {2008-04-16 18:12:05 -0400},
1266     Date-Modified = {2008-04-16 18:17:03 -0400},
1267     Institution = {NOAA Atlas NESDIS},
1268     Number = {60},
1269     Title = {World Ocean Database (WOD) 2005},
1270     Url = {http://www.nodc.noaa.gov/OC5/WOD05/pr_wod05.html},
1271     Year = {2006},
1272     Bdsk-Url-1 = {http://www.nodc.noaa.gov/OC5/WOD05/pr_wod05.html}}
1273    
1274     @article{ngo-etal:05b,
1275     Author = {Ngo-Duc, T. and K. Laval and J. Polcher and A. Lombard and A. Cazenave},
1276     Date-Added = {2008-04-16 16:25:31 -0400},
1277     Date-Modified = {2008-04-16 16:29:30 -0400},
1278     Doi = {10.1029/2005GL022719},
1279     Journal = {Geophys.~Res.~Lett.},
1280     Pages = {L09704},
1281     Title = {Effects of land water storage on global mean sea level over the past 50 years},
1282     Volume = {32},
1283     Year = {2005b},
1284     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2005GL022719}}
1285    
1286     @article{ngo-etal:05a,
1287     Author = {Ngo-Duc, T. and J. Polcher and K. Laval},
1288     Date-Added = {2008-04-16 16:23:55 -0400},
1289     Date-Modified = {2008-04-16 16:29:42 -0400},
1290     Doi = {10.1029/2004JD005434},
1291     Journal = {J.~Geophys.~Res.},
1292     Pages = {D06116},
1293     Title = {A 53-year forcing data set for land surface models},
1294     Volume = {110},
1295     Year = {2005a},
1296     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2004JD005434}}
1297    
1298     @article{liu-noce:89,
1299     Author = {D.C. Liu and J. Nocedal},
1300     Date-Added = {2008-04-16 09:53:44 -0400},
1301     Date-Modified = {2008-04-16 09:54:56 -0400},
1302     Journal = {Mathematical Programming B},
1303     Pages = {503-528},
1304     Title = {On the Limited Memory Method for Large Scale Optimization},
1305     Volume = {45(3)},
1306     Year = {1989}}
1307    
1308     @article{noce:80,
1309     Author = {J. Nocedal},
1310     Date-Added = {2008-04-16 09:52:58 -0400},
1311     Date-Modified = {2008-04-16 09:53:40 -0400},
1312     Journal = {Mathematics of Computation},
1313     Pages = {773-782},
1314     Title = {Updating Quasi-Newton Matrices with Limited Storage},
1315     Volume = {35},
1316     Year = {1980}}
1317    
1318     @article{jako-etal:08,
1319     Author = {M. Jakobsson and R. Macnab and L. Mayer and R. Anderson and M. Edwards and J. Hatzky and H.W. Schenke and P. Johnson},
1320     Date-Added = {2008-04-16 09:42:17 -0400},
1321     Date-Modified = {2008-04-16 09:45:36 -0400},
1322     Doi = {10.1029/2008GL033520},
1323     Journal = {Geophys.~Res.~Lett.},
1324     Pages = {L07602},
1325     Title = {An improved bathymetric portrayal of the Arctic Ocean: Implications for ocean modeling and geological, geophysical and oceanographic analyses},
1326     Volume = {35},
1327     Year = {2008},
1328     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2008GL033520}}
1329    
1330     @article{zhan-etal:06,
1331     Author = {Zhang, H.-M. and J.J. Bates and R.W. Reynolds},
1332     Date-Added = {2008-04-16 09:21:29 -0400},
1333     Date-Modified = {2008-04-16 09:23:19 -0400},
1334     Doi = {10.1029/2006GL027086},
1335     Journal = {Geophys.~Res.~Lett.},
1336     Pages = {L17714},
1337     Title = { Assessment of composite global sampling: Sea surface wind speed},
1338     Url = {http://www.ncdc.noaa.gov/oa/rsad/seawinds.html},
1339     Volume = {33},
1340     Year = {2006},
1341     Bdsk-Url-1 = {http://www.ncdc.noaa.gov/oa/rsad/seawinds.html},
1342     Bdsk-Url-2 = {http://dx.doi.org/10.1029/2006GL027086}}
1343    
1344     @article{muen-etal:06,
1345     Author = {A. M\"unchow and H. Melling and K.K. Falkner},
1346     Date-Added = {2008-03-25 17:51:22 -0400},
1347     Date-Modified = {2008-03-25 17:53:20 -0400},
1348     Journal = {J.~Phys.~Oceanogr.},
1349     Number = {11},
1350     Pages = {2025-2041},
1351     Title = {An observational estimate of volume and freshwater flux leaving the Arctic Ocean through Nares Strait},
1352     Volume = {36},
1353     Year = {2006}}
1354    
1355     @article{mell:02,
1356     Author = {H. Melling},
1357     Date-Added = {2008-03-25 17:49:04 -0400},
1358     Date-Modified = {2008-03-25 17:50:50 -0400},
1359     Doi = {10.1029/2001JC001102},
1360     Journal = {J.~Geophys.~Res.},
1361     Number = {C11},
1362     Pages = {3181},
1363     Title = {Sea ice of the Northern Canadian Arctic Archipelago},
1364     Volume = {107},
1365     Year = {2002},
1366     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2001JC001102}}
1367    
1368     @article{mich-etal:06,
1369     Author = {C. Michel and R.G. Ingram and L.R. Harris},
1370     Date-Added = {2008-03-24 18:41:55 -0400},
1371     Date-Modified = {2008-03-24 18:43:22 -0400},
1372     Journal = {Prog.~Oceanogr.},
1373     Pages = {379-401},
1374     Title = {Variability in oceanographic and ecological processes in the Canadian Arctic Archipelago},
1375     Volume = {71},
1376     Year = {2006}}
1377    
1378     @article{grub-etal:07,
1379     Author = {Gruber, N. and M. Gloor and S. Mikaloff-Fletcher and S. Doney and S. Dutkiewicz and M. Follows and M. Gerber and A. Jacobson and F. Joos and K. Lindsay and D. Menemenlis and A. Mouchet and J. Sarmiento and T. Takahashi},
1380     Date-Added = {2007-11-30 19:40:48 -0500},
1381     Date-Modified = {2007-11-30 19:44:48 -0500},
1382     Journal = {J.~Geophys.~Res.},
1383     Pages = {~},
1384     Title = {Oceanic sources and sinks of atmospheric CO2},
1385     Volume = {submitted},
1386     Year = {2007}}
1387    
1388     @article{lee-etal:00,
1389     Author = {T. Lee and J.P. Boulanger and A. Foo and L.L. Fu and R. Giering},
1390     Date-Added = {2007-11-29 18:33:50 -0500},
1391     Date-Modified = {2007-11-29 18:36:05 -0500},
1392     Journal = {J.~Geophys.~Res.},
1393     Pages = {26,063-26,088},
1394     Title = {Data assimilation by an intermediate coupled ocean-atmosphere model: Application to the 1997-1998 El Nino},
1395     Volume = {105(C11)},
1396     Year = {2000}}
1397    
1398     @inproceedings{heim-mene:03,
1399     Author = {P. Heimbach and D. Menemenlis},
1400     Booktitle = {NASA/AOMIP Short course on ocean/sea-ice data assimilation, WHOI, May 10th/11th, 2003},
1401     Citeseerurl = {http://dspace.mit.edu/handle/1721.1/30598},
1402     Date-Added = {2007-11-29 16:22:22 -0500},
1403     Date-Modified = {2007-11-29 16:27:36 -0500},
1404     Editor = {~},
1405     Publisher = {DSpace at MIT},
1406     Title = {Adjoint model code generation via automatic differentiation and its application to ocean/sea-ice state estimation},
1407     Volume = {http://dspace.mit.edu/handle/1721.1/30598},
1408     Year = {2003},
1409     Bdsk-Url-1 = {http://dspace.mit.edu/handle/1721.1/30598}}
1410    
1411     @article{biuw-etal:07,
1412     Author = {Biuw, M. and Boehme, L. and Guinet, C. and Hindell, M. and Costa, D. and Charrassin, J. B. and Roquet, F. and Bailleul, F. and Meredith, M. and Thorpe, S and B. Tremblay and B. McDonald and Y.-H. Park and S. R. Rintoul and N. Bindoff and M. Goebel and D. Crocker and P. Lovell and J. Nicholson and F. Monks and M. A. Fedak},
1413     Date-Added = {2007-11-29 07:59:03 -0500},
1414     Date-Modified = {2007-11-29 08:03:36 -0500},
1415     Doi = {10.1073/pnas.0701121104},
1416     Journal = {Proc.~Natl.~Acad.~Sci. USA},
1417     Pages = {13705-13710},
1418     Title = {Variations in behavior and condition of a Southern Ocean top predator in relation to in situ oceanographic conditions.},
1419     Volume = {104},
1420     Year = {2007},
1421     Bdsk-Url-1 = {http://dx.doi.org/10.1073/pnas.0701121104}}
1422    
1423     @article{pont-etal:01,
1424     Author = {R. Ponte and D. Stammer and C. Wunsch},
1425     Date-Added = {2007-11-29 07:32:26 -0500},
1426     Date-Modified = {2007-11-29 07:34:34 -0500},
1427     Doi = {10.1029/2000GL011671},
1428     Journal = {Geophys.~Res.~Lett.},
1429     Pages = {1775-1778},
1430     Title = {Improving Ocean Angular Momentum Estimates Using a Model Constrained by Data},
1431     Volume = {28(9)},
1432     Year = {2001},
1433     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2000GL011671}}
1434    
1435     @article{heim-wuns:07,
1436     Author = {P. Heimbach and C. Wunsch},
1437     Citeseerurl = {http://www.usclivar.org/publications.html#v5n3},
1438     Date-Added = {2007-11-28 16:10:11 -0500},
1439     Date-Modified = {2007-11-28 18:14:19 -0500},
1440     Journal = {U.S. CLIVAR Variations},
1441     Pages = {~},
1442     Title = {{Estimating the Circulation and Climate of the Ocean} -- {The ECCO Consortia}},
1443     Volume = {V5N3},
1444     Year = {2007},
1445     Bdsk-Url-1 = {http://www.usclivar.org/publications.html#v5n3}}
1446    
1447     @article{koeh:05,
1448     Author = {A. K\"ohl},
1449     Date-Added = {2007-11-28 09:28:30 -0500},
1450     Date-Modified = {2007-11-28 09:29:39 -0500},
1451     Doi = {10.1175/JPO2767.1},
1452     Journal = {J.~Phys.~Oceanogr.},
1453     Pages = {1455--1472},
1454     Title = {Anomalies of Meridional Overturning: Mechanisms in the North Atlantic},
1455     Volume = {35(8)},
1456     Year = {2005},
1457     Bdsk-Url-1 = {http://dx.doi.org/10.1175/JPO2767.1}}
1458    
1459     @article{wuns:07c,
1460     Author = {C. Wunsch},
1461     Date-Added = {2007-11-20 12:52:17 -0500},
1462     Date-Modified = {2007-11-20 12:56:17 -0500},
1463     Journal = {~},
1464     Pages = {~},
1465     Title = {On Measuring Mass Transport Variability in an Eddy-Filled Ocean},
1466     Volume = {{submitted}},
1467     Year = {2007}}
1468    
1469     @article{baeh-etal:08,
1470     Author = {J. Baehr and S. Cunningham and H. Haak and P. Heimbach and T. Kanzow and J. Marotzke},
1471     Date-Added = {2007-11-20 12:45:10 -0500},
1472 heimbach 1.2 Date-Modified = {2009-02-04 09:50:50 -0500},
1473     Journal = {J.~Phys.~Oceanogr.},
1474 heimbach 1.1 Pages = {~},
1475     Title = {Observed and simulated daily variability of the meridional overturning circulation at 26.5N in the Atlantic},
1476 heimbach 1.2 Volume = {submitted},
1477 heimbach 1.1 Year = {2008}}
1478    
1479     @article{mika-etal:06,
1480     Author = {S. E. {Mikaloff Fletcher} and {12 others}},
1481     Date-Added = {2007-11-20 11:52:00 -0500},
1482     Date-Modified = {2007-11-20 12:14:55 -0500},
1483     Doi = {10.1029/2005GB002530},
1484     Journal = {Global Biogeochem. Cycles},
1485     Pages = {GB2002},
1486     Title = {Inverse estimates of anthropogenic CO2 uptake, transport, and storage by the ocean},
1487     Volume = {20},
1488     Year = {2006},
1489     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2005GB002530}}
1490    
1491 heimbach 1.2 @article{wuns-heim:08,
1492     Author = {Wunsch, C. and P. Heimbach},
1493 heimbach 1.1 Date-Added = {2007-11-20 11:17:09 -0500},
1494 heimbach 1.2 Date-Modified = {2009-03-10 12:12:05 -0400},
1495 heimbach 1.1 Journal = {Quaternary Science Reviews},
1496     Pages = {637-651},
1497     Title = {How long to oceanic tracer and proxy equilibrium?},
1498     Volume = {28},
1499 heimbach 1.2 Year = {2008}}
1500 heimbach 1.1
1501     @article{khat:07,
1502     Author = {S. Khatiwala},
1503     Date-Added = {2007-11-20 11:12:10 -0500},
1504     Date-Modified = {2007-11-20 11:14:08 -0500},
1505     Doi = {10.1029/2007GB002923},
1506     Journal = {Glob. Biogeochem. Cycles},
1507     Pages = {GB3001},
1508     Title = {A Computational Framework for Simulation of Biogeochemical Tracers in the Ocean.},
1509     Volume = {21},
1510     Year = {2007},
1511     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2007GB002923}}
1512    
1513     @article{vino-etal:07,
1514     Author = {Vinogradov and R. M. Ponte and P. Heimbach and C. Wunsch},
1515     Date-Added = {2007-11-20 10:31:27 -0500},
1516     Date-Modified = {2007-11-30 12:06:02 -0500},
1517     Journal = {J.~Geophys.~Res.},
1518     Pages = {~},
1519     Title = {The mean seasonal cycle in sea level estimated from a data-constrained general circulation model},
1520     Volume = {{in press}},
1521     Year = {2007}}
1522    
1523     @article{heim:08,
1524     Author = {P. Heimbach},
1525     Date-Added = {2007-11-20 08:59:25 -0500},
1526     Date-Modified = {2008-04-14 09:18:23 -0400},
1527     Journal = {CLIVAR Exchanges},
1528     Month = {January},
1529     Pages = {13-17},
1530     Title = {The MITgcm/ECCO adjoint modelling infrastructure},
1531     Volume = {44 (Volume 13, No. 1)},
1532     Year = {2008}}
1533    
1534     @article{hill-etal:07,
1535     Author = {C. Hill and D. Menemenlis and B. Ciotti and C. Henze},
1536     Date-Added = {2007-11-20 08:49:36 -0500},
1537     Date-Modified = {2007-11-20 08:50:35 -0500},
1538     Journal = {Scientific Programming},
1539     Pages = {107-115},
1540     Title = { Investigating solution convergence in a global ocean model using a 2048-processor cluster of distributed shared memory machines.},
1541     Volume = {12},
1542     Year = {2007}}
1543    
1544     @article{hote-etal:05,
1545     Author = {I. Hoteit and B. Cornuelle and A. K\"ohl and D. Stammer},
1546     Date-Added = {2007-11-20 08:26:06 -0500},
1547     Date-Modified = {2007-11-20 12:13:48 -0500},
1548     Doi = {10.1256/q j.05.97},
1549     Journal = {{Q.~J.~R.~Meteorol.~Soc.}},
1550     Pages = {3659-3682},
1551     Title = {Treating strong adjoint sensitivities in tropical eddy-permitting variational data assimilation.},
1552     Volume = {131},
1553     Year = {2005},
1554     Bdsk-Url-1 = {http://dx.doi.org/10.1256/q%20j.05.97}}
1555    
1556     @book{wuns:06,
1557     Author = {C. Wunsch},
1558     Date-Added = {2007-11-19 11:46:49 -0500},
1559     Date-Modified = {2007-11-19 11:47:48 -0500},
1560     Publisher = {Cambridge University Press},
1561     Title = {Discrete Inverse and State Estimation Problems: With Geophysical Fluid Applications.},
1562     Year = {2006}}
1563    
1564     @article{koeh-stam:07b,
1565     Author = {A. K\"ohl and D. Stammer},
1566     Date-Added = {2007-11-19 11:08:29 -0500},
1567     Date-Modified = {2007-11-19 12:10:53 -0500},
1568     Journal = {ECCO Report Series},
1569     Pages = {~},
1570     Title = {Decadal sea level changes in the 50-year GECCO ocean synthesis.},
1571     Volume = {44},
1572     Year = {2007b}}
1573    
1574     @article{koeh-stam:07a,
1575     Author = {A. K\"ohl and D. Stammer},
1576     Date-Added = {2007-11-19 11:06:05 -0500},
1577     Date-Modified = {2007-11-19 12:10:34 -0500},
1578     Journal = {ECCO Report Series},
1579     Pages = {~},
1580     Title = {Variability of the Meridional Overturning in the North Atlantic from the 50 years GECCO State Estimation.},
1581     Volume = {43},
1582     Year = {2007a}}
1583    
1584     @article{redl-boen:97,
1585     Author = {R. Redler and C. B{\"o}ning},
1586     Date-Added = {2007-10-01 18:16:38 -0400},
1587     Date-Modified = {2007-10-01 18:18:24 -0400},
1588     Journal = {J.~Geophys.~Res.},
1589     Pages = {18,529--18,552},
1590     Title = {Effect of the overflows on the circulation in the subpolar North Atlantic: A regional model study},
1591     Volume = {102},
1592     Year = {1997}}
1593    
1594     @article{robe-wood:97,
1595     Author = {M.J. Roberts and R.A. Woods},
1596     Date-Added = {2007-10-01 18:11:56 -0400},
1597     Date-Modified = {2007-10-01 18:14:41 -0400},
1598     Journal = {J.~Phys.~Oceanogr.},
1599     Pages = {823--836},
1600     Title = {Topograsphic sensitivity studies with a Bryan-Cox-type ocean model},
1601     Volume = {27},
1602     Year = {1997}}
1603    
1604     @article{ezer-mell:04,
1605     Author = {T. Ezer and G.L. Mellor},
1606     Date-Added = {2007-10-01 18:06:01 -0400},
1607     Date-Modified = {2007-10-01 18:07:36 -0400},
1608     Doi = {10.1016/S1463-5003(03)00026-X},
1609     Journal = {Ocean Modelling},
1610     Pages = {379--403},
1611     Title = {A generalized coordinate ocean model and a comparison of the bottom boundary layer dynamics in terrain-following and in z-level grids},
1612     Volume = {6(3-4)},
1613     Year = {2004},
1614     Bdsk-Url-1 = {http://dx.doi.org/10.1016/S1463-5003(03)00026-X}}
1615    
1616     @article{koes-etal:05,
1617     Author = {F. K{\"o}sters and R. H. K{\"a}se and A. Schmittner and P. Herrmann},
1618     Date-Added = {2007-10-01 17:55:26 -0400},
1619     Date-Modified = {2007-10-01 17:57:06 -0400},
1620     Doi = {10.1029/2004GL022112,doi:10.1029/2004GL022112},
1621     Journal = {Geophys.~Res.~Lett.},
1622     Pages = {L04602},
1623     Title = {The effect of Denmark Strait overflow on the Atlantic Meridional Overturning Circulation},
1624     Volume = {32},
1625     Year = {2005},
1626     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2004GL022112,doi:10.1029/2004GL022112}}
1627    
1628     @article{schm-etal:05,
1629     Author = {A. Schmittner and M. Latif and B. Schneider},
1630     Date-Added = {2007-10-01 17:53:31 -0400},
1631     Date-Modified = {2007-10-01 17:54:46 -0400},
1632     Doi = {2005GL024368,doi:10.1029/2005GL024368},
1633     Journal = {Geophys.~Res.~Lett.},
1634     Pages = {L23710},
1635     Title = {Model projections of the North Atlantic thermohaline circulation for the 21st century assessed by observations},
1636     Volume = {32},
1637     Year = {2005},
1638     Bdsk-Url-1 = {http://dx.doi.org/2005GL024368,doi:10.1029/2005GL024368}}
1639    
1640     @article{greg-etal:05,
1641     Author = {J. M. Gregory and K. W. Dixon and R. J. Stouffer and A. J. Weaver and E. Driesschaert and M. Eby and T. Fichefet and H. Hasumi and A. Hu and J. H. Jungclaus and I. V. Kamenkovich and A. Levermann and M. Montoya and S. Murakami and S. Nawrath and A. Oka and A. P. Sokolov and R. B. Thorpe},
1642     Date-Added = {2007-10-01 17:47:48 -0400},
1643     Date-Modified = {2007-10-01 17:52:02 -0400},
1644     Doi = {10.1029/2005GL023209},
1645     Journal = {Geophys.~Res.~Lett.},
1646     Pages = {L12703},
1647     Title = {A model intercomparison of changes in the Atlantic thermohaline circulation in response to increasing atmospheric CO$_2$ concentration},
1648     Volume = {32},
1649     Year = {2005},
1650     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2005GL023209}}
1651    
1652     @article{cunn-etal:07,
1653     Author = {S. A. Cunningham and T. Kanzow and D. Rayner and M. O. Baringer and W. E. Johns and J. Marotzke and H. R. Longworth and E. M. Grant and J. J.-M. Hirschi and L. M. Beal and C. S. Meinen and H. L. Bryden},
1654     Date-Added = {2007-10-01 15:53:53 -0400},
1655     Date-Modified = {2007-10-01 15:57:13 -0400},
1656     Doi = {10.1126/science.1141304},
1657     Journal = {Science},
1658     Pages = {935--938},
1659     Title = {Temporal variability of the Atlantic meridional overturning circulation at 26.5 degrees N},
1660     Volume = {317},
1661     Year = {2007},
1662     Bdsk-Url-1 = {http://dx.doi.org/10.1126/science.1141304}}
1663    
1664     @article{bias-etal:07,
1665     Author = {A. Biastoch and C. B{\"o}ning and J. Getzlaff and J.-M. Molines and G. Madec},
1666     Date-Added = {2007-10-01 15:51:50 -0400},
1667     Date-Modified = {2007-10-01 15:53:33 -0400},
1668     Journal = {Clim.~Dyn.},
1669     Pages = {{~}},
1670     Title = {Mechanisms of interannual - decadal variability in the meridional overturning circulation of the mid-latitude North Atlantic Ocean},
1671     Volume = {{submitted}},
1672     Year = {2007}}
1673    
1674     @article{baeh-etal:07,
1675     Author = {J. Baehr and K. Keller and J. Marotzke},
1676     Date-Added = {2007-10-01 15:35:25 -0400},
1677     Date-Modified = {2007-10-01 15:51:34 -0400},
1678     Doi = {10.1007/s10584-006-9153-z},
1679     Journal = {Climatic Change},
1680     Pages = {{~}},
1681     Title = {Detecting potential changes in the meridional overturning circulation at 26$^{\circ}$N in the Atlantic},
1682     Volume = {in press.},
1683     Year = {2007},
1684     Bdsk-Url-1 = {http://dx.doi.org/10.1007/s10584-006-9153-z}}
1685    
1686     @article{smit-etal:00,
1687     Author = {R.D. Smith and M.E. Maltrud and F.O. Bryan and M.W. Hecht},
1688     Date-Added = {2007-10-01 15:21:38 -0400},
1689     Date-Modified = {2007-10-01 17:15:53 -0400},
1690     Journal = {J.~Phys.~Oceanogr.},
1691     Pages = {1532--1561},
1692     Title = {Numerical simulation of the North Atlantic at 1/10$^{\circ}$},
1693     Volume = {30},
1694     Year = {2000}}
1695    
1696     @article{lee-etal:07,
1697     Author = {M.-M. Lee and A.J.G. Nurser and A.C. Coward and B.A. {de Cuevas}},
1698     Date-Added = {2007-10-01 15:16:42 -0400},
1699     Date-Modified = {2007-10-01 15:21:22 -0400},
1700     Doi = {10.1175/JPO3057.1},
1701     Journal = {J.~Phys.~Oceanogr.},
1702     Number = {1376--1393},
1703     Title = {Eddy active and diffusive transports of heat and salt in the Southern Ocean},
1704     Volume = {37},
1705     Year = {2007},
1706     Bdsk-Url-1 = {http://dx.doi.org/10.1175/JPO3057.1}}
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1710     Date-Added = {2007-10-01 11:46:50 -0400},
1711     Date-Modified = {2007-10-01 15:25:04 -0400},
1712     Journal = {Prog.~Oceanogr.},
1713     Pages = {123--161},
1714     Title = {Circulation characteristics in three eddy-ermitting models of the North Atlantic},
1715     Volume = {48},
1716     Year = {2001}}
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1720     Date-Added = {2007-10-01 11:43:42 -0400},
1721     Date-Modified = {2007-10-01 11:53:49 -0400},
1722     Journal = {J.~Geophys.~Res.},
1723     Pages = {20,799--20,808},
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1728     @article{gree-howa:63,
1729     Author = {H.P. Greenspan and L.N. Howard},
1730     Date-Added = {2007-09-08 12:02:35 -0400},
1731     Date-Modified = {2007-09-08 12:04:31 -0400},
1732     Journal = {Fluid Mech.},
1733     Local-Url = {file://localhost/Users/heimbach/PapersLibrary/Greenspan_Howard63.pdf},
1734     Pages = {385-404},
1735     Title = {On a time-dependent motion of a rotating fluid},
1736     Volume = {17},
1737     Year = {1963},
1738 heimbach 1.2 Bdsk-File-1 = {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}}
1739 heimbach 1.1
1740     @article{ekma:05,
1741     Author = {W. Ekman},
1742     Date-Added = {2007-09-08 11:55:37 -0400},
1743     Date-Modified = {2007-09-08 11:57:41 -0400},
1744     Journal = {Arkiv foer Matematik, Astronomi och Fysik},
1745     Local-Url = {file://localhost/Users/heimbach/PapersLibrary/Ekman_1905.pdf},
1746     Number = {11},
1747     Pages = {1-51},
1748     Title = {On the influence of the Earth's rotation on ocean-currents},
1749     Volume = {2},
1750     Year = {1905},
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1752 heimbach 1.1
1753     @article{knol-keye:04,
1754     Author = {D.A. Knoll and D.E. Keyes},
1755     Date-Added = {2007-09-08 09:05:55 -0400},
1756     Date-Modified = {2007-09-08 09:08:47 -0400},
1757     Doi = {doi:10.1016/j.jcp.2003.08.010},
1758     Journal = {J. Computational Physics},
1759     Local-Url = {file://localhost/Users/heimbach/PapersLibrary/keyes_krylov.pdf},
1760     Pages = {357--397},
1761     Title = {Jacobian-free Newton--Krylov methods: a survey of approaches and applications},
1762     Volume = {193},
1763     Year = {2004},
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1765 heimbach 1.1 Bdsk-Url-1 = {http://dx.doi.org/10.1016/j.jcp.2003.08.010}}
1766    
1767     @article{foll-etal:07,
1768     Abstract = {A marine ecosystem model seeded with many phytoplankton types, whose physiological traits were
1769     randomly assigned from ranges defined by field and laboratory data, generated an emergent
1770     community structure and biogeography consistent with observed global phytoplankton
1771     distributions. The modeled organisms included types analogous to the marine cyanobacterium
1772     Prochlorococcus. Their emergent global distributions and physiological properties simultaneously
1773     correspond to observations. This flexible representation of community structure can be used to
1774     explore relations between ecosystems, biogeochemical cycles, and climate change},
1775     Author = {M.J. Follows and S. Dutkiewicz and S. Grant and S.W. Chisholm},
1776     Date-Added = {2007-09-08 08:44:40 -0400},
1777     Date-Modified = {2007-09-08 08:48:38 -0400},
1778     Doi = {10.1126/science.1138544},
1779     Journal = {Science},
1780     Local-Url = {file://localhost/Users/heimbach/PapersLibrary/science_follows_etal_2007.pdf},
1781     Pages = {1843-1846},
1782     Title = {Emergent Biogeography of Microbial Communities in a Model Ocean},
1783     Volume = {315},
1784     Year = {2007},
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1786 heimbach 1.1 Bdsk-Url-1 = {http://dx.doi.org/10.1126/science.1138544}}
1787    
1788     @inproceedings{wuns:07b,
1789     Abstract = {The human eye and brain are powerful pattern detection in-
1790     struments. Coupled with the clear human need to perceive the world as
1791     deterministic and understandable, and the often counter-intuitive results of
1792     probability theory, it is easy to go astray in making inferences. In partic-
1793     ular, many examples exist where attention was called to apparent extreme
1794     behavior, whether in time or space series, or in the appearance of unusual
1795     patterns, that are just happenstance. Used carefully, and with a residual
1796     open-mindedness, it is possible to employ some simple statistical tests to
1797     avoid the outcomes of inferring unusual behavior where none is present, nor
1798     in rejecting a major finding as being insignificant.
1799     },
1800     Author = {C. Wunsch},
1801     Booktitle = {Aha Hulika'a Hawaiin Winter Workshop on Extreme Events},
1802     Date-Added = {2007-09-08 08:14:56 -0400},
1803     Date-Modified = {2007-10-01 11:52:25 -0400},
1804     Editor = {P. Mueller},
1805     Local-Url = {file://localhost/Users/heimbach/PapersLibrary/wunschaha2007.pdf},
1806     Title = {Extremes, Patterns, and Other Structures in Oceanographic and Climate Records},
1807     Year = {2007b},
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1809 heimbach 1.1
1810     @manual{ACTS:www,
1811     Author = {{{\zzz}ACTS}},
1812     Title = {{\tt http://www-unix.mcs.anl.gov/~naumann/ACTS/}},
1813     Year = {URL}}
1814    
1815     @manual{ecco-godae:www,
1816     Author = {{{\zzz}ECCO-GODAE}},
1817     Title = {{\tt http://ecco.mit.edu/}},
1818     Year = {URL}}
1819    
1820     @manual{ecco2:www,
1821     Author = {{{\zzz}ECCO2}},
1822     Title = {{\tt http://ecco2.org/}},
1823     Year = {URL}}
1824    
1825     @manual{ecco:www,
1826     Author = {{{\zzz}ECCO}},
1827     Title = {{\tt http://www.ecco-group.org/}},
1828     Year = {URL}}
1829    
1830     @manual{ers:www,
1831     Author = {{{\zzz}ERS-1/2}},
1832     Title = {{\tt http://earth.esa.int/ers/}},
1833     Year = {URL}}
1834    
1835     @manual{jason:www,
1836     Author = {{{\zzz}Jason-1}},
1837     Title = {{\tt http://sealevel.jpl.nasa.gov/mission/jason-1.html}},
1838     Year = {URL}}
1839    
1840     @manual{mfstep:www,
1841     Author = {{{\zzz}MFSTEP}},
1842     Title = {{\tt http://www.bo.ingv.it/mfstep/}},
1843     Year = {URL}}
1844    
1845     @manual{mfs:www,
1846     Author = {{{\zzz}MFS}},
1847     Title = {{\tt http://www.mersea.eu.org/html/information/model/mfs\_overview.html}},
1848     Year = {URL}}
1849    
1850     @manual{mitgcm:www,
1851     Author = {{{\zzz}MITgcm}},
1852     Title = {{\tt http://mitgcm.org}},
1853     Year = {URL}}
1854    
1855     @manual{med6:www,
1856     Author = {{{\zzz}MODB}},
1857     Title = {{\tt http://modb.oce.ulg.ac.be/modb/welcome.html}},
1858     Year = {URL}}
1859    
1860     @manual{ncep:www,
1861     Author = {{{\zzz}NCEP}},
1862     Title = {{\tt http://www.ncep.noaa.gov/}},
1863     Year = {URL}}
1864    
1865     @manual{nsidc:www,
1866     Author = {{{\zzz}NSIDC}},
1867     Title = {{\tt http://nsidc.org/}},
1868     Year = {URL}}
1869    
1870     @manual{openad:www,
1871     Author = {{{\zzz}OpenAD}},
1872     Title = {{\tt http://www-unix.mcs.anl.gov/OpenAD/}},
1873     Year = {URL}}
1874    
1875     @manual{sdsc-threads:www,
1876     Author = {{{\zzz}SDSC Threads}},
1877     Title = {{\tt http://www.sdsc.edu/user\_services/ newsletter/common/newsletter.php?\%20 issue=2006-02\&corner=fstory}},
1878     Year = {February 2006}}
1879    
1880     @manual{taf:www,
1881     Author = {{{\zzz}TAF}},
1882     Title = {{\tt http://www.fastopt.com/}},
1883     Year = {URL}}
1884    
1885     @manual{topex:www,
1886     Author = {{{\zzz}TOPEX/Poseidon}},
1887     Title = {{\tt http://topex-www.jpl.nasa.gov/}},
1888     Year = {URL}}
1889    
1890     @manual{WOCE:www,
1891     Author = {{{\zzz}WOCE}},
1892     Title = {{\tt http://www.woce.org/}},
1893     Year = {URL}}
1894    
1895     @article{adcr-camp:04,
1896     Author = {A. Adcroft and J.M. Campin},
1897     Journal = omod,
1898     Pages = {269--284},
1899     Title = {Rescaled height coordinates for accurate representation of free-surface flows in ocean circulation models},
1900     Volume = {7(3-4)},
1901     Year = {2004}}
1902    
1903     @techreport{adcr-etal:02,
1904     Address = {Cambridge, MA 02139, USA},
1905     Author = {A. Adcroft and J.-M. Campin and P. Heimbach and C. Hill and J. Marshall},
1906     Institution = {MIT / EAPS},
1907     Note = {{\tt http://mitgcm.org/sealion/ online\_documents/manual.html}},
1908     Number = {~},
1909     Title = {MITgcm Release1 Manual},
1910     Type = {(online documentation)},
1911     Year = {2002}}
1912    
1913     @article{adcr-etal:04,
1914     Author = {A. Adcroft and J.-M. Campin and C. Hill and J. Marshall},
1915     Journal = mwr,
1916     Pages = {2845--2863},
1917     Title = {Implementation of an atmosphere-ocean general circulation model on the expanded spherical cube},
1918     Volume = {132(12)},
1919     Year = {2004}}
1920    
1921     @article{adcr-etal:99,
1922     Author = {A. Adcroft and C. Hill and J. Marshall},
1923     Journal = mwr,
1924     Pages = {1928--1936},
1925     Title = {A new treatment of the Coriolis terms in C-grid models at both high and low resolutions},
1926     Volume = {127},
1927     Year = {1999}}
1928    
1929     @incollection{akce-etal:06,
1930     Author = {V. Akcelik and G. Biros and O. Ghattas and J. Hill and D. Keyes and B. van {Bloemen Waanders}},
1931     Booktitle = {Methods in Computational Physics},
1932     Editor = {M. Heroux and P. Raghaven and H. Simon},
1933     Publisher = {SIAM},
1934     Title = {Parallel algorithms for PDE-constrained optimization},
1935     Year = {2006}}
1936    
1937     @article{akce-etal:05,
1938     Author = {V. Akcelik and G. Biros and O. Ghattas and D. Keyes and K. Ko and L.-Q. Lee and E.G. Ng},
1939     Journal = {J. Phys.: Conf. Ser.},
1940     Pages = {435-445},
1941     Title = {Adjoint methods for electromagnetic shape optimization of the low-loss cavity for the International Linear Collider},
1942     Volume = {16},
1943     Year = {2005}}
1944    
1945     @article{ande-etal:05,
1946     Author = {E. Andersson and {13 others}},
1947     Journal = bams,
1948     Pages = {387--402},
1949     Title = {Assimilation and modeling of the atmospheric hydrological cycle in the ECMWF forecasting system},
1950     Volume = {86(3)},
1951     Year = {2005}}
1952    
1953     @article{anto-etal:05,
1954     Author = {J.I. Antonov and S. Levitus and T.P. Boyer},
1955     Journal = grl,
1956     Pages = {L12602},
1957     Title = {Thermosteric sea level rise, 1955--2003},
1958     Volume = {32},
1959     Year = {2005}}
1960    
1961     @incollection{ara-lam:77,
1962     Author = {Arakawa, A. and Lamb, V.},
1963     Booktitle = {Methods in Computational Physics},
1964     Pages = {174-267},
1965     Publisher = {Academic Press},
1966     Title = {Computational Design of the Basic Dynamical Processes of the {UCLA} General Circulation Model},
1967     Volume = {17},
1968     Year = {1977}}
1969    
1970     @article{arbi-etal:04,
1971     Author = {B.K. Arbic and S.T. Garner and R.W. Hallberg and H.L. Simmons},
1972     Journal = dsr,
1973     Owner = {heimbach},
1974     Pages = {3069--3101},
1975     Timestamp = {2007.05.07},
1976     Title = {The accuracy of surface elevations in forward global barotropic and baroclinic tide models},
1977     Volume = {Part II, 51},
1978     Year = {2004}}
1979    
1980     @techreport{tani-smol:00,
1981     Address = {Ann Arbor (MI), USA},
1982     Author = {{Arctic Climatology Project}},
1983     Editor = {F. Tanis and V. Smolyanitsky},
1984     Institution = {Environmental Research Institute of Michigan in association with the National Snow and Ice Data Center},
1985     Number = {~},
1986     Title = {Environmental Working Group Joint US-Russian Atlas of the Arctic Ocean -- Winter Period},
1987     Type = {CD-ROM},
1988     Year = {2000}}
1989    
1990     @techreport{timo-tani:98,
1991     Address = {Ann Arbor (MI), USA},
1992     Author = {{Arctic Climatology Project}},
1993     Editor = {L. Timokhov and F. Tanis},
1994     Institution = {Environmental Research Institute of Michigan in association with the National Snow and Ice Data Center},
1995     Number = {~},
1996     Title = {Environmental Working Group Joint US-Russian Atlas of the Arctic Ocean -- Summer Period},
1997     Type = {CD-ROM},
1998     Year = {1998}}
1999    
2000     @techreport{timo-tani:97,
2001     Address = {Ann Arbor (MI), USA},
2002     Author = {{Arctic Climatology Project}},
2003     Editor = {L. Timokhov and F. Tanis},
2004     Institution = {Environmental Research Institute of Michigan in association with the National Snow and Ice Data Center},
2005     Number = {~},
2006     Title = {Environmental Working Group Joint US-Russian Atlas of the Arctic Ocean -- Winter Period},
2007     Type = {CD-ROM},
2008     Year = {1997}}
2009    
2010     @article{argo:02,
2011     Author = {ARGO},
2012     Journal = {Nature},
2013     Pages = {954--955},
2014     Title = {Voyage of the argonauts},
2015     Volume = {415},
2016     Year = {2002}}
2017    
2018     @article{atoc:98,
2019     Author = {{ATOC Consortium}},
2020     Date-Modified = {2007-11-29 18:12:07 -0500},
2021     Journal = {Science},
2022     Pages = {1327--1332},
2023     Title = {Ocean climate change: Comparison of acoustic tomography, satellite altimetry and modeling},
2024     Volume = {281},
2025     Year = {1998}}
2026    
2027     @article{ayou:06,
2028     Author = {N. Ayoub},
2029     Doi = {10.1016/j.ocemod.2005.06.003},
2030     Journal = omod,
2031     Pages = {319-347},
2032     Title = {Estimation of boundary values in a North Atlantic circulation model using an adjoint method},
2033     Volume = {12(3-4)},
2034     Year = {2006},
2035     Bdsk-Url-1 = {http://dx.doi.org/10.1016/j.ocemod.2005.06.003}}
2036    
2037     @article{bat-eta:95,
2038     Author = {D.S. Battisti and U.S. Bhatt and M.A. Alexander},
2039     Journal = jclim,
2040     Pages = {3067--3083},
2041     Title = {A modeling study of the interannual variability of the North Atlantic Ocean},
2042     Volume = {8},
2043     Year = {1995}}
2044    
2045     @article{beng-etal:07,
2046     Author = {L. Bengtsson and {15 others}},
2047     Journal = bams,
2048     Owner = {heimbach},
2049     Pages = {495-501},
2050     Timestamp = {2007.09.06},
2051     Title = {The need for a dynamical climate reanalysis},
2052     Volume = {88(4)},
2053     Year = {2007}}
2054    
2055     @book{benn:02,
2056     Author = {A. Bennett},
2057     Pages = {234pp.},
2058     Publisher = {Cambridge University Press},
2059     Title = {Inverse modeling of the ocean and atmosphere},
2060     Year = {2002}}
2061    
2062     @article{benn-kloe:81,
2063     Author = {Bennett, A. and P. E. Kloeden},
2064     Journal = jpo,
2065     Pages = {1004--1018},
2066     Title = {The ill-posedness of open ocean models},
2067     Volume = {12},
2068     Year = {1981}}
2069    
2070     @article{bis-eta:03,
2071     Author = {C. Bischof and B. Lang and A. Vehreschild},
2072     Doi = {10.1002/pamm.200310013},
2073     Journal = {Proceedings in Applied Mathematics and Mechanics},
2074     Owner = {heimbach},
2075     Pages = {50--53},
2076     Title = {Automatic Differentiation for MATLAB Programs},
2077     Volume = {2(1)},
2078     Year = {2003},
2079     Bdsk-Url-1 = {http://dx.doi.org/10.1002/pamm.200310013}}
2080    
2081     @incollection{bis:94,
2082     Address = {Dordrecht, NL},
2083     Author = {C.H. Bishof},
2084     Booktitle = {High Performance Computing in the Geosciences},
2085     Editor = {F.X. {Le Dimet}},
2086     Pages = {59--80},
2087     Publisher = {Kluwer},
2088     Series = {Series C: Mathematical and Physical Sciences},
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2223     Owner = {heimbach},
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2225     Timestamp = {2007.08.08},
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2227     Volume = {56(1)},
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3033     Author = {R.J. Greatbatch},
3034     Journal = jgr,
3035     Pages = {12,767--12,771},
3036     Title = {A note on the representation of steric sea level in models that conserve volume rather than mass},
3037     Volume = {99, C6},
3038     Year = {1994}}
3039    
3040     @incollection{grie:89,
3041     Address = {Dordrecht, NL},
3042     Author = {A. Griewank},
3043     Booktitle = {Mathematical Programming: Recent Developments and Applications},
3044     Editor = {M. Iri and K. Tanabe},
3045     Pages = {83--108},
3046     Publisher = {Kluwer},
3047     Title = {On automatic differentiation},
3048     Year = {1989}}
3049    
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3051     Address = {Philadelphia},
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3053     Pages = {369 pp.},
3054     Publisher = {SIAM},
3055     Series = {Frontiers in Applied Mathematics},
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3057     Volume = {19},
3058     Year = {2000}}
3059    
3060     @article{grie:92,
3061     Author = {A.~Griewank},
3062     Journal = {Optimization Methods and Software},
3063     Pages = {35--54},
3064     Title = {Achieving logarithmic growth of temporal and spatial complexity in reverse {A}utomatic {D}ifferentiation},
3065     Volume = {1},
3066     Year = {1992}}
3067    
3068     @incollection{grif:05,
3069     Address = {Berlin},
3070     Author = {S.M. Griffies},
3071     Booktitle = {Ocean Weather Forecasting: an integrated view of Oceanography},
3072     Editor = {E.P. Chassignet and J. Verron},
3073     Pages = {19--74},
3074     Publisher = {Springer},
3075     Title = {Some ocean model fundamentals},
3076     Year = {2005}}
3077    
3078     @article{grif-etal:01,
3079     Author = {S.M. Griffies and R.C. Pacanowski and M. Schmidt and V. Balaji},
3080     Journal = mwr,
3081     Pages = {1081--1098},
3082     Title = {Tracer conservation with an explicit free surface method for z-coordinate ocean models},
3083     Volume = {129},
3084     Year = {2001}}
3085    
3086     @article{grif-tzip:95,
3087     Author = {S.M. Griffies and E. Tziperman},
3088     Journal = jclim,
3089     Pages = {2440--2453},
3090     Title = {A linear thermohaline oscillator driven by stochastic atmospheric forcing},
3091     Volume = {8},
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3093    
3094     @article{gris-jose:03,
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3099     Volume = {16(20)},
3100     Year = {2003}}
3101    
3102     @article{gro-eta:98,
3103     Author = {A. Gr{\"o}tzner and M. Latif and T.P. Barnett},
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3107     Volume = {11},
3108     Year = {1998}}
3109    
3110     @article{hak:99,
3111     Author = {S. Hakkinen},
3112     Journal = jgr,
3113     Pages = {10,991--11,007},
3114     Title = {Variability of the simulated meridional heat transport in the North Atlantic for the period 1951--1993},
3115     Volume = {104},
3116     Year = {1999}}
3117    
3118 heimbach 1.2 @article{hall:86,
3119 heimbach 1.1 Author = {M.C.G. Hall},
3120 heimbach 1.2 Date-Modified = {2009-02-03 21:01:37 -0500},
3121 heimbach 1.1 Journal = jas,
3122     Pages = {2644--2651},
3123     Title = {Application of adjoint sensitivity theory to an atmospheric general circulation model},
3124     Volume = {43},
3125     Year = {1986}}
3126    
3127 heimbach 1.2 @article{hall-etal:82,
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3129 heimbach 1.2 Date-Modified = {2009-02-03 21:02:08 -0500},
3130 heimbach 1.1 Journal = jas,
3131     Pages = {2038--3050},
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3133     Volume = {39},
3134     Year = {1982}}
3135    
3136     @article{hans-etal:05,
3137     Author = {J. Hansen and {14 others}},
3138     Journal = {Science},
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3141     Volume = {308},
3142     Year = {2005}}
3143    
3144     @article{hans-etal:83,
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3146     Journal = mwr,
3147     Owner = {heimbach},
3148     Pages = {609--662},
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3150     Volume = {111},
3151     Year = {1983}}
3152    
3153     @article{cheapAdjoints,
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3157     Year = {2007}}
3158    
3159     @incollection{has:88,
3160     Address = {Dordrecht (NL)},
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3162     Booktitle = {Physically-Based Modelling and Simulation of Climate and Climatic Change},
3163     Editor = {{M.E. Schlesinger}},
3164     Pages = {583--614},
3165     Publisher = {Kluwer Academic Publishers},
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3168     Volume = {C 243},
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3170    
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3176     Title = {Ocean Circulation and Climate Change},
3177     Volume = {43AB},
3178     Year = {1991}}
3179    
3180     @article{has:82,
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3183     Pages = {69--92},
3184     Title = {An ocean model for climate variability studies},
3185     Volume = {11},
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3187    
3188 heimbach 1.2 @article{hass:76,
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3190 heimbach 1.2 Date-Modified = {2009-02-02 12:20:59 -0500},
3191 heimbach 1.1 Journal = {Tellus},
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3196    
3197     @techreport{has-has:96,
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3200     Institution = mpi,
3201     Number = {209},
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3206    
3207     @article{has-eta:97,
3208     Author = {K. Hasselmann and S. Hasselmann and R. Giering and V. Oca{\~n}a and H. v. Storch},
3209     Journal = {Climatic Change},
3210     Pages = {345--386},
3211     Title = {Sensitivity study of optimal CO2 emission paths using a simplified Structural Integrated Assessment Model (SIAM)},
3212     Volume = {37},
3213     Year = {1997}}
3214    
3215     @incollection{heim:03,
3216     Author = {P. Heimbach},
3217     Booktitle = {Short course on ocean/sea-ice data assimilation, WHOI, May 10th/11th, 2003},
3218     Owner = {heimbach},
3219     Publisher = {DSpace at MIT},
3220     Timestamp = {2007.08.08},
3221     Title = {Adjoint model code generation via automatic differentiation and its application to ocean/sea-ice state estimation},
3222     Url = {http://hdl.handle.net/1721.1/30598},
3223     Volume = {http://hdl.handle.net/1721.1/30598},
3224     Year = {2003},
3225     Bdsk-Url-1 = {http://hdl.handle.net/1721.1/30598}}
3226    
3227     @incollection{heim-etal:02,
3228     Address = {Berlin (Germany)},
3229     Author = {P. Heimbach and C. Hill and R. Giering},
3230     Booktitle = {Computational Science -- ICCS 2002},
3231     Editor = {{J.J. Dongarra, P.M.A. Sloot and C.J.K. Tan}},
3232     Pages = {1019-1028},
3233     Publisher = {Springer-Verlag},
3234     Series = {Lecture Notes in Computer Science},
3235     Title = {Automatic Generation of Efficient Adjoint Code for a Parallel Navier-Stokes Solver},
3236     Volume = {2331, part 3},
3237     Year = {2002}}
3238    
3239     @article{heim-etal:05,
3240     Author = {P. Heimbach and C. Hill and R. Giering},
3241     Doi = {10.1016/j.future.2004.11.010},
3242     Journal = {Future Generation Computer Systems},
3243     Pages = {1356--1371},
3244     Title = {An efficient exact adjoint of the parallel MIT general circulation model, generated via automatic differentiation},
3245     Volume = {21(8)},
3246     Year = {2005},
3247     Bdsk-Url-1 = {http://dx.doi.org/10.1016/j.future.2004.11.010}}
3248    
3249     @incollection{heim-etal:06,
3250     Author = {P. Heimbach and R.M. Ponte and C. Evangelinos and G. Forget and M. Mazloff and D. Menemenlis and S. Vinogradov and C. Wunsch},
3251     Booktitle = {Proceedings of the 15 Years of Progress in Radar Altimetry Symposium},
3252     Publisher = {ESA},
3253     Series = {ESA Special Publication},
3254     Title = {Combining Altimetric and All Other Data with a General Circulation Model.},
3255     Volume = {SP-614},
3256     Year = {2006}}
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3260     Journal = bams,
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3264     Year = {1994}}
3265    
3266     @article{hend:72,
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3268     Journal = {Geophys. J. Roy. Astron. Soc.},
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3279     Year = {2000}}
3280    
3281     @article{hib:80,
3282     Author = {W. D. {Hibler III}},
3283     Journal = mwr,
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3287     Volume = {1},
3288     Year = {1980}}
3289    
3290     @article{hib:79,
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3292     Journal = jpo,
3293     Owner = {heimbach},
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3296     Volume = {9},
3297     Year = {1979}}
3298    
3299     @article{ehill-etal:07,
3300     Author = {E.H. {Hill III} and D. Enderton and P. Heimbach and C.N. Hill},
3301     Journal = mwr,
3302     Pages = {~},
3303     Title = {SPGrid : A Grid Generation Program for Domain-Decomposed Oceanographic and Atmospheric Models},
3304     Volume = {submitted},
3305     Year = {2007}}
3306    
3307     @article{hill-etal:04,
3308     Author = {C. Hill and V. Bugnion and M. Follows and J. Marshall},
3309     Doi = {10.1029/2002JC001598},
3310     Journal = jgr,
3311     Note = {submitted},
3312     Pages = {11005},
3313     Title = {Evaluating carbon sequestration efficiency in an ocean circulation model by adjoint sensitivity analysis.},
3314     Volume = {109(C11)},
3315     Year = {2004},
3316     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2002JC001598}}
3317    
3318     @inproceedings{hill-mars:95,
3319     Address = {New York},
3320     Author = {C. Hill and J Marshall},
3321     Booktitle = {Proceedings of Parallel Computational Fluid Dynamics},
3322     Pages = {545-552},
3323     Publisher = {Elsevier Science},
3324     Title = {Application of a Parallel {N}avier-{S}tokes Model to Ocean Circulation in Parallel Computational Fluid Dynamics},
3325     Year = {1995}}
3326    
3327     @article{chill-etal:06,
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3329     Journal = {J. Scientific Programming},
3330     Pages = {~},
3331     Title = {Investigating solution convergence in a global ocean model using a 2048-processor cluster of distributed shared memory machines},
3332     Volume = {{submitted}},
3333     Year = {2006}}
3334    
3335     @inproceedings{hoe-eta:99,
3336     Author = {J.C. Hoe and C. Hill and A.Adcroft},
3337     Booktitle = {Proceedings of Supercomputing 1999, Portland (Oregon), USA},
3338     Pages = {15pp.},
3339     Title = {A personal supercomputer for climate research},
3340     Year = {1999}}
3341    
3342     @incollection{hol:94,
3343     Address = {Venezia (I)},
3344     Author = {W.R. Holland},
3345     Booktitle = {The generasl circulation of the oceans},
3346     Editor = {{P. Malanotte-Rizzoli}},
3347     Pages = {55--156},
3348     Publisher = {Instituto Veneto de Scienze, Lettere ed Arti},
3349     Title = {Numerical models of ocean circulation},
3350     Year = {1994}}
3351    
3352     @incollection{hol:89,
3353     Address = {Berlin (Germany)},
3354     Author = {G. Holloway},
3355     Booktitle = {Oceanic circulation models: Combining data and dynamics},
3356     Editor = {{D.L.T. Anderson and J. Willebrand}},
3357     Pages = {513--593},
3358     Publisher = {Springer-Verlag},
3359     Series = {NATO ASI Series},
3360     Title = {Subgridscale Representation},
3361     Volume = {C 284},
3362     Year = {1989}}
3363    
3364     @article{huan:93,
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3368     Title = {Real freshwater flux as natural boundary condition for the salinity balance and thermohaline circulation forced by evaporation and precipitation},
3369     Volume = {23},
3370     Year = {1993}}
3371    
3372     @article{huan-schm:93,
3373     Author = {R.X. Huang and R.W. Schmitt},
3374     Journal = jpo,
3375     Pages = {1277--1284},
3376     Title = {The {Goldsbrough-Stommel} circulation in the world oceans},
3377     Volume = {23},
3378     Year = {1993}}
3379    
3380     @article{hug-smi:96,
3381     Author = {C.W. Hughes and M.J. Smithson},
3382     Journal = grl,
3383     Pages = {2243--2246},
3384     Title = {Bottom pressure correlations in the South Atlantic},
3385     Volume = {23},
3386     Year = {1996}}
3387    
3388     @techreport{hunk-lips:04,
3389     Address = {Los Alamos, NM, 87545},
3390     Author = {E.C. Hunke and W.H. Lipscomb},
3391     Institution = {T-3 Fluid Dynamics Group, Los Alamos National Laboratory},
3392     Pages = {56 pp.},
3393     Type = {Manual},
3394     Volume = {~},
3395     Year = {2004}}
3396    
3397     @article{hunk-duko:02,
3398     Author = {E. C. Hunke and J. K. Dukowicz},
3399     Journal = mwr,
3400     Owner = {heimbach},
3401     Pages = {1848-1865},
3402     Timestamp = {2007.09.07},
3403     Title = {The Elastic-Viscous-Plastic Sea Ice Dynamics Model in General Orthogonal Curvilinear Coordinates on a Sphere-Incorporation of Metric Terms},
3404     Volume = {130},
3405     Year = {2002}}
3406    
3407 heimbach 1.2 @article{hurr:95,
3408 heimbach 1.1 Author = {J.W. Hurrell},
3409 heimbach 1.2 Date-Modified = {2009-02-04 23:07:42 -0500},
3410 heimbach 1.1 Journal = {Nature},
3411     Pages = {676--679},
3412     Title = {Decadal trends in the North Atlantic Oscillation: Regional temperatures and precipitation},
3413     Volume = {269},
3414     Year = {1995}}
3415    
3416     @article{jack-mcdo:95,
3417     Author = {David R. Jackett and Trevor J. McDougall},
3418     Journal = jaot,
3419     Number = {4},
3420     Pages = {381--389},
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3422     Volume = {12},
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3424    
3425     @article{jayn-stla:01,
3426     Author = {Jayne, S.R. and {St. Laurent}, L.C.},
3427     Journal = grl,
3428     Owner = {heimbach},
3429     Pages = {811-814},
3430     Title = {Parameterizing Tidal Dissipation over Rough Topography},
3431     Volume = {28(5)},
3432     Year = {2001}}
3433    
3434     @article{jayn-etal:04,
3435     Author = {Jayne, S.R. and {St. Laurent}, L.C. and S.T. Gille},
3436     Journal = {Oceanogrphy},
3437     Owner = {heimbach},
3438     Pages = {65--74},
3439     Title = {Connections between ocean bottom topography and Earth's climate},
3440     Volume = {17},
3441     Year = {2004}}
3442    
3443     @article{jin:97,
3444     Author = {F. Jin},
3445     Journal = jclim,
3446     Pages = {1821--1835},
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3448     Volume = {10},
3449     Year = {1997}}
3450    
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3452     Address = {Southampton (UK)},
3453     Author = {S. Josey and C. Kent and P. Taylor},
3454     Institution = {Southampton Oceanographic Centre (SOC)},
3455     Number = {6},
3456     Pages = {30 pp.},
3457     Title = {The Southampton Oceanographic Centre (SOC) ocean-atmosphere heat, momentum and freshwater flux atlas},
3458     Type = {Technical Report},
3459     Year = {1998}}
3460    
3461     @article{jose-etal:99,
3462     Author = {S. Josey and C. Kent and P. Taylor},
3463     Journal = jclim,
3464     Pages = {2856--2880},
3465     Title = {New insights into the ocean heat budget closure problem from analysis of the SOC air-sea flux climatology},
3466     Volume = {12},
3467     Year = {199}}
3468    
3469     @article{jung-etal:06,
3470     Author = {J.H. Jungclaus and {8 others}},
3471     Journal = {jclim},
3472     Owner = {heimbach},
3473     Pages = {3952-3972},
3474     Timestamp = {2006.12.06},
3475     Title = {Ocean circulation and tropical variability in the coupled model {ECHAM5/MPI-OM}},
3476     Volume = {19},
3477     Year = {2006}}
3478    
3479 heimbach 1.2 @article{jung-hain:01,
3480 heimbach 1.1 Author = {M.M. Junge and T.W.N. Haine},
3481 heimbach 1.2 Date-Modified = {2009-02-03 06:53:20 -0500},
3482 heimbach 1.1 Journal = jclim,
3483     Pages = {4560--4572},
3484     Title = {Mechanisms of North Atlantic wintertime sea surface temperature anomalies},
3485     Volume = {14},
3486     Year = {2001}}
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3488     @article{koeh-etal:06b,
3489     Author = {A. K\"ohl and D. Dommenget and K. Ueyoshi and D. Stammer},
3490     Date-Modified = {2007-11-19 12:10:01 -0500},
3491     Journal = {~},
3492     Pages = {~},
3493     Title = {The Global ECCO 1952 to 2001 Ocean Synthesis},
3494     Volume = {submitted},
3495     Year = {2006b}}
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3497     @article{koeh-stam:04,
3498     Author = {A. K\"ohl and D. Stammer},
3499     Journal = jpo,
3500     Pages = {529--542},
3501     Title = {Optimal observations for variational data assimilation},
3502     Volume = {34},
3503     Year = {2004}}
3504    
3505     @article{koeh-etal:07,
3506     Author = {A. K\"ohl and D. Stammer and B. Cornuelle},
3507     Date-Modified = {2007-11-20 04:34:19 -0500},
3508     Doi = {10.1175/JPO3014.1},
3509     Journal = {J.~Phys.~Oceanogr.},
3510     Pages = {313-337},
3511     Title = {Interannual to decadal changes in the ECCO global synthesis},
3512     Volume = {37(2)},
3513     Year = {2007},
3514     Bdsk-Url-1 = {http://dx.doi.org/10.1175/JPO3014.1}}
3515    
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3518     Doi = {10.1029/2001JC000982},
3519     Journal = jgr,
3520     Pages = {3092},
3521     Title = {Variational assimilation of SSH variability from TOPEX/POSEIDON and ERS1 into an eddy-permitting model of the North Atlantic},
3522     Volume = {108(C3)},
3523     Year = {2003},
3524     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2001JC000982}}
3525    
3526     @article{koeh-will:02,
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3528     Journal = {Tellus},
3529     Pages = {406--425},
3530     Title = {An adjoint method for the assimilation of statistical characteristics into eddy-resolving models},
3531     Volume = {54A},
3532     Year = {2002}}
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3535     Author = {F. K\"osters and R. K\"ase and K. Fleming and D. Wolf},
3536     Doi = {10.1029/2003PA000972},
3537     Journal = {Paleoceanography},
3538     Pages = {2019},
3539     Title = {Denmark Strait overflow for Last Glacial Maximum to Holocene conditions},
3540     Volume = {19},
3541     Year = {2004},
3542     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2003PA000972}}
3543    
3544     @article{kaln-etal:96,
3545     Author = {E. Kalnay and {21 others}},
3546     Journal = bams,
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3548     Title = {The NCEP/NCAR 40-Year Reanalysis Project},
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3550     Year = {1996}}
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3555     Booktitle = {Computational Science -- ICCSA 2003},
3556 heimbach 1.2 Date-Modified = {2009-02-27 19:01:45 -0500},
3557 heimbach 1.1 Editor = {{V. Kumar and M. Gavrilova and C.J.K. Tan and P. L'Ecuyer}},
3558     Pages = {95-104},
3559     Publisher = {Springer-Verlag},
3560     Series = {Lecture Notes in Computer Science},
3561     Title = {An example of an automatic differentiation-based modelling system},
3562     Volume = {2668, part 2},
3563     Year = {2003}}
3564    
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3567     Journal = jgr,
3568     Pages = {18,555--18,581},
3569     Title = {A coarse grid three-dimensional global inverse model of the atmospheric transport. 2: Inversion of the transport of ${\rm CO_2}$ in the 1980s},
3570     Volume = {104},
3571     Year = {1999b}}
3572    
3573     @article{kam-eta:99a,
3574     Author = {T. Kaminski and M. Heimann and R. Giering},
3575     Journal = jgr,
3576     Pages = {18,535--18,553},
3577     Title = {A coarse grid three-dimensional global inverse model of the atmospheric transport. 1: Adjoint model and Jacobian matrix},
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3579     Year = {1999a}}
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3587     Year = {2000}}
3588    
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3617     Owner = {heimbach},
3618     Publisher = {SIAM},
3619     Timestamp = {2007.05.07},
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3625     Date-Modified = {2007-11-20 10:31:07 -0500},
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3744     Date-Modified = {2007-09-08 08:20:31 -0400},
3745     Institution = {NCAR},
3746     Local-Url = {file://localhost/Users/heimbach/PapersLibrary/CORE_LY04_release_notes.2004_09_29.pdf},
3747     Number = {NCAR/TN-460+STR},
3748     Pages = {111},
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3750     Type = {Technical Note},
3751     Year = {2004},
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3901 heimbach 1.2 Date-Modified = {2009-02-02 10:17:12 -0500},
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4023     Editor = {{D.L.T. Anderson and J. Willebrand}},
4024     Pages = {501--511},
4025     Publisher = {Springer-Verlag},
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4027     Title = {Instabilities and multiple steady states of the thermohaline circulation},
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4033     Author = {J. Marotzke},
4034     Booktitle = {Ocean processes in climate dynamics: Global and Mediterranean Examples},
4035     Editor = {{P. Malanotte-Rizzoli and A.R. Robinson}},
4036     Pages = {79--109},
4037     Publisher = {Kluwer Academic Publishers},
4038     Title = {Ocean models in climate problems},
4039     Year = {1994}}
4040    
4041     @article{maro-etal:99,
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4043     Journal = jgr,
4044     Pages = {29,529--29,547},
4045     Title = {Construction of the adjoint {MIT} ocean general circulation model and application to {A}tlantic heat transport variability},
4046     Volume = {104, C12},
4047     Year = {1999}}
4048    
4049     @article{maro-kli:00,
4050     Author = {J. Marotzke and B.A. Klinger},
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4054     Volume = {30},
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4058     Author = {J. Marotzke and P. Stone},
4059     Journal = jpo,
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4062     Volume = {25},
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4064    
4065     @article{maro-etal:88,
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4070     Volume = {40A},
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4072    
4073     @article{maro-will:91,
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4078     Volume = {21},
4079     Year = {1991}}
4080    
4081     @article{maro-wun:93,
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4083     Journal = jgr,
4084     Pages = {20,149--20,167},
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4086     Volume = {98, C11},
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4089     @article{mar-eta:05,
4090     Author = {R. Marsh and B.A. {de Cuevas} and A.C. Coward and H.L. Bryden and M. Alvarez},
4091     Doi = {10.1029/2004GL022281},
4092     Journal = grl,
4093     Owner = {heimbach},
4094     Pages = {L10604},
4095     Title = {Thermohaline circulation at three key sections in the North Atlantic over 1985-2002},
4096     Volume = {32},
4097     Year = {2005},
4098     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2004GL022281}}
4099    
4100     @article{mars-etal:04,
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4102     Journal = mwr,
4103     Pages = {2882--2994},
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4105     Volume = {132(12)},
4106     Year = {2004}}
4107    
4108     @article{mars-etal:97b,
4109     Author = {J. Marshall and A. Adcroft and C. Hill and L. Perelman and C. Heisey},
4110     Journal = jgr,
4111     Pages = {5,753--5,766},
4112     Title = {A finite-volume, incompressible Navier Stokes model for studies of the ocean on parallel computers},
4113     Volume = {102, C3},
4114     Year = {1997b}}
4115    
4116     @article{mars-etal:97a,
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4118     Journal = jgr,
4119     Pages = {5,733--5,752},
4120     Title = {Hydrostatic, quasi-hydrostatic and nonhydrostatic ocean modeling},
4121     Volume = {102, C3},
4122     Year = {1997a}}
4123    
4124     @article{mars-etal:01a,
4125     Author = {J. Marshall and H. Johnson and J. Goodman},
4126     Journal = jclim,
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4129     Volume = {14},
4130     Year = {2001a}}
4131    
4132     @article{mars-etal:98,
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4134     Journal = jms,
4135     Pages = {115--134},
4136     Title = {Efficient ocean modeling using non-hydrostatic algorithms},
4137     Volume = {18},
4138     Year = {1998}}
4139    
4140     @article{mars-etal:02,
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4142     Journal = {Int. J. Climatology},
4143     Pages = {1863--1898},
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4148     @techreport{mazl:08,
4149     Address = {MIT-WHOI Joint Program, Cambridge (MA), USA},
4150     Author = {Matthew Mazloff},
4151     Date-Modified = {2008-08-04 22:37:40 -0400},
4152     Institution = {Massachusetts Institute of Technology},
4153     Number = {2008},
4154     Title = {Production and analysis of an eddy-permitting Southern Ocean state estimate},
4155     Type = {Ph.D. thesis},
4156     Year = {2008}}
4157    
4158     @article{mcdo-etal:03,
4159     Author = {T.J. McDougall and D.R. Jackett and D.G. Wright and R. Fiestel},
4160     Journal = jaot,
4161     Pages = {730--741},
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4163     Volume = {20},
4164     Year = {2003}}
4165    
4166     @article{mcw:96,
4167     Author = {J. McWilliams},
4168     Journal = arfm,
4169     Pages = {215--248},
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4172     Year = {1996}}
4173    
4174     @article{mene-etal:05b,
4175     Author = {D. Menemenlis and I. Fukumori and T. Lee},
4176     Journal = mwr,
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4179     Volume = {133},
4180     Year = {2005b}}
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4182     @article{mene-etal:05a,
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4184     Journal = eos,
4185     Owner = {heimbach},
4186     Pages = {89},
4187     Title = {Towards eddy permitting estimates of the global ocean and sea-ice circulations.},
4188     Volume = {86(9)},
4189     Year = {2005a}}
4190    
4191     @article{mene-zhan:03,
4192     Author = {D. Menemenlis and J. Zhang},
4193     Note = {in preparation},
4194     Title = {Sea ice parameterization in the MITgcm},
4195     Year = {2003}}
4196    
4197     @article{mill-doug:06,
4198     Author = {L. Miller and B.C. Douglas},
4199     Journal = ptrsa,
4200     Pages = {~},
4201     Title = {On the rate and cause of twentieth century sea-level rise},
4202     Volume = {~},
4203     Year = {2006}}
4204    
4205     @article{mill-doug:04,
4206     Author = {L. Miller and B.C. Douglas},
4207     Journal = {Nature},
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4209     Title = {Mass and volume contributions to twentieth-century global sea level rise},
4210     Volume = {428},
4211     Year = {2004}}
4212    
4213     @article{moha-piro:04,
4214     Author = {B. Mohammadi and O. Pironneau},
4215     Doi = {10.1146/annurev.fluid.36.050802.121926},
4216     Journal = arfm,
4217     Owner = {heimbach},
4218     Pages = {255-279},
4219     Title = {Shape optimization in fluid mechanics.},
4220     Volume = {36},
4221     Year = {2004},
4222     Bdsk-Url-1 = {http://dx.doi.org/10.1146/annurev.fluid.36.050802.121926}}
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4224 heimbach 1.2 @article{molt:03,
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4226 heimbach 1.2 Date-Modified = {2009-02-02 12:39:48 -0500},
4227 heimbach 1.1 Journal = {Clim.~Dyn.},
4228     Owner = {heimbach},
4229     Pages = {175--191},
4230     Title = {Atmospheric simulations using a GCM with simplified physical parametrizations. I: Model climatology and variability in multi-decadal experiments.},
4231     Volume = {20},
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4236 heimbach 1.2 Date-Modified = {2009-02-02 12:40:09 -0500},
4237 heimbach 1.1 Journal = qjrms,
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4240     Volume = {119},
4241     Year = {1993}}
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4245 heimbach 1.2 Date-Modified = {2009-02-03 07:02:04 -0500},
4246 heimbach 1.1 Journal = jpo,
4247     Pages = {762--778},
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4249     Volume = {29},
4250     Year = {1999}}
4251    
4252 heimbach 1.2 @article{moor-etal:04,
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4254 heimbach 1.2 Date-Modified = {2009-02-03 07:01:50 -0500},
4255 heimbach 1.1 Journal = omod,
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4258     Volume = {7},
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4260    
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4263 heimbach 1.2 Date-Modified = {2009-02-03 07:44:48 -0500},
4264 heimbach 1.1 Journal = jpo,
4265     Pages = {1682--1702},
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4267     Volume = {23},
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4270 heimbach 1.2 @article{moor-klee:02,
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4272 heimbach 1.2 Date-Modified = {2009-02-03 07:01:35 -0500},
4273 heimbach 1.1 Journal = jclim,
4274     Pages = {138--163},
4275     Title = {The differences between optimal perturbations of coupled models of ENSO},
4276     Volume = {14},
4277     Year = {2002}}
4278    
4279 heimbach 1.2 @article{moor-klee:97b,
4280 heimbach 1.1 Author = {A.M. Moore and R. Kleeman},
4281 heimbach 1.2 Date-Modified = {2009-02-02 22:04:44 -0500},
4282 heimbach 1.1 Journal = qjrms,
4283     Pages = {983--1006},
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4285     Volume = {123},
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4287    
4288 heimbach 1.2 @article{moor-klee:97a,
4289 heimbach 1.1 Author = {A.M. Moore and R. Kleeman},
4290 heimbach 1.2 Date-Modified = {2009-02-02 22:05:05 -0500},
4291 heimbach 1.1 Journal = qjrms,
4292     Pages = {953--981},
4293     Title = {The singular vectors of a coupled ocean-atmosphere model of ENSO. I: Thermodynamics, energetics and error growth},
4294     Volume = {123},
4295     Year = {1997a}}
4296    
4297 heimbach 1.2 @article{moor-klee:96,
4298 heimbach 1.1 Author = {A.M. Moore and R. Kleeman},
4299 heimbach 1.2 Date-Modified = {2009-02-03 07:01:26 -0500},
4300 heimbach 1.1 Journal = qjrms,
4301     Pages = {1405--1446},
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4303     Volume = {122},
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4305    
4306 heimbach 1.2 @article{moor-mari:99,
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4308 heimbach 1.2 Date-Modified = {2009-02-03 07:01:15 -0500},
4309 heimbach 1.1 Journal = jpo,
4310     Pages = {158--176},
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4312     Volume = {29},
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4315 heimbach 1.2 @article{moor-etal:02b,
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4317 heimbach 1.2 Date-Modified = {2009-02-03 07:00:57 -0500},
4318 heimbach 1.1 Journal = jpo,
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4321     Volume = {32},
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4324 heimbach 1.2 @article{moor-etal:03,
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4423     Author = {U. Naumann and P. Heimbach},
4424     Booktitle = {ICCS 2003},
4425     Editor = {{V. Kumar, M. Gavrilova, C.J.K. Tan, P. L'Ecuyer}},
4426     Pages = {105--114},
4427     Publisher = {Springer-Verlag},
4428     Series = {Lecture Notes in Computer Science},
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4435     Booktitle = {European Conference on Computational Fluid Dynamics ECCOMAS CFD 2006},
4436     Editor = {{P. Wesseling, E. O~nate and J. Periaux}},
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4516 heimbach 1.2 Date-Modified = {2009-02-03 07:27:24 -0500},
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4536     Owner = {heimbach},
4537     Timestamp = {2007.07.30},
4538     Title = {ISMIP-HOM: Ice Sheet Model Intercomparison Project. Benchmark experiments for numerical Higher-Order ice sheet Models},
4539     Type = {Technical Report},
4540     Url = {http://homepages.ulb.ac.be/~fpattyn/ismip/},
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4542     Bdsk-Url-1 = {http://homepages.ulb.ac.be/~fpattyn/ismip/}}
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4571     Bdsk-Url-1 = {http://dx.doi.org/10.1175/JPO2843.1}}
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4624     Doi = {doi:10.1029/2007GL029599},
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4627     Pages = {L09603},
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4653     Doi = {10.1175/JPO3010.1},
4654     Journal = jpo,
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4657     Timestamp = {2007.05.08},
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5043     Pages = {257--285},
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5055     Pages = {1529--1532},
5056     Timestamp = {2007.03.22},
5057     Title = {Recent sea-level contributions of the Antarctic and Greenland ice sheets},
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5537     Author = {D.G. Vaughan and R. Arthern},
5538     Doi = {10.1126/science.1141111},
5539     Journal = {Science},
5540     Owner = {heimbach},
5541     Pages = {1503--1504},
5542     Timestamp = {2007.03.22},
5543     Title = {Why is it hard to predict the future of ice sheets?},
5544     Volume = {315},
5545     Year = {2007},
5546     Bdsk-Url-1 = {http://dx.doi.org/10.1126/science.1141111}}
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5549     Author = {Verdy, A. and S. Dutkiewicz and M.J. Follows and J.C. Marshall and A. Czaja},
5550     Date-Modified = {2007-11-30 19:48:22 -0500},
5551     Journal = {Global Biogeochem. Cycles},
5552     Pages = {GB2020},
5553     Title = {Carbon dioxide and oxygen fluxes in the Southern Ocean: Mechanisms for interannual variability},
5554     Volume = {21},
5555     Year = {2007}}
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5557     @article{voss:07,
5558     Author = {F. Vossepoel},
5559     Date-Modified = {2007-09-08 08:28:38 -0400},
5560     Doi = {10.1029/2006JC003891},
5561     Journal = jgr,
5562     Local-Url = {file://localhost/Users/heimbach/PapersLibrary/vossepoel_2006JC003891.pdf},
5563     Owner = {heimbach},
5564     Pages = {C05010},
5565     Timestamp = {2007.02.01},
5566     Title = {Uncertainties in the mean ocean dynamic topography before the launch of the Gravity field and steady-state Ocean Circulation Explorer ({GOCE})},
5567     Volume = {112},
5568     Year = {2007},
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5621     Date-Modified = {2008-04-16 19:20:45 -0400},
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5623     Owner = {heimbach},
5624     Pages = {1815-1846},
5625     Timestamp = {2007.05.07},
5626     Title = {Correlation modelling on the sphere using a generalized diffusion equation},
5627     Volume = {127},
5628     Year = {2001}}
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5655     Address = {Berlin (Germany)},
5656     Author = {D.J. Webb},
5657     Booktitle = {Oceanic circulation models: Combining data and dynamics},
5658     Editor = {{D.L.T. Anderson and J. Willebrand}},
5659     Pages = {233--256},
5660     Publisher = {Springer-Verlag},
5661     Series = {NATO ASI Series},
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5664     Year = {1989}}
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5667     Author = {J. Willis and D. Roemmich and B. Cornuelle},
5668     Doi = {10.1029/2003JC002260},
5669     Journal = jgr,
5670     Owner = {heimbach},
5671     Pages = {C12036},
5672     Title = {Interannual variability in upper ocean heat content, temperature, and thermosteric expansion on global scales},
5673     Volume = {109(C12)},
5674     Year = {2004},
5675     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2003JC002260}}
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5680     Pages = {525-531},
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5683     Year = {2000}}
5684    
5685     @techreport{woa:01,
5686     Address = {Silver Spring (MD), USA},
5687     Author = {M.E. Conkright and R.A. Locarnini and H.E. Garcia and T.D. O'Brien and T.P. Boyer and C. Stephens and J.I. Antonov},
5688     Date-Modified = {2008-04-16 18:11:55 -0400},
5689     Institution = {National Oceanographic Data Center (NOAA/NODC)},
5690     Note = {{\tt http://www.nodc.noaa.gov/OC5/WOA01/}},
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5709     Editor = {{D.L.T. Anderson and J. Willebrand}},
5710     Pages = {1--77},
5711     Publisher = {Springer-Verlag},
5712     Series = {NATO ASI Series},
5713     Title = {Tracer inverse problems},
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5715     Year = {1989}}
5716    
5717     @incollection{wun:90,
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5719     Booktitle = {Quo Vadimus: Geophysics for the Next Century},
5720     Editor = {Garland, G.D. and Apel, J.R.},
5721     Owner = {heimbach},
5722     Title = {Comments on R.W. Stewart's "Physical Oceanography to the End of the Twentieth Century"},
5723     Year = {1990}}
5724    
5725     @incollection{wuns:06b,
5726     Author = {C. Wunsch},
5727     Booktitle = {Physical Oceanography: Developments Since 1950},
5728     Editor = {M. Jochum and R. Murtugudde},
5729     Publisher = {Springer},
5730     Title = {Towards the World Ocean Circulation Experiment and a bit of aftermath},
5731     Year = {2006b}}
5732    
5733     @incollection{wun:94,
5734     Address = {Venezia (I)},
5735     Author = {C. Wunsch},
5736     Booktitle = {The generasl circulation of the oceans},
5737     Editor = {{P. Malanotte-Rizzoli}},
5738     Pages = {9--53},
5739     Publisher = {Instituto Veneto de Scienze, Lettere ed Arti},
5740     Title = {The ocean circulation and climate},
5741     Year = {1994}}
5742    
5743     @incollection{wuns:02b,
5744     Author = {C. Wunsch},
5745     Booktitle = {Meteorology at the Millenium},
5746     Editor = {R.P. Pearce},
5747     Pages = {233--245},
5748     Publisher = {Academic Press},
5749     Title = {Ocean observations and the climate forecast problem},
5750     Year = {2002b}}
5751    
5752     @incollection{wuns:07,
5753     Author = {C. Wunsch},
5754     Booktitle = {Ocean Circulation: Mechanisms and Impacts},
5755     Date-Modified = {2007-10-02 12:02:30 -0400},
5756     Editor = {A. Schmittner, J. Chiang and S. Hemmings},
5757     Local-Url = {file://localhost/Users/heimbach/PapersLibrary/cw_present_pastocean_rev_2april.pdf},
5758     Owner = {heimbach},
5759     Pages = {53--74},
5760     Publisher = {American Geophysical Union},
5761     Series = {AGU Geophysical Monograph Series},
5762     Timestamp = {2007.07.29},
5763     Title = {The past and future ocean circulation from a contemporary perspective},
5764     Volume = {173},
5765     Year = {2007},
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5767 heimbach 1.1
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5769     Address = {Cambridge (UK)},
5770     Author = {C. Wunsch},
5771     Pages = {400 pp.},
5772     Publisher = cup,
5773     Title = {Discrete Inverse and State Estimation Problems : With Geophysical Fluid Applications},
5774     Year = {2006a}}
5775    
5776     @article{wuns:05,
5777     Author = {C. Wunsch},
5778     Journal = jclim,
5779     Pages = {4374--4380},
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5781     Volume = {18},
5782     Year = {2005}}
5783    
5784     @article{wun:03a,
5785     Author = {C. Wunsch},
5786     Journal = {Quaternary Science Reviews},
5787     Pages = {371--385},
5788     Title = {Determining paleoceanographic circulations, with emphasis on the Last Glacial Maximum},
5789     Volume = {22},
5790     Year = {2003a}}
5791    
5792     @article{wun:02a,
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5794     Journal = jgr,
5795     Pages = {10.1029/2001JC000797},
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5797     Volume = {107(C6)},
5798     Year = {2002a}}
5799    
5800     @article{wun:99b,
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5802     Journal = jgr,
5803     Pages = {13,235--13,249},
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5805     Volume = {104, C6},
5806     Year = {1999b}}
5807    
5808     @article{wun:99a,
5809     Author = {C. Wunsch},
5810     Journal = bams,
5811     Pages = {245-255},
5812     Title = {The interpretation of short climate records, with comments on the North Atlantic and Southern Oscillations},
5813     Volume = {80},
5814     Year = {1999a}}
5815    
5816     @book{wuns:96,
5817     Address = {Cambridge (UK)},
5818     Author = {C. Wunsch},
5819     Pages = {442 pp.},
5820     Publisher = cup,
5821     Title = {The ocean circulation inverse problem},
5822     Year = {1996}}
5823    
5824     @article{wuns:88b,
5825     Author = {C. Wunsch},
5826     Journal = jgr,
5827     Pages = {8099--8110},
5828     Title = {Transient tracers as a problem in control theory},
5829     Volume = {93(C7)},
5830     Year = {1988b}}
5831    
5832     @article{wun:88a,
5833     Author = {C. Wunsch},
5834     Journal = ptrsa,
5835     Pages = {201--236},
5836     Title = {An eclectic Atlantic ocean circulation model. Part II: Transient tracers and the ventilation of the Eastern Basin thermocline},
5837     Volume = {325},
5838     Year = {1988a}}
5839    
5840     @article{wuns:84a,
5841     Author = {C. Wunsch},
5842     Journal = jpo,
5843     Pages = {1712--1733},
5844     Title = {An eclectic Atlantic ocean circulation model. Part I: The meridional flux of heat},
5845     Volume = {14},
5846     Year = {1984}}
5847    
5848     @incollection{wuns:84b,
5849     Address = {La Jolla, CA},
5850     Author = {C. Wunsch},
5851     Booktitle = {"It's the water that makes you drunk." A celebration in Geophysics and Oceanography -- 1982. In honor of Walter Munk on his 65th birthday.},
5852     Pages = {47--62},
5853     Publisher = {Scripps Institution of Oceanography, of California, San Diego},
5854     Series = {Scripps Institution of Oceanography Reference Series 84-5},
5855     Title = {Acoustic tomography and other answers},
5856     Year = {1984}}
5857    
5858     @article{wun:77,
5859     Author = {C. Wunsch},
5860     Journal = {Science},
5861     Pages = {871--875},
5862     Title = {Determining the general circulation of the oceans: a preliminary discussion},
5863     Volume = {196},
5864     Year = {1977}}
5865    
5866     @article{wun:67,
5867     Author = {C. Wunsch},
5868     Journal = {Rev.~Geophys.},
5869     Pages = {447--475},
5870     Title = {The long-period tides},
5871     Volume = {5},
5872     Year = {1967}}
5873    
5874     @article{wun-fer:04,
5875     Author = {Wunsch, C. and Ferrari, R.},
5876     Doi = {10.1146/annurev.fluid.36.050802.122121},
5877     Journal = {Annu.~Rev.~Fluid Mech.},
5878     Owner = {heimbach},
5879     Pages = {281--314},
5880     Title = {Vertical mixing, energy, and the general circulation of the oceans},
5881     Volume = {36},
5882     Year = {2004},
5883     Bdsk-Url-1 = {http://dx.doi.org/10.1146/annurev.fluid.36.050802.122121}}
5884    
5885     @article{wun-eta:97,
5886     Author = {C. Wunsch and D.B. Haidvogel and M. Iskandarani and R. Hughes},
5887     Journal = {Prog.~Oceanog.},
5888     Pages = {81--108},
5889     Title = {Dynamics of the long-period tides},
5890     Volume = {40},
5891     Year = {1997}}
5892    
5893     @article{wuns-heim:07,
5894     Author = {C. Wunsch and P. Heimbach},
5895     Journal = {Physica D},
5896     Pages = {197--208},
5897     Title = {Practical global oceanic state estimation},
5898     Volume = {230(1-2)},
5899     Year = {2007}}
5900    
5901     @article{wuns-heim:06,
5902     Author = {Wunsch, C. and Heimbach, P.},
5903     Journal = jpo,
5904     Pages = {2012--2024},
5905     Title = {Estimated Decadal Changes in the North Atlantic Meridional Overturning Circulation and Heat Flux},
5906     Volume = {36(11)},
5907     Year = {2006}}
5908    
5909     @article{wun-min:82,
5910     Author = {C. Wunsch and J.F. Minster},
5911     Journal = jgr,
5912     Pages = {5647--5662},
5913     Title = {Methods for box models and ocean circulation tracers: mathematical programming and nonlinear inverse theory},
5914     Volume = {C87},
5915     Year = {1982}}
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5917     @article{wuns-etal:07,
5918     Author = {C. Wunsch and R. Ponte and P. Heimbach},
5919     Date-Modified = {2007-11-19 11:11:02 -0500},
5920     Journal = {J. Clim.},
5921     Pages = {5889-5911},
5922     Title = {Decadal trends in sea level patterns},
5923     Volume = {20(24)},
5924     Year = {2007}}
5925    
5926     @article{wun-sta:98,
5927     Author = {C. Wunsch and D. Stammer},
5928     Journal = {Annu. Rev. Earth Planet. Sci.},
5929     Pages = {219--253},
5930     Title = {Satellite altimetry, the marine geoid, and the oceanic general circulation},
5931     Volume = {26},
5932     Year = {1998}}
5933    
5934     @article{wun-sta:97,
5935     Author = {C. Wunsch and D. Stammer},
5936     Journal = {Rev.~Geophys.},
5937     Pages = {79--107},
5938     Title = {Atmospheric loading and the oceanic "inverted barometer" effect},
5939     Volume = {35},
5940     Year = {1997}}
5941    
5942     @article{yao-sto:87,
5943     Author = {M.S. Yao and P.H. Stone},
5944     Journal = jas,
5945     Owner = {heimbach},
5946     Pages = {65--82},
5947     Title = {Development of a two-dimensional zonally averaged statistical-dynamical model. Part I: The parameterization of moist convection and its role in the general circulation.},
5948     Volume = {44},
5949     Year = {1987}}
5950    
5951     @article{yare-etal:01,
5952     Author = {A.I. Yaremchuk and M. Yaremchuk and J. Schr\"oter and M. Losch},
5953     Journal = {Ocean Dynamics},
5954     Pages = {71--78},
5955     Title = {Local stability and estimation of uncertainty for inverse problem solvers},
5956     Volume = {54},
5957     Year = {2001}}
5958    
5959     @article{yare-maxi:02,
5960     Author = {Yaremchuk, M. I. and N. A. Maximenko},
5961     Doi = {10.1029/2002JC0013790},
5962     Journal = jgr,
5963     Pages = {3223},
5964     Title = {A dynamically consistent analysis of the mesoscale eddy field at the western North Pacific Subarctic Front},
5965     Volume = {107(C12)},
5966     Year = {2002},
5967     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2002JC0013790}}
5968    
5969     @article{yell-tayl:96,
5970     Author = {M. Yelland and P.K. Taylor},
5971     Journal = jpo,
5972     Owner = {heimbach},
5973     Pages = {541--558},
5974     Timestamp = {2007.08.11},
5975     Title = {Wind stress measurements from the open ocean},
5976     Volume = {26},
5977     Year = {1996}}
5978    
5979     @article{zann-tzip:05,
5980     Author = {L. Zanna and E. Tziperman},
5981     Journal = jpo,
5982     Pages = {1593--1605},
5983     Title = {Non normal amplification of thermohaline circulation anomalies},
5984     Volume = {35(9)},
5985     Year = {2005}}
5986    
5987     @article{zhai-grea:07,
5988     Author = {X. Zhai and R.J. Greatbatch},
5989     Doi = {10.1029/2006GL028907},
5990     Journal = {GRL},
5991     Owner = {heimbach},
5992     Pages = {L04606},
5993     Timestamp = {2007.05.07},
5994     Title = {Wind work in a model of th northwest Atlantic Ocean},
5995     Volume = {34},
5996     Year = {2007},
5997     Bdsk-Url-1 = {http://dx.doi.org/10.1029/2006GL028907}}
5998    
5999     @article{zhan-hibl:97,
6000     Author = {J. Zhang and W. D. {Hibler III}},
6001     Journal = jgr,
6002     Owner = {heimbach},
6003     Pages = {8691--8702},
6004     Title = {On an efficient numerical method for modeling sea ice dynamics},
6005     Volume = {102},
6006     Year = {1997}}
6007    
6008     @article{zhan-etal:98,
6009     Author = {J. Zhang and W. D. {Hibler III} and M. Steele and D. A. Rothrock},
6010     Journal = jpo,
6011     Owner = {heimbach},
6012     Pages = {191--217},
6013     Title = {Arctic ice-ocean modeling with and without climate restoring},
6014     Volume = {28},
6015     Year = {1998}}
6016    
6017     @article{zha-rot:03,
6018     Author = {J. Zhang and D. A. Rothrock},
6019     Journal = mwr,
6020     Pages = {681--697},
6021     Title = {Modeling global sea ice with a thickness and enthalpy distribution model in generalized curvilinear coordinates},
6022     Volume = {131(5)},
6023     Year = {2003}}
6024    
6025     @article{zha-rot:00,
6026     Author = {J. Zhang and D. A. Rothrock},
6027     Journal = jgr,
6028     Owner = {heimbach},
6029     Pages = {3325},
6030     Title = {Modeling arctic sea ice with an efficient plastic solution},
6031     Volume = {105},
6032     Year = {2000}}
6033    
6034     @article{zha-mar:99,
6035     Author = {K.Q. Zhang and J. Marotzke},
6036     Journal = {J.~Marine Res.},
6037     Pages = {305--334},
6038     Title = {The importance of open-boundary estimation for an Indian Ocean GCM-data synthesis},
6039     Volume = {57},
6040     Year = {1999}}
6041    
6042     @article{zou-eta:93,
6043     Author = {X. Zou and I. Navon and A. Barcilon and J. Whittaker and D. Caccuci},
6044     Journal = mwr,
6045     Pages = {2833--2857},
6046     Title = {An adjoint sensitivity study of blocking in a two-layer isentropic model},
6047     Volume = {121},
6048     Year = {1993}}
6049    
6050     @proceedings{beu-eta:03,
6051     Editor = {Beutler, G. and Drinkwater, M.R. and Rummel, R. and {von Steiger}, R.},
6052     Note = {Reprinted from Space Science Reviews, Vol. 108, Nos. 1-2, 2003},
6053     Organization = {ISSI},
6054     Owner = {heimbach},
6055     Publisher = {Kluwer},
6056     Series = {Space Science Series of ISSI},
6057     Title = {Earth gravity field from space -- from sensors to Earth sciences},
6058     Volume = {17},
6059     Year = {2003}}
6060    
6061     @book{fu-caze:01,
6062     Address = {San Diego},
6063     Editor = {L.-L. Fu and A. Cazenave},
6064     Pages = {463 pp.},
6065     Publisher = {Academic Press},
6066     Title = {Satellite Altimetry and Earth Sciences. A Handbook of Techniques and Applications.},
6067     Year = {2001}}
6068 heimbach 1.2
6069     @article{Charpentier2009Fho,
6070     Ad_Theotech = {Forward Mode, Higher Order, Taylor Arithmetic},
6071     Ad_Tools = {Rapsodia},
6072     Address = {Bristol, PA, USA},
6073     Author = {Isabelle Charpentier and Jean Utke},
6074     Doi = {http://dx.doi.org/10.1080/10556780802413769},
6075     Issn = {1055-6788},
6076     Journal = {Optimization Methods Software},
6077     Number = {1},
6078     Pages = {1--14},
6079     Publisher = {Taylor \& Francis, Inc.},
6080     Title = {Fast higher-order derivative tensors with {R}apsodia},
6081     Volume = {24},
6082     Year = {2009},
6083     Bdsk-Url-1 = {http://dx.doi.org/10.1080/10556780802413769}}
6084    
6085     @article{Bischof1992AGD,
6086     Ad_Tools = {ADIFOR},
6087     Author = {Christian H. Bischof and Alan Carle and George F. Corliss and Andreas Griewank and Paul D. Hovland},
6088     Comment = {ADIFOR Working Note \# 1. Also appeared as Preprint MCS--P263--0991, Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Ill., September 1991, and as Technical Report 91185, Center for Research in Parallel Computation, Rice University, Houston, Tex., 1991.},
6089     Journal = {Scientific Programming},
6090     Number = {1},
6091     Pages = {11--29},
6092     Referred = {[Bischof1991UAt]; [Bisc91h].},
6093     Title = {{ADIFOR}: {G}enerating Derivative Codes from {F}ortran Programs},
6094     Volume = {1},
6095     Year = {1992}}
6096    
6097     @article{Griewank1996AAC,
6098     Abstract = {The C++ package ADOL-C described here facilitates the evaluation of first and
6099     higher derivatives of vector functions that are defined by computer programs written in C or C++.
6100     The resulting derivative evaluation routines may be called from C/C++, Fortran, or any other
6101     language that can be linked with C. The numerical values of derivative vectors are obtained free of
6102     truncation errors at a small multiple of the run-time and randomly accessed memory of the given
6103     function evaluation program. Derivative matrices are obtained by columns or rows. For solution
6104     curves defined by ordinary differential equations, special routines are provided that evaluate the
6105     Taylor coefficient vectors and their Jacobians with respect to the current state vector. The
6106     derivative calculations involve a possibly substantial (but always predictable) amount of data that
6107     are accessed strictly sequentially and are therefore automatically paged out to external files.},
6108     Ad_Theotech = {Hessian, Reverse Mode, Taylor Arithmetic, Forward Mode},
6109     Ad_Tools = {ADOL-C},
6110     Author = {Andreas Griewank and David Juedes and Jean Utke},
6111     Bibsource = {http://www.acm.org/pubs/contents/journals/toms/},
6112     Coden = {ACMSCU},
6113     Comment = {Also appeared as Preprint MCS--P180--1190, Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Ill., November 1990.},
6114     Issn = {0098-3500},
6115     Journal = {{ACM} Transactions on Mathematical Software},
6116     Keywords = {algorithms; performance},
6117     Number = {2},
6118     Pages = {131--167},
6119     Subject = {{\bf G.1.4}: Mathematics of Computing, NUMERICAL ANALYSIS, Quadrature and Numerical Differentiation. {\bf I.1.2}: Computing Methodologies, ALGEBRAIC MANIPULATION, Algorithms, Analysis of algorithms. {\bf I.1.2}: Computing Methodologies, ALGEBRAIC MANIPULATION, Algorithms.},
6120     Title = {{Algorithm 755}: {ADOL-C}: A Package for the Automatic Differentiation of Algorithms Written in {C\slash C++}},
6121     Url = {ftp://info.mcs.anl.gov/pub/tech_reports/reports/TM162.ps},
6122     Volume = {22},
6123     Year = {1996},
6124     Bdsk-Url-1 = {ftp://info.mcs.anl.gov/pub/tech_reports/reports/TM162.ps}}

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