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1 mlosch 1.3 % , PETSc Users Manual,
2     % Technical Report ANL-95/11 - Revision 2.1.3, Argonne National Laboratory, 2002
3 heimbach 1.1 @Book{Bertsekas:1982,
4     author = {D. P. Bertsekas},
5     title = {Constrained Optimization and {L}agrange Multiplier
6     Methods},
7     publisher = {Academic Press},
8     year = 1982,
9     address = {London}
10     }
11    
12     @techreport{Giering96a,
13     author = "Ralf Giering and Thomas Kaminski",
14     title = "{R}ecipes for {A}djoint {C}ode {C}onstruction",
15     institution = {Max-Planck-Institut f\"ur Meteorologie},
16     number = 212,
17     year = 1996
18     }
19    
20     @manual{Giering97a,
21     author = "Ralf Giering",
22     title = "{T}angent linear and {A}djoint {M}odel {C}ompiler,
23     Users manual 1.2",
24     electronic = "http://puddle.mit.edu/~ralf/tamc",
25     year = 1997
26     }
27    
28     @manual{Giering99a,
29     author = "Ralf Giering",
30     title = "{T}angent linear and {A}djoint {M}odel {C}ompiler,
31     Users manual 1.4",
32     electronic = "http://puddle.mit.edu/~ralf/tamc",
33     year = 1999
34     }
35    
36     @manual{Giering99b,
37     author = {Ralf Giering},
38     title = {{T}angent linear and {A}djoint {M}odel {C}ompiler,
39     Users manual 1.4},
40     note = {{\newline
41     http://puddle.mit.edu/$\sim$ralf/tamc}},
42     year = 1999
43     }
44    
45     @Book{Hamming:1987,
46     author = "Richard W. Hamming",
47     title = "Digitale Filter",
48     publisher = "VCH Verlagsgesellschaft",
49     year = 1987,
50     address = "Weinheim, Germany"
51     }
52    
53     @Book{Kreyszik:1978,
54     author = {Erwin Kreyszig},
55     title = {Introductory Functional Analysis with Applications},
56     publisher = {John Wiley \& Sons},
57     year = 1978,
58     address = {New York}
59     }
60    
61     @Book{Kulhanek:1976,
62     author = "Ota Kulh{\'a}nek",
63     title = "Introduction to Digital Filtering in Geophysics",
64     publisher = "Elsevier Scientific Publishing Company",
65     year = 1976,
66     address = "Amsterdam--Oxford--New York"
67     }
68    
69     @Book{Lanczos:1961,
70     author = {C. Lanczos},
71     title = {Linear Differential Operators},
72     publisher = {Van Nostrand, Reinhold},
73     year = 1961,
74     address = {New York}
75     }
76    
77     @BOOK(Lapack,
78     AUTHOR = "E. Anderson and Z. Bai and C. Bischof and J. Demmel and others",
79     TITLE = "LAPACK user's guide",
80     PUBLISHER = "Society for Industrial and Applied Mathematics",
81     ADDRESS = "Philadelphia",
82     YEAR = 1992 )
83    
84     @Book{Reed:1970,
85     author = {Micheal Reed and Barry Simon},
86     title = {Functional Analysis},
87     publisher = {Academic Press, Inc.},
88     year = 1970,
89     address = {San Diego}
90     }
91    
92     @Article{Sasaki:1970,
93     author = {Yohikazu Sasaki},
94     title = {Some Basic Formalisms in Numerical Variational
95     Analysis},
96     journal = mwr,
97     year = 1970,
98     volume = 98,
99     number = 12,
100     pages = {875--883}
101     }
102    
103 mlosch 1.3 @TechReport{balay02,
104     author = {Satish Balay and William D. Gropp and Lois Curfman
105     McInnes and Barry F. Smith},
106     title = {{PETSc} {U}sers {M}anual},
107     institution = {Argonne National Laboratory},
108     year = {2002},
109     OPTkey = {},
110     OPTtype = {},
111     number = {ANL-95/11 -- Revision 2.1.3},
112     OPTaddress = {},
113     OPTmonth = {},
114     OPTnote = {},
115     OPTannote = {}
116     }
117    
118 heimbach 1.1 @Article{barber96:_qhull,
119     author = {C. B. Barber and D.P. Dobkin and H.T. Huhdanpaa},
120     title = {The Quickhull Algorithm for Convex Hulls},
121     journal = toms,
122     year = 1996,
123     volume = 22,
124     number = 4,
125     pages = {469--483}
126     }
127    
128     @Book{bronstein91,
129     author = {{Il'ja} N. Bronstein and Konstantin A. Semendjajew},
130     title = {Taschenbuch der Mathematik},
131     publisher = {B. G. Teubner Verlagsgesellschaft},
132     year = 1991,
133     address = {Stuttgart},
134     edition = 25,
135     pages = 824
136     }
137    
138     @BOOK(courant,
139     AUTHOR = "Richard Courant and David Hilbert",
140     TITLE = "Methoden der Mathematischen Physik {I}",
141     PUBLISHER = "Springer",
142     ADDRESS = "Berlin",
143     PAGES = 469,
144     YEAR = 1968 )
145    
146     @Article{daru04,
147     author = {H. Daru and C. Tenaud},
148     title = {High Order One-Step Monotonicity-Preserving Schemes
149     for Unsteady Compressible Flow Calculations},
150     journal = jcp,
151     year = 2004,
152     volume = 193,
153     pages = {563--594}
154     }
155    
156     @BOOK(fischer,
157     AUTHOR = "Gerd Fischer",
158     TITLE = "Lineare Algebra",
159     PUBLISHER = "Vieweg",
160     ADDRESS = "Braunschweig, Wiesbaden",
161     YEAR = 1989 )
162    
163     @Book{fischer89,
164     author = {Gerd Fischer},
165     title = {Lineare Algebra},
166     publisher = {Vieweg},
167     year = 1989,
168     pages = 248,
169     address = {Braunschweig, Wiesbaden}
170     }
171    
172     @BOOK(fox,
173     AUTHOR = "Fox, L.",
174     TITLE = "Numerical Solution of Ordinary and Partial Differential Equations",
175     PUBLISHER = "Pergamon Press",
176     ADDRESS = "New York",
177     PAGES = "303 ff.",
178     YEAR = 1962 )
179    
180     @InProceedings{giering01,
181     author = {Ralf Giering and Thomas Kaminski},
182     title = {Generating recomputations in reverse mode {AD}},
183     booktitle = {Automatic Differentiation 2000: From Simulation to
184     Optimization},
185     OPTcrossref = {},
186     OPTkey = {},
187     OPTpages = {},
188     OPTyear = {},
189     OPTeditor = {},
190     OPTvolume = {},
191     OPTnumber = {},
192     OPTseries = {},
193     OPTaddress = {},
194     OPTmonth = {},
195     OPTorganization ={},
196     OPTpublisher = {Springer Verlag},
197     OPTnote = {},
198     OPTannote = {}
199     }
200    
201     @Unpublished{giering01:_taf_manual,
202     author = {Ralf Giering and Thomas Kaminski},
203     title = {{TAF} Manual},
204     note = {{F}ast{O}pt, Hamburg},
205     year = 2001
206     }
207    
208     &Article{ayaremch:1998,
209     author = "Alexey I. Yaremchuk and Jens Schr{\"o}ter",
210     title = "Spectral Analysis of Symmetric Operators:
211     Application to the {L}aplace Tidal Model",
212     journal = jcp,
213     year = 1998,
214     volume = 147,
215     pages = "1--21"
216     }
217    
218     @Article{giering98,
219     author = {Ralf Giering and Thomas Kaminski},
220     title = {Recipes for Adjoint Code Construction},
221     journal = toms,
222     year = 1998,
223     volume = 24,
224     number = 4,
225     pdf = {http://www.FastOpt.com/papers/racc.pdf},
226     pages = {437--474}
227     }
228    
229     @ARTICLE{gilbert:89,
230     AUTHOR = "Jean Charles Gilbert and Claude Lemar{\'e}chal",
231     TITLE = "Some Numerical Experiments with Variable-storage
232     Quasi-{N}ewton Algorithms",
233     JOURNAL = "Mathematical Programming",
234     VOLUME = "45",
235     PAGES = "407--435",
236     YEAR = 1989
237     }
238    
239     @InProceedings{giles02,
240     author = {Micheal B. Giles},
241     title = {On the iterative solution of adjoint equations},
242     booktitle = {Automatic Differentiation of Algorithms: From
243     Simulation to Optimization},
244     pages = {145--152},
245     year = 2002,
246     editor = {G. Corliss and C. Faure and A. Griewank and
247     L. Hascoet and U. Naumann},
248     publisher = {Springer-Verlag}
249     }
250    
251     @Book{gill88:_pract_optim,
252     author = {Philip E. Gill and Walter Murray and Margaret H. Wright},
253     title = {Practial Optimization},
254     publisher = {Academic Press, Inc.},
255     year = 1988,
256     address = {London}
257     }
258    
259     @Book{goldberg89,
260     author = {David Goldberg},
261     title = {Genetic Algorithms in Search, Optimization and
262     Machine Learning},
263     publisher = {Addision-Wesley},
264     year = 1989
265     }
266    
267     @Article{gordon93,
268     author = {N. Gordon and D. Salmond and A. Smith},
269     title = {Novel approach to nonlinear/non-{G}aussian
270     {B}ayesian state estimation},
271     journal = {IEEE Proceedings, Part F},
272     year = 1993,
273     volume = 140,
274     pages = {107--113}
275     }
276    
277     @Book{griewank00,
278     title = {Evaluating Derivatives. Principles and Techniques of
279     Algorithmic Differentiation},
280     publisher = {SIAM},
281     year = {2000},
282     author = {A. Griewank},
283     volume = {19},
284     series = {Frontiers in Applied Mathematics},
285     address = {Philadelphia},
286     pages = {369},
287     }
288    
289     @Article{hundsdorfer94,
290     author = {Willem Hundsdorfer and R. A. Trompert},
291     title = {Method of Lines and Direct Discretization: a
292     Comparison for Linear Advection},
293     journal = {Applied Numerical Mathematics},
294     year = 1994,
295     volume = 13,
296     number = 6,
297     pages = {469--490},
298 mlosch 1.2 doi = {10.1016/0168-9274(94)90009-4}
299 heimbach 1.1 }
300    
301     @Article{hundsdorfer95,
302     author = {Willem Hundsdorfer and B. Koren and M. van Loon and
303     J. Verwer},
304     title = {A Positive Finite-Difference Advection Scheme},
305     journal = jcp,
306     year = 1995,
307     volume = 117,
308     number = 1,
309     pages = {35--46}
310     }
311    
312     @Book{kelley99,
313     author = {Carl T. Kelley},
314     title = {Iterative Methods for Optimization},
315     publisher = {SIAM},
316     year = 1999,
317     number = 18,
318     series = {Frontiers in Applied Mathematics},
319     address = {Philadelphia},
320     pages = 180
321     }
322    
323     @BOOK(linpack,
324     AUTHOR = "Dongarra, J. J. and J. R. Bunch and C. B. Moder and G. W. Stewart",
325     TITLE = "LINPACK users' guide",
326     PUBLISHER = "SIAM",
327     ADDRESS = "Philadelphia",
328     YEAR = 1979 )
329    
330 mlosch 1.3 @Article{loehner87,
331     author = {R. L{\"o}hner and K. Morgan and J. Peraire and
332     M. Vahdati},
333     title = {Finite element flux-corrected transport ({FEM-FCT})
334     for the {E}uler and {N}avier-{S}tokes equations},
335     journal = ijnmf,
336     year = 1987,
337     volume = 7,
338     pages = {1093--1109}
339     }
340    
341 heimbach 1.1 @Book{mathews64,
342     author = {Jon Mathews and Robert L. Walker},
343     title = {Mathematical Methods of Physics},
344     publisher = {Addison-Wesley Publishing Company},
345     year = 1964,
346     pages = 501
347     }
348    
349     @BOOK(menke,
350     AUTHOR = "William Menke",
351     TITLE = "Geophysical Data Analysis: Discrete Inverse Theory",
352     PUBLISHER = "International Geophysics Series; 45. Academic Press",
353     ADDRESS = "San Diego",
354     PAGES = "289 p.",
355     YEAR = 1989 )
356    
357     @ARTICLE(paige:82,
358     AUTHOR = "C. C. Paige and M. A. Saunders",
359     TITLE = "{LSQR}: {A}n Algorithm for Sparse Linear Equations Sparse
360     Least Squares",
361     JOURNAL = "Association for Computing Machinery Transactions
362     on Mathematical Software",
363     VOLUME = 8,
364     NUMBER = 1,
365     PAGES = "43-71",
366     YEAR = 1982 )
367    
368     @Book{preisendorfer,
369     author = "Rudolph W. Preisendorfer",
370     title = "Principal Component Analysis in Meteorology and
371     Oceanography",
372     publisher = "Elsevier Science Publishing Company Inc.",
373     year = 1988,
374     address = "New York"
375     }
376    
377     @BOOK{recipes,
378     AUTHOR = "William H. Press and Saul A. Teukolsky and William
379     T. Vetterling and Brian P. Flannery",
380     TITLE = "Numerical Recipes in Fortran",
381     PUBLISHER = "Cambridge University Press",
382     ADDRESS = "New York",
383     PAGES = 963,
384     YEAR = 1992
385     }
386    
387     @InCollection{roe85,
388     author = {P. Roe},
389     title = {Some contributions to the modelling of discontinuous
390     flows},
391     booktitle = {Large-Scale Computations in Fluid Mechanics},
392     pages = {163--193},
393     publisher = {American Mathematical Society},
394     year = 1985,
395     editor = {B. Engquist and S. Osher and R. Somerville},
396     volume = 22,
397     series = {Lectures in Applied Mathematics}
398     }
399    
400     @Book{schwarz,
401     author = {Hans Rudolf Schwarz},
402     title = {Numerische Mathematik},
403     publisher = {Teubner},
404     year = 1988,
405     address = {Stuttgart}
406     }
407    
408     @BOOK(stoer,
409     AUTHOR = "Stoer, Joseph",
410     TITLE = "Einf{\"u}hrung in die Numerische Mathematik I",
411     PUBLISHER = "Springer Verlag",
412     ADDRESS = "Heidelberg Berlin",
413     PAGES = "303 ff.",
414     YEAR = 1973 )
415    
416     @BOOK(tarantola,
417     AUTHOR = "Albert Tarantola",
418     TITLE = "Inverse Problem Theory",
419     PUBLISHER = "Elsevier Scientific Publishing Company",
420     ADDRESS = "Amsterdam",
421     PAGES = "613",
422     YEAR = 1988 )
423    
424     @BOOK{templates,
425     AUTHOR = {R. Barrett and M. Berry and T. F. Chan and J. Demmel
426     and J. Donato and J. Dongarra and V. Eijkhout and
427     R. Pozo and C. Romine and H. Van der Vorst },
428     TITLE = {Templates for the Solution of Linear Systems:
429     Building Blocks for Iterative Methods, 2nd Edition},
430     PUBLISHER = {SIAM},
431     YEAR = {1994},
432     ADDRESS = {Philadelphia, PA}
433     }
434    
435     @BOOK(thiebaux:94,
436     AUTHOR = "H. Jean Thi\'ebaux",
437     TITLE = "Statistical Data Analysis for Ocean and Atmospheric
438     Sciences",
439     PUBLISHER = "Academic Press",
440     ADDRESS = "San Diego",
441     PAGES = "247 pp.",
442     YEAR = 1994
443     )
444    
445     @Article{yaremch01:_local_stabil,
446     author = {Alexey Yaremchuk and Maxim Yaremchuk and Jens Schr{\"o}ter
447     and Martin Losch},
448     title = {Local Stability and Estimation of Uncertainty for
449     Solutions to Inverse Problems},
450     journal = {Ocean Dynamics},
451     year = 2002,
452     volume = 52,
453     number = 2,
454     pages = {71--78}
455     }
456    
457     @Article{yaremch02:_local_stabil,
458     author = {Alexey Yaremchuk and Maxim Yaremchuk and Jens Schr{\"o}ter
459     and Martin Losch},
460     title = {Local Stability and Estimation of Uncertainty for
461     Solutions to Inverse Problems},
462     journal = {Ocean Dynamics},
463     year = 2002,
464     volume = 52,
465     number = 2,
466     pages = {71--78}
467     }
468    
469     @Article{yaremchuk98:_spect_analy_symmet_operat,
470     author = "Alexey I. Yaremchuk and Jens Schr{\"o}ter",
471     title = "Spectral Analysis of Symmetric Operators:
472     Application to the {L}aplace Tidal Model",
473     journal = jcp,
474     year = 1998,
475     volume = 147,
476     pages = "1--21"
477     }
478    

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