| 1 |
update input/data from run/input |
| 2 |
copy run_template_cube81/runoff1p2472-360x180x12.bin to skylla |
| 3 |
|
| 4 |
DM 9-Jul-2015 |
| 5 |
Instructions for running the Nguyen et al 2011 configuration |
| 6 |
with checkpoint65m (2015/06/15) on pleiades |
| 7 |
|
| 8 |
-> get a copy of ftp://ecco2.jpl.nasa.gov/data6/arctic/run_template_cube81 |
| 9 |
also available on pfe:/nobackup/dmenemen/arctic18km/run_template_cube81 |
| 10 |
and harbor.mit.edu:/net/nares/raid8/ecco-shared/arctic18km/run_template_cube81 |
| 11 |
|
| 12 |
-> get a copy of ftp://ecco2.jpl.nasa.gov/data2/data/atmos/jra25 |
| 13 |
also available on pfe:/nobackup/hzhang1/forcing/jra25 |
| 14 |
|
| 15 |
cvs co MITgcm_contrib/arctic/cs_18km |
| 16 |
cvs co -r checkpoint65m MITgcm_code |
| 17 |
cd MITgcm |
| 18 |
mkdir build run |
| 19 |
cd build |
| 20 |
module purge |
| 21 |
module load comp-intel/2015.0.090 mpi-sgi/mpt.2.11r13 netcdf/4.0 |
| 22 |
../tools/genmake2 -of ../tools/build_options/linux_amd64_ifort+mpi_ice_nas -mods ../../MITgcm_contrib/arctic/cs_18km/code |
| 23 |
make depend |
| 24 |
make -j 16 |
| 25 |
|
| 26 |
cd ../run |
| 27 |
cp ../../MITgcm_contrib/arctic/cs_18km/input/* . |
| 28 |
rm data.obcs_* |
| 29 |
ln -sf ../../run_template_cube81/*.bin . |
| 30 |
ln -sf ../../run_template_cube81/BATHY_cube81_420x384_arctic . |
| 31 |
ln -sf ../../run_template_cube81/WOA05_* . |
| 32 |
ln -sf ../../run_template_cube81/*cube81 . |
| 33 |
ln -sf ../../run_template_cube81/+ob1979_2014_merge/* . |
| 34 |
ln -sf ../../jra25/jra25_*_199[1-9] . |
| 35 |
ln -sf ../../jra25/jra25_*_2* . |
| 36 |
rm jra25_rain_n* |
| 37 |
ln -sf ../build/mitgcmuv . |
| 38 |
qsub run_arctic_cs_18km_nas |
| 39 |
|
| 40 |
=============== |
| 41 |
|
| 42 |
ATN 23-Dec-2013 |
| 43 |
|
| 44 |
SEAICE_OPTIONS.h_atn_May2011: Paper: Nguyen et al 2011 |
| 45 |
|
| 46 |
Cpp_OPTIONS.h_oldcode_before2012: code similar to what is used in Nguyen et al 2011, but compatible with codes around Sep2011 |
| 47 |
SEAICE_OPTIONS.h_Ian_Sep2011: Equivalence to above but updated to be compatible with Ian's code on that date |
| 48 |
|
| 49 |
After 2011, pkg/seaice has updated significantly with the merge of Ian's code into the main branch. |
| 50 |
These followings _phAug2012 files include appropriate flag adjustments + param name change for new code. |
| 51 |
They should reproduce almost identical results to Nguyen et al 2011 paper, except for whatever that has |
| 52 |
improved in ocean/sea-ice physics. An offline comparison done by ATN on Aug2012 showed the two runs Aug2012 |
| 53 |
and Nguyen et al 2011 papers are VERY close to each other, thus ATN considered the two solutions are equivalent. |
| 54 |
|
| 55 |
CPP_OPTIONS.h_phAug2012 |
| 56 |
SEAICE_OPTIONS.h_phAug2012 |
| 57 |
|
| 58 |
To run this set up, use binary inputs from: |
| 59 |
ftp://ecco2.jpl.nasa.gov/data6/arctic/run_template_cube81/ |
| 60 |
obcs for the years 1979--2014: +ob1979_2014_merge |
| 61 |
|
| 62 |
There are two bathymetries: |
| 63 |
1) original from Nguyen et al 2011: BATHY_cube81_420x384_arctic |
| 64 |
2) an updated version to blank out some CAA passages (set bathymetry to zero) |
| 65 |
because 18km can not resolve these passages resutling in excessive sea ice thickness |
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